RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 C20orf197Q8N268 126 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 DMBT1Q9UGM3 2413 aaPredicted RBP3.54□□□□□ -1.84
PTPN13-209ENST00000511467 PRAC2D3DTV9 90 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 IGHV4-30-4P0DP06 118 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 CRIP1P50238 77 aa3.54□□□□□ -1.84
PTPN13-209ENST00000511467 STAB2Q8WWQ8 2551 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 WIPF1O43516 503 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 MOBPQ13875 183 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 BAHCC1Q9P281 2608 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 A0A0J9YWU9 116 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 CLEC2BQ92478 149 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 LINC00526Q96FQ7 95 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 IGKV4-1P06312 121 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 NTM-AS1Q6ZSK4 140 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 ZNF625Q96I27 306 aaPredicted RBP3.53□□□□□ -1.84
PTPN13-209ENST00000511467 MDFIQ99750 246 aa3.53□□□□□ -1.84
PTPN13-209ENST00000511467 C1orf195Q5TG92 126 aa3.53□□□□□ -1.85
PTPN13-209ENST00000511467 TRIAP1O43715 76 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 VPREB1P12018 145 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 WFDC11Q8NEX6 87 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 SMIM1B2RUZ4 78 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 FHL2Q14192 279 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 ODF3L2Q3SX64 289 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 SPRNQ5BIV9 151 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 C1orf134Q5TEV5 83 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 IGFL4Q6B9Z1 124 aa3.52□□□□□ -1.85
PTPN13-209ENST00000511467 TRBV7-7A0A0K0K1E9 115 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 INAFM1C9JVW0 142 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 COL6A5A8TX70 2615 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 IGLV2-18A0A075B6J9 118 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 C16orf90A8MZG2 172 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 TLX1NBP0CAT3 122 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 TRBV7-4A0A0J9YYF1 115 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 LINC00242Q5T6M2 205 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 PLA2G1BP04054 148 aaKnown RBP3.51□□□□□ -1.85
PTPN13-209ENST00000511467 FAM19A1Q7Z5A9 133 aa3.51□□□□□ -1.85
PTPN13-209ENST00000511467 SETXQ7Z333 2677 aaKnown RBP3.5□□□□□ -1.85
PTPN13-209ENST00000511467 CEMP1Q6PRD7 247 aaPredicted RBP3.5□□□□□ -1.85
PTPN13-209ENST00000511467 Q6ZRP5 223 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 IGLV5-52A0A0A0MRZ9 124 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 Q6ZPA2 131 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 C14orf132Q9NPU4 83 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 C1orf229Q6ZS94 237 aaPredicted RBP3.5□□□□□ -1.85
PTPN13-209ENST00000511467 C6orf99Q4VX62 202 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 C2orf91Q6ZV80 131 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 NOTCH1P46531 2555 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 FRMD6-AS1P0C7T7 363 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 CYSRT1A8MQ03 144 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 PRB3Q04118 309 aaPredicted RBP3.5□□□□□ -1.85
PTPN13-209ENST00000511467 C1orf137Q5JT78 98 aa3.5□□□□□ -1.85
PTPN13-209ENST00000511467 K7ERJ3 54 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 ELOF1P60002 83 aaKnown RBP3.49□□□□□ -1.85
PTPN13-209ENST00000511467 SMIM11BQ8TCY0 68 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 C11orf72Q8NBR9 251 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 PLAC8L1A1L4L8 177 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 CLPSL2Q6UWE3 100 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 IGHV3OR16-9A0A0B4J2B5 98 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 CD164Q04900 197 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 LINC00575Q6W349 94 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 ESM1Q9NQ30 184 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 DEFB105AQ8NG35 78 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
PTPN13-209ENST00000511467 SSBP3-AS1Q7Z2R9 100 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 C6orf223Q8N319 242 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 PLA2G2EQ9NZK7 142 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 LYPD5Q6UWN5 251 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 MAPK1IP1LQ8NDC0 245 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 Q8NBF4 154 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 C19orf84I3L1E1 186 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 FAM229AH3BQW9 127 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 GDF5OSQ5U4N7 250 aa3.48□□□□□ -1.85
PTPN13-209ENST00000511467 LOC101927531A0A1B0GV80 90 aa3.47□□□□□ -1.85
PTPN13-209ENST00000511467 ACYP2P14621 99 aa3.47□□□□□ -1.85
PTPN13-209ENST00000511467 WFDC2Q14508 124 aa3.47□□□□□ -1.85
PTPN13-209ENST00000511467 BBC3Q96PG8 261 aaPredicted RBP3.47□□□□□ -1.85
PTPN13-209ENST00000511467 C22orf34Q6ZV56 151 aa3.47□□□□□ -1.85
PTPN13-209ENST00000511467 WWC2-AS2Q96NR7 200 aa3.47□□□□□ -1.85
PTPN13-209ENST00000511467 IGSF10Q6WRI0 2623 aa3.47□□□□□ -1.85
PTPN13-209ENST00000511467 CELA1Q9UNI1 258 aa3.47□□□□□ -1.85
PTPN13-209ENST00000511467 A8MUN3 132 aa3.46□□□□□ -1.85
PTPN13-209ENST00000511467 CRYGAP11844 174 aa3.46□□□□□ -1.85
PTPN13-209ENST00000511467 A0A0U1RQV1 116 aa3.46□□□□□ -1.86
PTPN13-209ENST00000511467 Q6ZQY7 126 aa3.46□□□□□ -1.86
PTPN13-209ENST00000511467 NCR3O14931 201 aa3.46□□□□□ -1.86
PTPN13-209ENST00000511467 LINC01547P58512 204 aaPredicted RBP3.46□□□□□ -1.86
PTPN13-209ENST00000511467 TRAV22A0A0B4J277 110 aa3.46□□□□□ -1.86
PTPN13-209ENST00000511467 SBSPONQ8IVN8 264 aa3.46□□□□□ -1.86
PTPN13-209ENST00000511467 LINC00612Q8N6U2 182 aa3.46□□□□□ -1.86
PTPN13-209ENST00000511467 DNAH12Q6ZR08 3092 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 CYP4F30PQ9H0H9 118 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 LINC01600Q96MT4 127 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 IGLV6-57P01721 117 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 APCP25054 2843 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 CCDC179H3BU77 68 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 OXLD1Q5BKU9 147 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 RNASE13Q5GAN3 156 aaKnown RBP3.45□□□□□ -1.86
PTPN13-209ENST00000511467 C1orf158Q8N1D5 194 aa3.45□□□□□ -1.86
PTPN13-209ENST00000511467 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
PTPN13-209ENST00000511467 Q6ZRX8 168 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms