RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 ENHOQ6UWT2 76 aa2.98□□□□□ -1.93
VCAN-209ENST00000513016 NTM-AS1Q6ZSK4 140 aa2.98□□□□□ -1.93
VCAN-209ENST00000513016 TYMSOSQ8TAI1 123 aa2.98□□□□□ -1.93
VCAN-209ENST00000513016 CACNA1AO00555 2505 aa2.98□□□□□ -1.93
VCAN-209ENST00000513016 IGHV6-1A0A0B4J1U7 121 aa2.98□□□□□ -1.93
VCAN-209ENST00000513016 A8MZ25 164 aa2.98□□□□□ -1.93
VCAN-209ENST00000513016 AMELXQ99217 191 aa2.98□□□□□ -1.93
VCAN-209ENST00000513016 SONP18583 2426 aaKnown RBP2.97□□□□□ -1.93
VCAN-209ENST00000513016 C1orf195Q5TG92 126 aa2.97□□□□□ -1.93
VCAN-209ENST00000513016 HIVEP3Q5T1R4 2406 aa2.97□□□□□ -1.93
VCAN-209ENST00000513016 MAPKAPK5-AS1Q8N8E1 139 aa2.97□□□□□ -1.93
VCAN-209ENST00000513016 LINC00694P0DN24 101 aa2.97□□□□□ -1.93
VCAN-209ENST00000513016 X6R8D5 127 aa2.97□□□□□ -1.93
VCAN-209ENST00000513016 Q8N814 137 aa2.96□□□□□ -1.93
VCAN-209ENST00000513016 NCOR2Q9Y618 2525 aa2.96□□□□□ -1.94
VCAN-209ENST00000513016 VPREB1P12018 145 aa2.96□□□□□ -1.94
VCAN-209ENST00000513016 C11orf72Q8NBR9 251 aa2.96□□□□□ -1.94
VCAN-209ENST00000513016 C20orf197Q8N268 126 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 PTPRSQ13332 1948 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 ATRXP46100 2492 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 SPAG11AQ6PDA7 123 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 Q8NAQ8 132 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 SPACA4Q8TDM5 124 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 IMUPQ9GZP8 106 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 K7EIL1 84 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 SDIM1Q6ZPB5 146 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 Q8NBF4 154 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 LINC00588Q9Y4M8 146 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 A0A087WSZ3 146 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 Q6ZSN1 163 aa2.95□□□□□ -1.94
VCAN-209ENST00000513016 Q6Q795 121 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 UQCRQO14949 82 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 DNAH10OSP0CZ25 163 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 PRLHP81277 87 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 C19orf73Q9NVV2 129 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 COL4A2P08572 1712 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 A6NED7 52 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 PRR4Q16378 134 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 LINC00167Q96N53 147 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 SORL1Q92673 2214 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 A0A1B0GW54 56 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 ATP11AUNQ6ZP68 121 aa2.94□□□□□ -1.94
VCAN-209ENST00000513016 TET2Q6N021 2002 aaPredicted RBP2.93□□□□□ -1.94
VCAN-209ENST00000513016 TRBV7-6A0A0J9YX20 115 aa2.93□□□□□ -1.94
VCAN-209ENST00000513016 BCE1O60756 84 aa2.93□□□□□ -1.94
VCAN-209ENST00000513016 MOBPQ13875 183 aa2.93□□□□□ -1.94
VCAN-209ENST00000513016 LINC00575Q6W349 94 aa2.93□□□□□ -1.94
VCAN-209ENST00000513016 RAI1Q7Z5J4 1906 aaPredicted RBP2.93□□□□□ -1.94
VCAN-209ENST00000513016 PRR14LQ5THK1 2151 aa2.93□□□□□ -1.94
VCAN-209ENST00000513016 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 FAM30AQ9NZY2 134 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 FAM19A4Q96LR4 140 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 hDV103S1A0JD37 113 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 COX6B2Q6YFQ2 88 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 GVQW2A0A096LPI5 108 aaPredicted RBP2.92□□□□□ -1.94
VCAN-209ENST00000513016 KLK9Q2XQG4 91 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 LINC01547P58512 204 aaPredicted RBP2.92□□□□□ -1.94
VCAN-209ENST00000513016 GAS8-AS1O95177 125 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 TP53AIP1Q9HCN2 124 aa2.92□□□□□ -1.94
VCAN-209ENST00000513016 PHF5AQ7RTV0 110 aaKnown RBP2.92□□□□□ -1.94
VCAN-209ENST00000513016 IGHV3OR16-9A0A0B4J2B5 98 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 HCG22E2RYF7 251 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 C8orf87E5RJ46 101 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 TM2D3Q9BRN9 247 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
VCAN-209ENST00000513016 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 CCDC168Q8NDH2 2452 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 C6orf48Q9UBA6 75 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 WNK1Q9H4A3 2382 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 TRAV7A0A075B6U4 112 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 KIAA1549Q9HCM3 1950 aa2.91□□□□□ -1.94
VCAN-209ENST00000513016 H0Y9P7 68 aa2.9□□□□□ -1.94
VCAN-209ENST00000513016 LINC00313P59037 77 aa2.9□□□□□ -1.94
VCAN-209ENST00000513016 PMAIP1Q13794 54 aa2.9□□□□□ -1.94
VCAN-209ENST00000513016 IGLV5-39A0A0G2JS06 123 aa2.9□□□□□ -1.95
VCAN-209ENST00000513016 CDIP1Q9H305 208 aa2.9□□□□□ -1.95
VCAN-209ENST00000513016 IGKV2D-30A0A075B6S6 120 aa2.9□□□□□ -1.95
VCAN-209ENST00000513016 IGKV2-30P06310 120 aa2.9□□□□□ -1.95
VCAN-209ENST00000513016 SSBP3-AS1Q7Z2R9 100 aa2.9□□□□□ -1.95
VCAN-209ENST00000513016 KIAA0087Q14695 138 aa2.9□□□□□ -1.95
VCAN-209ENST00000513016 KRTAP10-11P60412 298 aa2.9□□□□□ -1.95
VCAN-209ENST00000513016 A0A087WTM6 91 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 A0A087WYN8 130 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 A0A096LNT2 108 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 EPM2AB3EWF7 344 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 SERTAD4-AS1Q5TG53 156 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 IGF2RP11717 2491 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 SPINK1P00995 79 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 C7orf65Q6ZTY9 151 aa2.89□□□□□ -1.95
VCAN-209ENST00000513016 LINC00304Q8N9R0 145 aa2.88□□□□□ -1.95
VCAN-209ENST00000513016 YPEL4Q96NS1 127 aa2.88□□□□□ -1.95
VCAN-209ENST00000513016 SRCAPQ6ZRS2 3230 aa2.88□□□□□ -1.95
VCAN-209ENST00000513016 PCOTHQ58A44 107 aa2.88□□□□□ -1.95
VCAN-209ENST00000513016 C2orf91Q6ZV80 131 aa2.88□□□□□ -1.95
VCAN-209ENST00000513016 ABCA2Q9BZC7 2435 aa2.88□□□□□ -1.95
VCAN-209ENST00000513016 TSPEAR-AS2P59090 65 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 ADAMTSL4-AS1Q5T5F5 129 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 Q6ZRX8 168 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 IGLV5-45A0A087WSX0 123 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms