RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
LINC01550-203ENST00000512901 PCP2Q8IVA1 136 aa6.93□□□□□ -1.3
LINC01550-203ENST00000512901 Q8IZM0 81 aa6.93□□□□□ -1.3
LINC01550-203ENST00000512901 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
LINC01550-203ENST00000512901 C15orf56Q8N910 161 aa6.92□□□□□ -1.3
LINC01550-203ENST00000512901 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
LINC01550-203ENST00000512901 ZNF815PA8K554 130 aa6.92□□□□□ -1.3
LINC01550-203ENST00000512901 CKS1BP61024 79 aa6.92□□□□□ -1.3
LINC01550-203ENST00000512901 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
LINC01550-203ENST00000512901 Q6ZRN7 208 aaPredicted RBP6.91□□□□□ -1.3
LINC01550-203ENST00000512901 LINC00526Q96FQ7 95 aa6.91□□□□□ -1.3
LINC01550-203ENST00000512901 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
LINC01550-203ENST00000512901 BVES-AS1Q5T3Y7 98 aa6.91□□□□□ -1.3
LINC01550-203ENST00000512901 GVQW2A0A096LPI5 108 aaPredicted RBP6.9□□□□□ -1.3
LINC01550-203ENST00000512901 CXCL5P42830 114 aa6.9□□□□□ -1.3
LINC01550-203ENST00000512901 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
LINC01550-203ENST00000512901 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
LINC01550-203ENST00000512901 NDUFA1O15239 70 aa6.89□□□□□ -1.31
LINC01550-203ENST00000512901 SFTA2Q6UW10 78 aa6.89□□□□□ -1.31
LINC01550-203ENST00000512901 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
LINC01550-203ENST00000512901 WFDC2Q14508 124 aa6.89□□□□□ -1.31
LINC01550-203ENST00000512901 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
LINC01550-203ENST00000512901 SCGB1D4Q6XE38 83 aa6.89□□□□□ -1.31
LINC01550-203ENST00000512901 ZNF625Q96I27 306 aaPredicted RBP6.89□□□□□ -1.31
LINC01550-203ENST00000512901 CAMK2N2Q96S95 79 aa6.89□□□□□ -1.31
LINC01550-203ENST00000512901 NTN5Q8WTR8 489 aaPredicted RBP6.88□□□□□ -1.31
LINC01550-203ENST00000512901 DLEU1O43261 78 aa6.88□□□□□ -1.31
LINC01550-203ENST00000512901 HERV-K104P63124 156 aa6.88□□□□□ -1.31
LINC01550-203ENST00000512901 C2orf48Q96LS8 159 aa6.88□□□□□ -1.31
LINC01550-203ENST00000512901 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
LINC01550-203ENST00000512901 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
LINC01550-203ENST00000512901 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
LINC01550-203ENST00000512901 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
LINC01550-203ENST00000512901 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
LINC01550-203ENST00000512901 F8WDY8 70 aa6.86□□□□□ -1.31
LINC01550-203ENST00000512901 TAX1BP3O14907 124 aa6.86□□□□□ -1.31
LINC01550-203ENST00000512901 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
LINC01550-203ENST00000512901 RYR2Q92736 4967 aa6.86□□□□□ -1.31
LINC01550-203ENST00000512901 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
LINC01550-203ENST00000512901 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
LINC01550-203ENST00000512901 A0A087WTM6 91 aa6.85□□□□□ -1.31
LINC01550-203ENST00000512901 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
LINC01550-203ENST00000512901 Q6ZRU5 148 aa6.85□□□□□ -1.31
LINC01550-203ENST00000512901 FRAS1Q86XX4 4008 aa6.85□□□□□ -1.31
LINC01550-203ENST00000512901 RTL8CO15255 209 aa6.85□□□□□ -1.31
LINC01550-203ENST00000512901 CIRBPQ14011 172 aaKnown RBP6.85□□□□□ -1.31
LINC01550-203ENST00000512901 CARD19Q96LW7 228 aa6.85□□□□□ -1.31
LINC01550-203ENST00000512901 TRBV30A0A0K0K1B3 111 aa6.84□□□□□ -1.31
