RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 TEX43Q6ZNM6 134 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 UBE2DNLQ8IWF7 75 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 ATOH7Q8N100 152 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 MTURNQ8N3F0 131 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 MUC7Q8TAX7 377 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 MRPS16Q9Y3D3 137 aaKnown RBP4.68□□□□□ -1.66
RFC1-213ENST00000512275 CHTOPQ9Y3Y2 248 aaKnown RBP4.68□□□□□ -1.66
RFC1-213ENST00000512275 TENM2Q9NT68 2774 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 IGLV8-61A0A075B6I0 122 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 C20orf202A1L168 122 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 ZNF25P17030 456 aaPredicted RBP4.67□□□□□ -1.66
RFC1-213ENST00000512275 MRPS36P82909 103 aaKnown RBP4.67□□□□□ -1.66
RFC1-213ENST00000512275 JOSD1Q15040 202 aaPredicted RBP4.67□□□□□ -1.66
RFC1-213ENST00000512275 PYY3Q5JQD4 70 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 LINC01545Q5VT33 79 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 ZNF664Q8N3J9 261 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 AMELXQ99217 191 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 C2orf88Q9BSF0 95 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 CST9LQ9H4G1 147 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 CDC42SE2Q9NRR3 84 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 MRPL35Q9NZE8 188 aaKnown RBP4.67□□□□□ -1.66
RFC1-213ENST00000512275 CSMD3Q7Z407 3707 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 STARD9Q9P2P6 4700 aa4.67□□□□□ -1.66
RFC1-213ENST00000512275 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
RFC1-213ENST00000512275 TRAV13-1A0A0B4J241 112 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 TRAV12-1A0A0B4J245 112 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 A0A0J9YXV3 536 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 F8VRH5 84 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 ANGP03950 147 aaKnown RBP4.66□□□□□ -1.66
RFC1-213ENST00000512275 PKIAP61925 76 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 LGALS9CQ6DKI2 356 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 LINC00269Q8N2A0 174 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 KLK12Q9UKR0 248 aa4.66□□□□□ -1.66
RFC1-213ENST00000512275 CSDC2Q9Y534 153 aaKnown RBP4.66□□□□□ -1.66
RFC1-213ENST00000512275 IGLV4-69A0A075B6H9 119 aa4.65□□□□□ -1.67
RFC1-213ENST00000512275 C11orf86A6NJI1 115 aa4.65□□□□□ -1.67
RFC1-213ENST00000512275 SIVA1O15304 175 aa4.65□□□□□ -1.67
RFC1-213ENST00000512275 DPM2O94777 84 aa4.65□□□□□ -1.67
RFC1-213ENST00000512275 SMIM6P0DI80 62 aa4.65□□□□□ -1.67
RFC1-213ENST00000512275 TCTAP57738 103 aa4.65□□□□□ -1.67
RFC1-213ENST00000512275 CHAC1Q9BUX1 264 aa4.65□□□□□ -1.67
RFC1-213ENST00000512275 IGLV10-54A0A075B6I4 117 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 IGKCP01834 107 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 CRPP02741 224 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 DNAH10OSP0CZ25 163 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 IGLC3P0DOY3 106 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 UBE2D1P51668 147 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 REG3AQ06141 175 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 LINC01556Q5JQF7 62 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 UPK3BQ9BT76 320 aa4.64□□□□□ -1.67
RFC1-213ENST00000512275 LINC00959A0A1B0GUT2 108 aa4.63□□□□□ -1.67
RFC1-213ENST00000512275 CCL25O15444 150 aa4.63□□□□□ -1.67
RFC1-213ENST00000512275 PLNP26678 52 aa4.63□□□□□ -1.67
RFC1-213ENST00000512275 XCL1P47992 114 aa4.63□□□□□ -1.67
RFC1-213ENST00000512275 CASC10Q5T4H9 136 aa4.63□□□□□ -1.67
RFC1-213ENST00000512275 TMEM170BQ5T4T1 132 aa4.63□□□□□ -1.67
RFC1-213ENST00000512275 UBE2WQ96B02 151 aa4.63□□□□□ -1.67
RFC1-213ENST00000512275 GEMIN7Q9H840 131 aaKnown RBP4.63□□□□□ -1.67
RFC1-213ENST00000512275 IGHV3-64A0A075B6Q5 118 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 ZNF22P17026 224 aaPredicted RBP4.62□□□□□ -1.67
RFC1-213ENST00000512275 COX6A2Q02221 97 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 SS18Q15532 418 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 LINC00469Q8N7U9 141 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 C12orf57Q99622 126 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 VAMP8Q9BV40 100 aa4.62□□□□□ -1.67
RFC1-213ENST00000512275 VPS13DQ5THJ4 4388 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 ALMS1Q8TCU4 4167 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 TINCRA0A1B0GVN0 87 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 HSBP1L1C9JCN9 74 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 C3orf84H3BNL1 204 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 SPINK8P0C7L1 97 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 HERVK_113P63121 156 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
RFC1-213ENST00000512275 PRR34Q9NV39 138 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 CDKN2A-AS1Q9UH64 79 aa4.61□□□□□ -1.67
RFC1-213ENST00000512275 IGKV2D-24A0A075B6R9 120 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 TRAV8-3A0A0A6YYJ7 113 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 LY6G6CO95867 125 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 SEC11AP67812 179 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 S100A12P80511 92 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 MIAQ16674 131 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 SPATA45Q537H7 98 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 FAM19A3Q7Z5A8 133 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 C5orf38Q86SI9 138 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 PRO1933Q9H354 126 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 TP73-AS1Q9UF72 201 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
RFC1-213ENST00000512275 IGKV2D-26A0A0A0MRZ7 120 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 NBDYA0A0U1RRE5 68 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 TMEM223A0PJW6 202 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 FAM168BA1KXE4 195 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 IBA57-AS1B1ANH7 110 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 H3BRM9 83 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 M0R2N4 97 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 NMUP48645 174 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 DSCR10P59022 87 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 HERVK_113P61574 105 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms