RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SPTBN2O15020 2390 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 ZNF407Q9C0G0 2248 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 MYO7BQ6PIF6 2116 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 NCOR2Q9Y618 2525 aa3.13□□□□□ -1.91
HMGB3P13-201ENST00000511263 MED12Q93074 2177 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 IGKV1D-37A0A075B6S9 117 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 LOC110117498A0A087WWA1 95 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 H3BRN7 92 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 CTSGP08311 255 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 CGB3P0DN86 165 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 CGB7P0DN87 165 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 DEFB114Q30KQ6 69 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 C11orf71Q6IPW1 123 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 Q9BRP9 147 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 LINC00467Q9BRT7 94 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 CDC42SE2Q9NRR3 84 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 NDUFA4L2Q9NRX3 87 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 ACACBO00763 2458 aa3.12□□□□□ -1.91
HMGB3P13-201ENST00000511263 CFAP54Q96N23 3096 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 DSCAMO60469 2012 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 IGHV1OR15-1A0A075B7D0 117 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 LYZP61626 148 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 MIR7-3HGQ8N6C7 128 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 LINC00308Q8TCZ7 52 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 RNF5Q99942 180 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 RETNLBQ9BQ08 111 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 XAGE1AQ9HD64 81 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 CELA1Q9UNI1 258 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 CACNA1GO43497 2377 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 ESPL1Q14674 2120 aa3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 ANKRD11Q6UB99 2663 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P13-201ENST00000511263 TRAV10A0A0B4J240 114 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 TRBV6-5A0A0K0K1A5 114 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 HAMPP81172 84 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 TMEM167AQ8TBQ9 72 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 ZNF625Q96I27 306 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 LENEPQ9Y5L5 61 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 COL6A6A6NMZ7 2263 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 DCHS1Q96JQ0 3298 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 CEP295Q9C0D2 2601 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 DMXL1Q9Y485 3027 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 SPTA1P02549 2419 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 INTS1Q8N201 2190 aaKnown RBP3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 SPEGQ15772 3267 aa3.1□□□□□ -1.91
HMGB3P13-201ENST00000511263 DMXL2Q8TDJ6 3036 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 TET2Q6N021 2002 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 LCE6AA0A183 80 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 NCR3O14931 201 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 LY6HO94772 140 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 PRB1P04280 392 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 SPANXA2-OT1Q8N9U9 137 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 WFDC9Q8NEX5 89 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 CCL19Q99731 98 aa3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 FGF23Q9GZV9 251 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P13-201ENST00000511263 ATRXP46100 2492 aa3.09□□□□□ -1.92
HMGB3P13-201ENST00000511263 RP1L1Q8IWN7 2480 aaPredicted RBP3.09□□□□□ -1.92
HMGB3P13-201ENST00000511263 ZGRF1Q86YA3 2104 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 ZFHX4Q86UP3 3567 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 TLN1Q9Y490 2541 aaKnown RBP3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV7-4-1A0A0J9YVY3 117 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 TRBV10-1A0A0K0K1A3 114 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 B4DSR2 109 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 MGPP08493 103 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 POLR2KP53803 58 aaKnown RBP3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 MOBPQ13875 183 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 DEFB113Q30KQ7 82 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 ZNF702PQ9H963 129 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 LAMA5O15230 3695 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 USF3Q68DE3 2245 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 RTTNQ86VV8 2226 aa3.08□□□□□ -1.92
HMGB3P13-201ENST00000511263 AKAP13Q12802 2813 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 FREM1Q5H8C1 2179 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 LECT2O14960 151 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 NDPQ00604 133 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 MINOS1Q5TGZ0 78 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 Q6ZQT0 140 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 DEFB108BQ8NET1 73 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 LINC00208Q96KT6 92 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 GAFA1Q96PS6 74 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 KLK9Q9UKQ9 250 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 MINOS1-NBL1R4GNA1 71 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 PIEZO2Q9H5I5 2752 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 ARFGEF3Q5TH69 2177 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGF2RP11717 2491 aa3.07□□□□□ -1.92
HMGB3P13-201ENST00000511263 MGAQ8IWI9 3026 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 FREM2Q5SZK8 3169 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3-64A0A075B6Q5 118 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGKV2-40A0A087WW87 121 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3-43A0A0B4J1X8 118 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 H3BPC8 53 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 LY6G6DO95868 133 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGKV2D-40P01614 121 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 IGHV3-43DP0DP04 118 aa3.06□□□□□ -1.92
HMGB3P13-201ENST00000511263 C17orf58Q2M2W7 97 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms