RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FAM229BQ4G0N7 80 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 GLIPR1L1Q6UWM5 242 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 C6orf201Q7Z4U5 140 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 KRTAP13-1Q8IUC0 172 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 EXOC3-AS1Q8N2X6 119 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 CANT1Q8WVQ1 401 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 CKLFQ9UBR5 152 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 TP73-AS1Q9UF72 201 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 TIMM9Q9Y5J7 89 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 TRBV6-7A0A0A0MS04 114 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 TMEM212A6NML5 194 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 GNRH2O43555 120 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 SNAPC5O75971 98 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 CD2P06729 351 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 ZNF80P51504 273 aaPredicted RBP1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 LINC01554Q52M75 96 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 LYZL1Q6UWQ5 148 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 ENHOQ6UWT2 76 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 LHFPL1Q86WI0 220 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 OR8I2Q8N0Y5 310 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 HIST3H2BBQ8N257 126 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 OR5C1Q8NGR4 320 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 TERB2Q8NHR7 220 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 DNAJC9Q8WXX5 260 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 BORCS5Q969J3 196 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 SLC50A1Q9BRV3 221 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 FKBP11Q9NYL4 201 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 TAS2R8Q9NYW2 309 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 LAMTOR2Q9Y2Q5 125 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 UBE2D4Q9Y2X8 147 aa1.59□□□□□ -2.15
TOPBP1-208ENST00000511439 BORCS7-ASMTA0A0B4J1R7 106 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 MEIS3P1A6NDR6 274 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 G3V3Q6 166 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 FXYD1O00168 92 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 TAX1BP3O14907 124 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 TCL1BO95988 128 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 TRGC2P03986 189 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 IGLC1P0CG04 106 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 RPL28P46779 137 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 ERHP84090 104 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 NDUFA5Q16718 116 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 IFT20Q8IY31 132 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 IMMP2LQ96T52 175 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 ZNF471Q9BX82 626 aaPredicted RBP1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 OSTCQ9NRP0 149 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 NAT8Q9UHE5 227 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 NDUFA12Q9UI09 145 aa1.58□□□□□ -2.16
TOPBP1-208ENST00000511439 TRAV7A0A075B6U4 112 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 A0A1B0GX51 115 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 CRYM-AS1A6NIL9 109 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 C11orf86A6NJI1 115 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 A6NN06 94 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 C1orf196B1AJZ1 125 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 H3BT86 120 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 H7C2G1 150 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 J3KT08 172 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 ANGP03950 147 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 SHBGP04278 402 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 BCL2P10415 239 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 SNCAP37840 140 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 FXYD2P54710 66 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 UBE2BP63146 152 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 CATR1Q13166 79 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 PYDC2Q56P42 97 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 EIF5AL1Q6IS14 154 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 ARPINQ7Z6K5 226 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 BPIFA4PQ86YQ2 179 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 OR5A1Q8NGJ0 315 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 OR5AK2Q8NH90 309 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 HIST1H2BLQ99880 126 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 NHP2Q9NX24 153 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 MRPL36Q9P0J6 103 aaKnown RBP1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 GSKIPQ9P0R6 139 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 EPDR1Q9UM22 224 aa1.57□□□□□ -2.16
TOPBP1-208ENST00000511439 TRBV10-2A0A0K0K1G8 114 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 TRBV6-4A0A1B0GX49 114 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 C7orf71A4D174 169 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 BBIP1A8MTZ0 92 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 ARPC5O15511 151 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 SLC25A5P05141 298 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 METTL15P1P0C7V9 234 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 QRFPP83859 136 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 ZNF90Q03938 601 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 PRR15Q8IV56 129 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 ARHGAP5-AS1Q96IT6 56 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 ODF3Q96PU9 254 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 TSC22D3Q99576 134 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 TMEM126AQ9H061 195 aa1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-208ENST00000511439 TRDV1A0A1B0GX56 115 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 A0A1W2PNM2 257 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 EFCAB10A6NFE3 127 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 TMEM262E9PQX1 116 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 M0R378 163 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 UBBP0CG47 229 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 SLC25A4P12235 298 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 RNASE4P34096 147 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms