RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 EML5Q05BV3 1969 aa12.32□□□□□ -0.44
ARHGEF28-212ENST00000513042 TRBV7-7A0A0K0K1E9 115 aa12.31□□□□□ -0.44
ARHGEF28-212ENST00000513042 ARHGAP32A7KAX9 2087 aa12.3□□□□□ -0.44
ARHGEF28-212ENST00000513042 FAM208BQ5VWN6 2430 aa12.3□□□□□ -0.44
ARHGEF28-212ENST00000513042 LYPD5Q6UWN5 251 aa12.29□□□□□ -0.44
ARHGEF28-212ENST00000513042 PRLHP81277 87 aa12.29□□□□□ -0.44
ARHGEF28-212ENST00000513042 A0A096LNJ9 63 aa12.28□□□□□ -0.44
ARHGEF28-212ENST00000513042 CRYGAP11844 174 aa12.28□□□□□ -0.44
ARHGEF28-212ENST00000513042 PTPRSQ13332 1948 aa12.28□□□□□ -0.44
ARHGEF28-212ENST00000513042 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
ARHGEF28-212ENST00000513042 Q6ZRU5 148 aa12.27□□□□□ -0.45
ARHGEF28-212ENST00000513042 EXPH5Q8NEV8 1989 aa12.27□□□□□ -0.45
ARHGEF28-212ENST00000513042 A0A1W2PPR1 153 aa12.26□□□□□ -0.45
ARHGEF28-212ENST00000513042 HCG22E2RYF7 251 aa12.26□□□□□ -0.45
ARHGEF28-212ENST00000513042 Q9UF83 564 aa12.26□□□□□ -0.45
ARHGEF28-212ENST00000513042 CPAMD8Q8IZJ3 1885 aa12.26□□□□□ -0.45
ARHGEF28-212ENST00000513042 PLXNB1O43157 2135 aa12.25□□□□□ -0.45
ARHGEF28-212ENST00000513042 LRP4O75096 1905 aa12.25□□□□□ -0.45
ARHGEF28-212ENST00000513042 C16orf95Q9H693 158 aa12.25□□□□□ -0.45
ARHGEF28-212ENST00000513042 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
ARHGEF28-212ENST00000513042 C1orf134Q5TEV5 83 aa12.23□□□□□ -0.45
ARHGEF28-212ENST00000513042 LINC00846Q9NV44 126 aa12.23□□□□□ -0.45
ARHGEF28-212ENST00000513042 MUC6Q6W4X9 2439 aa12.22□□□□□ -0.45
ARHGEF28-212ENST00000513042 WNK1Q9H4A3 2382 aa12.21□□□□□ -0.45
ARHGEF28-212ENST00000513042 C2orf48Q96LS8 159 aa12.21□□□□□ -0.46
ARHGEF28-212ENST00000513042 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
ARHGEF28-212ENST00000513042 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
ARHGEF28-212ENST00000513042 SMCR5Q8TEV8 140 aa12.18□□□□□ -0.46
ARHGEF28-212ENST00000513042 C22orf24Q9Y442 160 aa12.18□□□□□ -0.46
ARHGEF28-212ENST00000513042 TMEM254Q8TBM7 123 aa12.17□□□□□ -0.46
ARHGEF28-212ENST00000513042 SMIM29Q86T20 159 aa12.17□□□□□ -0.46
ARHGEF28-212ENST00000513042 COX8CQ7Z4L0 72 aa12.16□□□□□ -0.46
ARHGEF28-212ENST00000513042 IGKV2D-30A0A075B6S6 120 aa12.15□□□□□ -0.46
ARHGEF28-212ENST00000513042 IGKV2-30P06310 120 aa12.15□□□□□ -0.46
ARHGEF28-212ENST00000513042 KIAA0087Q14695 138 aa12.15□□□□□ -0.46
ARHGEF28-212ENST00000513042 COL5A1P20908 1838 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF28-212ENST00000513042 ADAMTS20P59510 1910 aa12.15□□□□□ -0.47
ARHGEF28-212ENST00000513042 C1orf64Q8NEQ6 169 aa12.14□□□□□ -0.47
ARHGEF28-212ENST00000513042 SORL1Q92673 2214 aa12.13□□□□□ -0.47
ARHGEF28-212ENST00000513042 F8WDY8 70 aa12.13□□□□□ -0.47
ARHGEF28-212ENST00000513042 C7orf65Q6ZTY9 151 aa12.13□□□□□ -0.47
ARHGEF28-212ENST00000513042 OTOGLQ3ZCN5 2332 aa12.13□□□□□ -0.47
ARHGEF28-212ENST00000513042 FSHBP01225 129 aa12.09□□□□□ -0.47
ARHGEF28-212ENST00000513042 FHL3Q13643 280 aa12.09□□□□□ -0.47
ARHGEF28-212ENST00000513042 LINC01561Q8N1V8 128 aa12.09□□□□□ -0.47
ARHGEF28-212ENST00000513042 LIMD2Q9BT23 127 aa12.09□□□□□ -0.47
ARHGEF28-212ENST00000513042 SPATA3Q8NHX4 192 aa12.08□□□□□ -0.48
ARHGEF28-212ENST00000513042 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
ARHGEF28-212ENST00000513042 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
ARHGEF28-212ENST00000513042 SPACA4Q8TDM5 124 aa12.07□□□□□ -0.48
ARHGEF28-212ENST00000513042 KIF25-AS1Q9Y6Z4 181 aa12.07□□□□□ -0.48
ARHGEF28-212ENST00000513042 CXCL6P80162 114 aa12.06□□□□□ -0.48
ARHGEF28-212ENST00000513042 ANKHD1Q8IWZ3 2542 aaKnown RBP12.06□□□□□ -0.48
ARHGEF28-212ENST00000513042 hDV103S1A0JD37 113 aa12.06□□□□□ -0.48
ARHGEF28-212ENST00000513042 MOBPQ13875 183 aa12.05□□□□□ -0.48
ARHGEF28-212ENST00000513042 Q8N2B8 174 aa12.05□□□□□ -0.48
ARHGEF28-212ENST00000513042 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
ARHGEF28-212ENST00000513042 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
ARHGEF28-212ENST00000513042 AGRNO00468 2067 aa12.05□□□□□ -0.48
ARHGEF28-212ENST00000513042 MDFIQ99750 246 aa12.04□□□□□ -0.48
ARHGEF28-212ENST00000513042 LINC00167Q96N53 147 aa12.03□□□□□ -0.48
ARHGEF28-212ENST00000513042 C6orf48Q9UBA6 75 aa12.02□□□□□ -0.48
ARHGEF28-212ENST00000513042 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
ARHGEF28-212ENST00000513042 FAM218AQ96MZ4 157 aa12.01□□□□□ -0.49
ARHGEF28-212ENST00000513042 CSPG4Q6UVK1 2322 aa12□□□□□ -0.49
ARHGEF28-212ENST00000513042 LINC01546A6NGU7 62 aa12□□□□□ -0.49
ARHGEF28-212ENST00000513042 A0A1B0GU69 56 aa11.99□□□□□ -0.49
ARHGEF28-212ENST00000513042 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
ARHGEF28-212ENST00000513042 PHF5AQ7RTV0 110 aaKnown RBP11.98□□□□□ -0.49
ARHGEF28-212ENST00000513042 SPG11Q96JI7 2443 aa11.98□□□□□ -0.49
ARHGEF28-212ENST00000513042 IGHV3OR16-9A0A0B4J2B5 98 aa11.96□□□□□ -0.49
ARHGEF28-212ENST00000513042 SMCPP49901 116 aaPredicted RBP11.96□□□□□ -0.5
ARHGEF28-212ENST00000513042 SPAG11AQ6PDA7 123 aa11.95□□□□□ -0.5
ARHGEF28-212ENST00000513042 LINC00315P59091 139 aa11.95□□□□□ -0.5
ARHGEF28-212ENST00000513042 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
ARHGEF28-212ENST00000513042 FAM19A4Q96LR4 140 aa11.95□□□□□ -0.5
ARHGEF28-212ENST00000513042 RPL37AP61513 92 aaKnown RBP11.94□□□□□ -0.5
ARHGEF28-212ENST00000513042 TET2Q6N021 2002 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF28-212ENST00000513042 C4orf26Q17RF5 130 aa11.93□□□□□ -0.5
ARHGEF28-212ENST00000513042 PTPN13Q12923 2485 aa11.92□□□□□ -0.5
ARHGEF28-212ENST00000513042 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
ARHGEF28-212ENST00000513042 ST20-AS1Q8NBB2 130 aa11.92□□□□□ -0.5
ARHGEF28-212ENST00000513042 NHLRC4P0CG21 123 aaPredicted RBP11.92□□□□□ -0.5
ARHGEF28-212ENST00000513042 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
ARHGEF28-212ENST00000513042 IGLV8-61A0A075B6I0 122 aa11.91□□□□□ -0.5
ARHGEF28-212ENST00000513042 ACYP2P14621 99 aa11.91□□□□□ -0.5
ARHGEF28-212ENST00000513042 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
ARHGEF28-212ENST00000513042 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
ARHGEF28-212ENST00000513042 CUL9Q8IWT3 2517 aa11.89□□□□□ -0.51
ARHGEF28-212ENST00000513042 Q6ZQT0 140 aa11.88□□□□□ -0.51
ARHGEF28-212ENST00000513042 EPM2AB3EWF7 344 aa11.86□□□□□ -0.51
ARHGEF28-212ENST00000513042 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
ARHGEF28-212ENST00000513042 RTL8CO15255 209 aa11.86□□□□□ -0.51
ARHGEF28-212ENST00000513042 TP53AIP1Q9HCN2 124 aa11.86□□□□□ -0.51
ARHGEF28-212ENST00000513042 LINC00313P59037 77 aa11.84□□□□□ -0.51
ARHGEF28-212ENST00000513042 Q6ZRX8 168 aa11.84□□□□□ -0.51
ARHGEF28-212ENST00000513042 IGLV5-45A0A087WSX0 123 aa11.83□□□□□ -0.52
ARHGEF28-212ENST00000513042 TM2D3Q9BRN9 247 aa11.82□□□□□ -0.52
ARHGEF28-212ENST00000513042 SRCAPQ6ZRS2 3230 aa11.82□□□□□ -0.52
ARHGEF28-212ENST00000513042 PRO0628Q9UI54 55 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms