RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 BANF2Q9H503 90 aa-0.6□□□□□ -2.51
PDGFC-208ENST00000512711 DNAJC15Q9Y5T4 150 aa-0.6□□□□□ -2.51
PDGFC-208ENST00000512711 EIF3AQ14152 1382 aaKnown RBP-0.6□□□□□ -2.51
PDGFC-208ENST00000512711 IBTKQ9P2D0 1353 aaPredicted RBP-0.6□□□□□ -2.51
PDGFC-208ENST00000512711 MADDQ8WXG6 1647 aa-0.6□□□□□ -2.51
PDGFC-208ENST00000512711 MAGI1Q96QZ7 1491 aaPredicted RBP-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 NRXN1Q9ULB1 1477 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 SHANK2Q9UPX8 1470 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 RAPGEF2Q9Y4G8 1499 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 SPHKAPQ2M3C7 1700 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 NALCNQ8IZF0 1738 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 DOT1LQ8TEK3 1739 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 ARAP2Q8WZ64 1704 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 SYNMO15061 1565 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 GLI2P10070 1586 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 SETBP1Q9Y6X0 1596 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 SPEF2Q9C093 1822 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 MYOM1P52179 1685 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 A6NIN4 97 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 DPM2O94777 84 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 NCR2O95944 276 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 HLA-DRB4P13762 266 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 UBE2D3P61077 147 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 TMEM244Q5VVB8 128 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 WFDC13Q8IUB5 93 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 TMEM35BQ8NCS4 154 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 DEFB105AQ8NG35 78 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 OR9Q1Q8NGQ5 310 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 PP6455Q8WZ26 134 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 RPRMQ9NS64 109 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 NDUFA12Q9UI09 145 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 HLA-DRB4X5D2U9 266 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 RGPD2P0DJD1 1756 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 IFT172Q9UG01 1749 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 TOGARAM1Q9Y4F4 1720 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 ABCC10Q5T3U5 1492 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 MLH3Q9UHC1 1453 aa-0.61□□□□□ -2.51
PDGFC-208ENST00000512711 ANKRD36A6QL64 1941 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 PBRM1Q86U86 1689 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 VPS8Q8N3P4 1428 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 MAGI3Q5TCQ9 1506 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 LRRC7Q96NW7 1537 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 KIF21BO75037 1637 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 IGLV5-48A0A075B6I7 105 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 MMP24-AS1A0A0U1RRL7 71 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 FAM223BA6NKX1 122 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 PITX3O75364 302 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 HMGA1P17096 107 aaKnown RBP-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 FGF7P21781 194 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 G0S2P27469 103 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 PIGYQ3MUY2 71 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 LINC01545Q5VT33 79 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 SAMD13Q5VXD3 122 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 ZNF818PQ6ZRF7 136 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 C5orf38Q86SI9 138 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 OR8I2Q8N0Y5 310 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 C10orf82Q8WW14 230 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 PCBD2Q9H0N5 130 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 ATPIF1Q9UII2 106 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 CEP152O94986 1710 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 ITSN1Q15811 1721 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 UHRF1BP1LA0JNW5 1464 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 PXDNQ92626 1479 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 DNMBPQ6XZF7 1577 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 TOPAZ1Q8N9V7 1692 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 ROBO1Q9Y6N7 1651 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 RGPD4Q7Z3J3 1758 aa-0.62□□□□□ -2.51
PDGFC-208ENST00000512711 OVOS2A0A0G2JMS6 1433 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 DAPK1P53355 1430 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 CUX1P39880 1505 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 DOCK2Q92608 1830 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 CLPSL1A2RUU4 121 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 TMEM238C9JI98 176 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 H7BZZ5 65 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 I3L2K1 104 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 COX6B1P14854 86 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 CD52P31358 61 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 UBE2D2P62837 147 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 RPS27LQ71UM5 84 aaKnown RBP-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 FAM223AQ8IWN6 122 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 TTC9CQ8N5M4 171 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 MNS1Q8NEH6 495 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 SPTSSBQ8NFR3 76 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 MRPL34Q9BQ48 92 aaKnown RBP-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 LSM2Q9Y333 95 aaKnown RBP-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 ARHGEF10O15013 1369 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 EIF4G3O43432 1585 aaKnown RBP-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 PEG3Q9GZU2 1588 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 ANKRD36CQ5JPF3 1778 aa-0.63□□□□□ -2.51
PDGFC-208ENST00000512711 ZFYVE16Q7Z3T8 1539 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 LY75O60449 1722 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 RGPD1P0DJD0 1748 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 QSER1Q2KHR3 1735 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 NUP188Q5SRE5 1749 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 SUPT6HQ7KZ85 1726 aaKnown RBP-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 ABCA3Q99758 1704 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 TEX14Q8IWB6 1497 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 ROCK1Q13464 1354 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms