RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ROS1P08922 2347 aa6.27□□□□□ -1.41
VCAN-208ENST00000512590 TRAV22A0A0B4J277 110 aa6.27□□□□□ -1.41
VCAN-208ENST00000512590 ZNF295-AS1Q8N0V1 137 aa6.27□□□□□ -1.41
VCAN-208ENST00000512590 TM2D3Q9BRN9 247 aa6.27□□□□□ -1.41
VCAN-208ENST00000512590 RLFQ13129 1914 aa6.27□□□□□ -1.41
VCAN-208ENST00000512590 LINC00483Q53H64 154 aa6.27□□□□□ -1.41
VCAN-208ENST00000512590 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
VCAN-208ENST00000512590 NYNRINQ9P2P1 1898 aaKnown RBP6.26□□□□□ -1.41
VCAN-208ENST00000512590 ZSWIM8A7E2V4 1837 aa6.26□□□□□ -1.41
VCAN-208ENST00000512590 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
VCAN-208ENST00000512590 EP400Q96L91 3159 aa6.26□□□□□ -1.41
VCAN-208ENST00000512590 MAPKAPK5-AS1Q8N8E1 139 aa6.25□□□□□ -1.41
VCAN-208ENST00000512590 TRAV7A0A075B6U4 112 aa6.25□□□□□ -1.41
VCAN-208ENST00000512590 KLLNB2CW77 178 aa6.25□□□□□ -1.41
VCAN-208ENST00000512590 C8orf87E5RJ46 101 aa6.25□□□□□ -1.41
VCAN-208ENST00000512590 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
VCAN-208ENST00000512590 TNRC6AQ8NDV7 1962 aaKnown RBP6.25□□□□□ -1.41
VCAN-208ENST00000512590 IGHV3OR16-9A0A0B4J2B5 98 aa6.25□□□□□ -1.41
VCAN-208ENST00000512590 BCE1O60756 84 aa6.23□□□□□ -1.41
VCAN-208ENST00000512590 MRPS12O15235 138 aaKnown RBP6.23□□□□□ -1.41
VCAN-208ENST00000512590 LINC00528Q8N1L1 170 aa6.23□□□□□ -1.41
VCAN-208ENST00000512590 DSCAMO60469 2012 aa6.23□□□□□ -1.41
VCAN-208ENST00000512590 SORL1Q92673 2214 aa6.23□□□□□ -1.41
VCAN-208ENST00000512590 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
VCAN-208ENST00000512590 IGLV5-39A0A0G2JS06 123 aa6.23□□□□□ -1.41
VCAN-208ENST00000512590 MUC4Q99102 2169 aa6.22□□□□□ -1.41
VCAN-208ENST00000512590 A0A1B0GUV1 79 aa6.22□□□□□ -1.41
VCAN-208ENST00000512590 CDSNQ15517 529 aa6.21□□□□□ -1.41
VCAN-208ENST00000512590 OBSCN-AS1Q96MR7 158 aa6.21□□□□□ -1.42
VCAN-208ENST00000512590 NOTCH2Q04721 2471 aa6.21□□□□□ -1.42
VCAN-208ENST00000512590 CXCL6P80162 114 aa6.21□□□□□ -1.42
VCAN-208ENST00000512590 OBSL1O75147 1896 aa6.21□□□□□ -1.42
VCAN-208ENST00000512590 PRR9Q5T870 116 aa6.21□□□□□ -1.42
VCAN-208ENST00000512590 LINC00574Q9H8X3 128 aa6.21□□□□□ -1.42
VCAN-208ENST00000512590 LOC105371267A0A1B0GV96 52 aa6.2□□□□□ -1.42
VCAN-208ENST00000512590 Q8N3U1 123 aa6.2□□□□□ -1.42
VCAN-208ENST00000512590 C9orf163Q8N9P6 203 aa6.2□□□□□ -1.42
VCAN-208ENST00000512590 FREM1Q5H8C1 2179 aa6.19□□□□□ -1.42
VCAN-208ENST00000512590 ST20-AS1Q8NBB2 130 aa6.19□□□□□ -1.42
VCAN-208ENST00000512590 SONP18583 2426 aaKnown RBP6.19□□□□□ -1.42
VCAN-208ENST00000512590 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
VCAN-208ENST00000512590 A0A087WYN8 130 aa6.19□□□□□ -1.42
VCAN-208ENST00000512590 LINC01561Q8N1V8 128 aa6.19□□□□□ -1.42
VCAN-208ENST00000512590 LINC00588Q9Y4M8 146 aa6.19□□□□□ -1.42
VCAN-208ENST00000512590 SMIM1B2RUZ4 78 aa6.18□□□□□ -1.42
VCAN-208ENST00000512590 LINC00694P0DN24 101 aa6.18□□□□□ -1.42
VCAN-208ENST00000512590 IGLV5-48A0A075B6I7 105 aa6.18□□□□□ -1.42
VCAN-208ENST00000512590 Q5VSD8 79 aa6.18□□□□□ -1.42
VCAN-208ENST00000512590 MGAMO43451 1857 aa6.18□□□□□ -1.42
VCAN-208ENST00000512590 POLR2KP53803 58 aaKnown RBP6.17□□□□□ -1.42
VCAN-208ENST00000512590 CCDC168Q8NDH2 2452 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 WNK1Q9H4A3 2382 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 DOPEY1Q5JWR5 2465 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 A0A0D9SG42 100 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 DSCR10P59022 87 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 H3BNG1 76 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 LINC01600Q96MT4 127 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 C11orf1Q9H5F2 150 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 VWA8A3KMH1 1905 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 PTPN13Q12923 2485 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 A8MTW9 85 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
VCAN-208ENST00000512590 DSCAML1Q8TD84 2053 aa6.16□□□□□ -1.42
VCAN-208ENST00000512590 COX7CP15954 63 aa6.16□□□□□ -1.42
VCAN-208ENST00000512590 PTPRDP23468 1912 aa6.16□□□□□ -1.42
VCAN-208ENST00000512590 ZFHX2Q9C0A1 2572 aaPredicted RBP6.16□□□□□ -1.42
VCAN-208ENST00000512590 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
VCAN-208ENST00000512590 PRR14LQ5THK1 2151 aa6.15□□□□□ -1.42
VCAN-208ENST00000512590 HRES1P13985 223 aa6.15□□□□□ -1.42
VCAN-208ENST00000512590 GPR179Q6PRD1 2367 aa6.15□□□□□ -1.43
VCAN-208ENST00000512590 PSORS1C2Q9UIG4 136 aa6.15□□□□□ -1.43
VCAN-208ENST00000512590 IGLV1-50A0A075B6I6 118 aa6.14□□□□□ -1.43
VCAN-208ENST00000512590 CENPFP49454 3210 aa6.14□□□□□ -1.43
VCAN-208ENST00000512590 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
VCAN-208ENST00000512590 LINC00476Q8WZB0 136 aa6.13□□□□□ -1.43
VCAN-208ENST00000512590 DNAH10OSP0CZ25 163 aa6.13□□□□□ -1.43
VCAN-208ENST00000512590 Q6ZQT0 140 aa6.13□□□□□ -1.43
VCAN-208ENST00000512590 PRO3102Q9H379 93 aa6.13□□□□□ -1.43
VCAN-208ENST00000512590 TANC1Q9C0D5 1861 aa6.13□□□□□ -1.43
VCAN-208ENST00000512590 PLXNA4Q9HCM2 1894 aa6.13□□□□□ -1.43
VCAN-208ENST00000512590 CRIP1P50238 77 aa6.12□□□□□ -1.43
VCAN-208ENST00000512590 C10orf91Q5T1B1 145 aa6.12□□□□□ -1.43
VCAN-208ENST00000512590 NCOA6Q14686 2063 aaPredicted RBP6.12□□□□□ -1.43
VCAN-208ENST00000512590 TET2Q6N021 2002 aaPredicted RBP6.11□□□□□ -1.43
VCAN-208ENST00000512590 HIVEP3Q5T1R4 2406 aa6.11□□□□□ -1.43
VCAN-208ENST00000512590 C11orf21Q9P2W6 132 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 PLAC4Q8WY50 150 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 SHANK1Q9Y566 2161 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 MED13LQ71F56 2210 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 A0A087WVE0 104 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 K7EIL1 84 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 TLX1NBP0CAT3 122 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
VCAN-208ENST00000512590 TP73-AS1Q9UF72 201 aa6.1□□□□□ -1.43
VCAN-208ENST00000512590 NUP210Q8TEM1 1887 aaPredicted RBP6.09□□□□□ -1.43
VCAN-208ENST00000512590 NLRC5Q86WI3 1866 aa6.09□□□□□ -1.43
VCAN-208ENST00000512590 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
VCAN-208ENST00000512590 A0A087WTM6 91 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms