RNA–Protein interactions for RNA: ENST00000512966.1

SH3TC1-222, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-222	ENST00000512966	USP17L23	D6RBM5	183 aa		11.28	□□□□□ -0.6
SH3TC1-222	ENST00000512966	TIMM17B	O60830	172 aa		11.28	□□□□□ -0.6
SH3TC1-222	ENST00000512966	C6orf223	Q8N319	242 aa		11.28	□□□□□ -0.6
SH3TC1-222	ENST00000512966	CIRBP	Q14011	172 aa	Known RBP	11.26	□□□□□ -0.61
SH3TC1-222	ENST00000512966	HIGD2B	Q4VC39	106 aa		11.26	□□□□□ -0.61
SH3TC1-222	ENST00000512966	C2orf82	Q6UX34	121 aa		11.26	□□□□□ -0.61
SH3TC1-222	ENST00000512966	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.26	□□□□□ -0.61
SH3TC1-222	ENST00000512966	TMEM238	C9JI98	176 aa		11.25	□□□□□ -0.61
SH3TC1-222	ENST00000512966	CTAG1A	P78358	180 aa		11.25	□□□□□ -0.61
SH3TC1-222	ENST00000512966	TAL2	Q16559	108 aa		11.25	□□□□□ -0.61
SH3TC1-222	ENST00000512966	DNAH1	Q9P2D7	4330 aa		11.24	□□□□□ -0.61
SH3TC1-222	ENST00000512966	TENM2	Q9NT68	2774 aa		11.24	□□□□□ -0.61
SH3TC1-222	ENST00000512966	C14orf177	Q52M58	125 aa		11.24	□□□□□ -0.61
SH3TC1-222	ENST00000512966	C1orf134	Q5TEV5	83 aa		11.24	□□□□□ -0.61
SH3TC1-222	ENST00000512966	LINC00526	Q96FQ7	95 aa		11.24	□□□□□ -0.61
SH3TC1-222	ENST00000512966	CAMK2N2	Q96S95	79 aa		11.24	□□□□□ -0.61
SH3TC1-222	ENST00000512966	LITAF	Q99732	161 aa		11.24	□□□□□ -0.61
SH3TC1-222	ENST00000512966	MEIG1	Q5JSS6	88 aa		11.23	□□□□□ -0.61
SH3TC1-222	ENST00000512966	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.23	□□□□□ -0.61
SH3TC1-222	ENST00000512966		Q6ZVH6	145 aa		11.23	□□□□□ -0.61
SH3TC1-222	ENST00000512966	TRBV30	A0A0K0K1B3	111 aa		11.22	□□□□□ -0.61
SH3TC1-222	ENST00000512966	HSD52	Q0P140	79 aa		11.22	□□□□□ -0.61
SH3TC1-222	ENST00000512966	COX17	Q14061	63 aa		11.22	□□□□□ -0.61
SH3TC1-222	ENST00000512966	SPANXD	Q9BXN6	97 aa		11.22	□□□□□ -0.61
SH3TC1-222	ENST00000512966	SPANXC	Q9NY87	97 aa		11.22	□□□□□ -0.61
SH3TC1-222	ENST00000512966	ERG28	Q9UKR5	140 aa		11.22	□□□□□ -0.61
SH3TC1-222	ENST00000512966	LRCOL1	A6NCL2	159 aa		11.21	□□□□□ -0.61
SH3TC1-222	ENST00000512966	SYCN	Q0VAF6	134 aa		11.21	□□□□□ -0.61
SH3TC1-222	ENST00000512966	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
SH3TC1-222	ENST00000512966	C10orf25	Q5T742	122 aa		11.21	□□□□□ -0.61
SH3TC1-222	ENST00000512966	HIST1H4G	Q99525	98 aa		11.21	□□□□□ -0.61
SH3TC1-222	ENST00000512966	ALMS1	Q8TCU4	4167 aa		11.2	□□□□□ -0.62
SH3TC1-222	ENST00000512966	LCE6A	A0A183	80 aa		11.2	□□□□□ -0.62
SH3TC1-222	ENST00000512966	SMIM13	P0DJ93	91 aa		11.2	□□□□□ -0.62
SH3TC1-222	ENST00000512966	RNF151	Q2KHN1	245 aa		11.2	□□□□□ -0.62
SH3TC1-222	ENST00000512966	LECT2	O14960	151 aa		11.19	□□□□□ -0.62
SH3TC1-222	ENST00000512966	WFDC2	Q14508	124 aa		11.19	□□□□□ -0.62
SH3TC1-222	ENST00000512966	ADAMTSL4-AS1	Q5T5F5	129 aa		11.19	□□□□□ -0.62
SH3TC1-222	ENST00000512966		Q6ZRU5	148 aa		11.19	□□□□□ -0.62
SH3TC1-222	ENST00000512966	C6orf48	Q9UBA6	75 aa		11.19	□□□□□ -0.62
SH3TC1-222	ENST00000512966	LYST	Q99698	3801 aa		11.19	□□□□□ -0.62
SH3TC1-222	ENST00000512966	IFITM1	P13164	125 aa		11.18	□□□□□ -0.62
SH3TC1-222	ENST00000512966	PTTG1IP	P53801	180 aa		11.18	□□□□□ -0.62
SH3TC1-222	ENST00000512966	LINC00158	P58513	81 aa		11.18	□□□□□ -0.62
SH3TC1-222	ENST00000512966		M0R143	59 aa		11.17	□□□□□ -0.62
SH3TC1-222	ENST00000512966	SLPI	P03973	132 aa		11.17	□□□□□ -0.62
SH3TC1-222	ENST00000512966	CEND1	Q8N111	149 aa		11.17	□□□□□ -0.62
SH3TC1-222	ENST00000512966	CARD19	Q96LW7	228 aa		11.17	□□□□□ -0.62
SH3TC1-222	ENST00000512966	PPDPF	Q9H3Y8	114 aa		11.17	□□□□□ -0.62
SH3TC1-222	ENST00000512966	GCSH	P23434	173 aa		11.16	□□□□□ -0.62
SH3TC1-222	ENST00000512966	PFN2	P35080	140 aa		11.16	□□□□□ -0.62
SH3TC1-222	ENST00000512966	CNBP	P62633	177 aa	Known RBP	11.16	□□□□□ -0.62
SH3TC1-222	ENST00000512966	COPS9	Q8WXC6	57 aa		11.16	□□□□□ -0.62
SH3TC1-222	ENST00000512966		A0A087WTM6	91 aa		11.15	□□□□□ -0.62
SH3TC1-222	ENST00000512966		A0A0U1RRA0	63 aa		11.15	□□□□□ -0.62
SH3TC1-222	ENST00000512966	C9orf116	Q5BN46	136 aa	Predicted RBP	11.15	□□□□□ -0.62
SH3TC1-222	ENST00000512966	BVES-AS1	Q5T3Y7	98 aa		11.15	□□□□□ -0.62
SH3TC1-222	ENST00000512966	MIR7-3HG	Q8N6C7	128 aa		11.15	□□□□□ -0.62
SH3TC1-222	ENST00000512966	HINT1	P49773	126 aa	Predicted RBP	11.14	□□□□□ -0.63
SH3TC1-222	ENST00000512966	MUSTN1	Q8IVN3	82 aa		11.14	□□□□□ -0.63
SH3TC1-222	ENST00000512966	DNAH6	Q9C0G6	4158 aa		11.13	□□□□□ -0.63
SH3TC1-222	ENST00000512966	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.13	□□□□□ -0.63
SH3TC1-222	ENST00000512966	TLX1NB	P0CAT3	122 aa		11.13	□□□□□ -0.63
SH3TC1-222	ENST00000512966		Q8N814	137 aa		11.13	□□□□□ -0.63
SH3TC1-222	ENST00000512966	DAND5	Q8N907	189 aa		11.13	□□□□□ -0.63
SH3TC1-222	ENST00000512966	LINC00308	Q8TCZ7	52 aa		11.13	□□□□□ -0.63
SH3TC1-222	ENST00000512966	LOC107984156	A0A0G2JMH3	177 aa		11.12	□□□□□ -0.63
SH3TC1-222	ENST00000512966	RPL24	P83731	157 aa	Known RBP	11.12	□□□□□ -0.63
SH3TC1-222	ENST00000512966	ARL17A	Q8IVW1	177 aa		11.12	□□□□□ -0.63
SH3TC1-222	ENST00000512966	NDUFC2-KCTD14	E9PQ53	114 aa		11.11	□□□□□ -0.63
SH3TC1-222	ENST00000512966	TMEM238L	A0A1B0GVL6	79 aa		11.1	□□□□□ -0.63
SH3TC1-222	ENST00000512966		A6NJY4	79 aa		11.1	□□□□□ -0.63
SH3TC1-222	ENST00000512966	RTL8C	O15255	209 aa		11.1	□□□□□ -0.63
SH3TC1-222	ENST00000512966	FXYD2	P54710	66 aa		11.1	□□□□□ -0.63
SH3TC1-222	ENST00000512966	SNHG12	Q9BXW3	62 aa		11.1	□□□□□ -0.63
SH3TC1-222	ENST00000512966	SOSTDC1	Q6X4U4	206 aa		11.09	□□□□□ -0.63
SH3TC1-222	ENST00000512966	SND1-IT1	Q9HBX3	110 aa		11.09	□□□□□ -0.63
SH3TC1-222	ENST00000512966	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.08	□□□□□ -0.64
SH3TC1-222	ENST00000512966	EREG	O14944	169 aa		11.08	□□□□□ -0.64
SH3TC1-222	ENST00000512966	NPC2	P61916	151 aa		11.08	□□□□□ -0.64
SH3TC1-222	ENST00000512966		A4D1N5	150 aa		11.07	□□□□□ -0.64
SH3TC1-222	ENST00000512966	EIF4EBP3	O60516	100 aa	Predicted RBP	11.07	□□□□□ -0.64
SH3TC1-222	ENST00000512966	BATF	Q16520	125 aa		11.07	□□□□□ -0.64
SH3TC1-222	ENST00000512966	LOC107984640	A0A0U1RRK4	108 aa		11.06	□□□□□ -0.64
SH3TC1-222	ENST00000512966		A6NDN8	102 aa		11.06	□□□□□ -0.64
SH3TC1-222	ENST00000512966	TNP2	Q05952	138 aa		11.06	□□□□□ -0.64
SH3TC1-222	ENST00000512966	C9orf163	Q8N9P6	203 aa		11.06	□□□□□ -0.64
SH3TC1-222	ENST00000512966	PKIG	Q9Y2B9	76 aa		11.06	□□□□□ -0.64
SH3TC1-222	ENST00000512966	KMT2A	Q03164	3969 aa		11.06	□□□□□ -0.64
SH3TC1-222	ENST00000512966		A0A1B0GWB2	263 aa		11.05	□□□□□ -0.64
SH3TC1-222	ENST00000512966		Q6ZRP5	223 aa		11.05	□□□□□ -0.64
SH3TC1-222	ENST00000512966	NDUFC2	O95298	119 aa		11.03	□□□□□ -0.64
SH3TC1-222	ENST00000512966	NHP2	Q9NX24	153 aa	Known RBP	11.03	□□□□□ -0.64
SH3TC1-222	ENST00000512966		A0A0B4J2C4	111 aa		11.02	□□□□□ -0.65
SH3TC1-222	ENST00000512966	RPL18A	Q02543	176 aa	Known RBP	11.02	□□□□□ -0.65
SH3TC1-222	ENST00000512966	GAGE2E	Q4V326	116 aa		11.02	□□□□□ -0.65
SH3TC1-222	ENST00000512966	GAGE2D	Q9UEU5	116 aa		11.02	□□□□□ -0.65
SH3TC1-222	ENST00000512966	CFC1B	P0CG36	223 aa		11.01	□□□□□ -0.65
SH3TC1-222	ENST00000512966	CFC1	P0CG37	223 aa		11.01	□□□□□ -0.65
SH3TC1-222	ENST00000512966	LBH	Q53QV2	105 aa	Predicted RBP	11.01	□□□□□ -0.65

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