LINC01550-203ENST00000512901 A0A0U1RRA0 63 aa6.84□□□□□ -1.31
LINC01550-203ENST00000512901 PFN2P35080 140 aa6.84□□□□□ -1.31
LINC01550-203ENST00000512901 Q8N814 137 aa6.84□□□□□ -1.31
LINC01550-203ENST00000512901 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.32
LINC01550-203ENST00000512901 TMEM238C9JI98 176 aa6.84□□□□□ -1.32
LINC01550-203ENST00000512901 LINC00158P58513 81 aa6.84□□□□□ -1.32
LINC01550-203ENST00000512901 TNP2Q05952 138 aa6.84□□□□□ -1.32
LINC01550-203ENST00000512901 C6orf48Q9UBA6 75 aa6.84□□□□□ -1.32
LINC01550-203ENST00000512901 ERG28Q9UKR5 140 aa6.84□□□□□ -1.32
LINC01550-203ENST00000512901 SMIM13P0DJ93 91 aa6.83□□□□□ -1.32
LINC01550-203ENST00000512901 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
LINC01550-203ENST00000512901 SLPIP03973 132 aa6.82□□□□□ -1.32
LINC01550-203ENST00000512901 HIGD1BQ9P298 99 aa6.82□□□□□ -1.32
LINC01550-203ENST00000512901 CNBPP62633 177 aaKnown RBP6.82□□□□□ -1.32
LINC01550-203ENST00000512901 HSD52Q0P140 79 aa6.82□□□□□ -1.32
LINC01550-203ENST00000512901 TIMM17BO60830 172 aa6.81□□□□□ -1.32
LINC01550-203ENST00000512901 SRSF9Q13242 221 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC01550-203ENST00000512901 COX17Q14061 63 aa6.81□□□□□ -1.32
LINC01550-203ENST00000512901 NAA38Q9BRA0 125 aaKnown RBP6.81□□□□□ -1.32
LINC01550-203ENST00000512901 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
LINC01550-203ENST00000512901 DAND5Q8N907 189 aa6.81□□□□□ -1.32
LINC01550-203ENST00000512901 HIST1H4GQ99525 98 aa6.81□□□□□ -1.32
LINC01550-203ENST00000512901 GCSHP23434 173 aa6.8□□□□□ -1.32
LINC01550-203ENST00000512901 FXYD2P54710 66 aa6.8□□□□□ -1.32
LINC01550-203ENST00000512901 VAMP3Q15836 100 aa6.8□□□□□ -1.32
LINC01550-203ENST00000512901 ADAMTSL4-AS1Q5T5F5 129 aa6.8□□□□□ -1.32
LINC01550-203ENST00000512901 MIR7-3HGQ8N6C7 128 aa6.8□□□□□ -1.32
LINC01550-203ENST00000512901 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
LINC01550-203ENST00000512901 LITAFQ99732 161 aa6.8□□□□□ -1.32
LINC01550-203ENST00000512901 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
LINC01550-203ENST00000512901 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
LINC01550-203ENST00000512901 K7ERJ3 54 aa6.79□□□□□ -1.32
LINC01550-203ENST00000512901 PTTG1IPP53801 180 aa6.79□□□□□ -1.32
LINC01550-203ENST00000512901 NPC2P61916 151 aa6.79□□□□□ -1.32
LINC01550-203ENST00000512901 RPL18AQ02543 176 aaKnown RBP6.79□□□□□ -1.32
LINC01550-203ENST00000512901 LINC00336Q6ZUF6 198 aa6.79□□□□□ -1.32
LINC01550-203ENST00000512901 SPANXDQ9BXN6 97 aa6.79□□□□□ -1.32
LINC01550-203ENST00000512901 SPANXCQ9NY87 97 aa6.79□□□□□ -1.32
LINC01550-203ENST00000512901 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
LINC01550-203ENST00000512901 UBE2V1Q13404 147 aa6.78□□□□□ -1.32
LINC01550-203ENST00000512901 HECTD4Q9Y4D8 3996 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 TAL2Q16559 108 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 GAGE2EQ4V326 116 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 GAGE2DQ9UEU5 116 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
LINC01550-203ENST00000512901 A6NDN8 102 aa6.76□□□□□ -1.33
LINC01550-203ENST00000512901 FUSP35637 526 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC01550-203ENST00000512901 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
LINC01550-203ENST00000512901 PKIGQ9Y2B9 76 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms