RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 KIAA0087Q14695 138 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 PYDC2Q56P42 97 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 IGFL1Q6UW32 110 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 MRPL55Q7Z7F7 128 aaKnown RBP3.01□□□□□ -1.93
USP53-206ENST00000510737 MRPL52Q86TS9 123 aaKnown RBP3.01□□□□□ -1.93
USP53-206ENST00000510737 LINC00469Q8N7U9 141 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 HIST1H2BAQ96A08 127 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 RPL39LQ96EH5 51 aaKnown RBP3.01□□□□□ -1.93
USP53-206ENST00000510737 TMEM167BQ9NRX6 74 aa3.01□□□□□ -1.93
USP53-206ENST00000510737 BTCP35070 178 aa3□□□□□ -1.93
USP53-206ENST00000510737 FOXA3P55318 350 aaPredicted RBP3□□□□□ -1.93
USP53-206ENST00000510737 UBE2G2P60604 165 aa3□□□□□ -1.93
USP53-206ENST00000510737 RNASE13Q5GAN3 156 aaKnown RBP3□□□□□ -1.93
USP53-206ENST00000510737 Q6Q795 121 aa3□□□□□ -1.93
USP53-206ENST00000510737 C2orf82Q6UX34 121 aa3□□□□□ -1.93
USP53-206ENST00000510737 SMIM3Q9BZL3 60 aa3□□□□□ -1.93
USP53-206ENST00000510737 Q9H521 79 aa3□□□□□ -1.93
USP53-206ENST00000510737 XAGE1AQ9HD64 81 aa3□□□□□ -1.93
USP53-206ENST00000510737 VCX3AQ9NNX9 186 aa3□□□□□ -1.93
USP53-206ENST00000510737 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
USP53-206ENST00000510737 NDUFA12Q9UI09 145 aa3□□□□□ -1.93
USP53-206ENST00000510737 IGHV3OR16-9A0A0B4J2B5 98 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 ZNF727A8MUV8 499 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 CXorf1O96002 111 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 IGLC6P0CF74 106 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 DEFA1P59665 94 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 PRLHP81277 87 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 FMC1Q96HJ9 113 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 SEC22CQ9BRL7 303 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 V9GYH0 126 aa2.99□□□□□ -1.93
USP53-206ENST00000510737 TRBV30A0A0K0K1B3 111 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 NAP1L6A6NFF2 107 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 SDHAF1A6NFY7 115 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 C9orf92A6NGG3 77 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 FAM74A7A6NL05 159 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 INMT-MINDY4F8WBC2 141 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 I3L3M4 83 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 SLC25A20O43772 301 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 PMCHP20382 165 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 UBE2G1P62253 170 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 HERV-K104P63124 156 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 TPPP3Q9BW30 176 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 RNASE7Q9H1E1 156 aaKnown RBP2.98□□□□□ -1.93
USP53-206ENST00000510737 NDUFA13Q9P0J0 144 aa2.98□□□□□ -1.93
USP53-206ENST00000510737 SIX6O95475 246 aa2.97□□□□□ -1.93
USP53-206ENST00000510737 MRAP2Q96G30 205 aa2.97□□□□□ -1.93
USP53-206ENST00000510737 TMEM242Q9NWH2 141 aa2.97□□□□□ -1.93
USP53-206ENST00000510737 HSPB11Q9Y547 144 aa2.97□□□□□ -1.93
USP53-206ENST00000510737 A0A0J9YXY3 114 aa2.96□□□□□ -1.94
USP53-206ENST00000510737 ATP6V0CP27449 155 aa2.96□□□□□ -1.94
USP53-206ENST00000510737 RPS29P62273 56 aaKnown RBP2.96□□□□□ -1.94
USP53-206ENST00000510737 ZNF726P1Q15940 193 aa2.96□□□□□ -1.94
USP53-206ENST00000510737 FAM19A2Q8N3H0 131 aa2.96□□□□□ -1.94
USP53-206ENST00000510737 CSDC2Q9Y534 153 aaKnown RBP2.96□□□□□ -1.94
USP53-206ENST00000510737 TRGC1P0CF51 173 aa2.95□□□□□ -1.94
USP53-206ENST00000510737 LYZL1Q6UWQ5 148 aa2.95□□□□□ -1.94
USP53-206ENST00000510737 BAGE2Q86Y30 109 aa2.95□□□□□ -1.94
USP53-206ENST00000510737 SPRR4Q96PI1 79 aa2.95□□□□□ -1.94
USP53-206ENST00000510737 NKX6-2Q9C056 277 aaPredicted RBP2.95□□□□□ -1.94
USP53-206ENST00000510737 ACTR3CQ9C0K3 210 aaPredicted RBP2.95□□□□□ -1.94
USP53-206ENST00000510737 TRBV6-5A0A0K0K1A5 114 aa2.94□□□□□ -1.94
USP53-206ENST00000510737 C7orf77A4D0Y5 90 aa2.94□□□□□ -1.94
USP53-206ENST00000510737 F2Z2F3 143 aa2.94□□□□□ -1.94
USP53-206ENST00000510737 SCO1O75880 301 aa2.94□□□□□ -1.94
USP53-206ENST00000510737 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
USP53-206ENST00000510737 Q6ZUT4 128 aa2.94□□□□□ -1.94
USP53-206ENST00000510737 FAM19A1Q7Z5A9 133 aa2.94□□□□□ -1.94
USP53-206ENST00000510737 CBLN2Q8IUK8 224 aa2.94□□□□□ -1.94
USP53-206ENST00000510737 TMEM238C9JI98 176 aa2.93□□□□□ -1.94
USP53-206ENST00000510737 LGALS3P17931 250 aaKnown RBP2.93□□□□□ -1.94
USP53-206ENST00000510737 AKR1C3P42330 323 aa2.93□□□□□ -1.94
USP53-206ENST00000510737 C9orf62Q8N4C0 152 aa2.93□□□□□ -1.94
USP53-206ENST00000510737 CCDC160A6NGH7 325 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 PLA2G10O15496 165 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 MBP02144 154 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 RPS20P60866 119 aaKnown RBP2.92□□□□□ -1.94
USP53-206ENST00000510737 RPL37P61927 97 aaKnown RBP2.92□□□□□ -1.94
USP53-206ENST00000510737 FAM210AQ96ND0 272 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 PSMG3Q9BT73 122 aaPredicted RBP2.92□□□□□ -1.94
USP53-206ENST00000510737 HIGD2AQ9BW72 106 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 GNB1LQ9BYB4 327 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 TMEM126AQ9H061 195 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 ST20Q9HBF5 79 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 TNFSF18Q9UNG2 199 aa2.92□□□□□ -1.94
USP53-206ENST00000510737 TRBV27A0A0K0K1C4 114 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 CENPXA8MT69 81 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 M0R378 163 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 ATP6V1G2O95670 118 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 IFNA1P01562 189 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 IGLV6-57P01721 117 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 S100A9P06702 114 aaKnown RBP2.91□□□□□ -1.94
USP53-206ENST00000510737 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 HERVK_113P61574 105 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 SERF2P84101 59 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 STOML3Q8TAV4 291 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 PPP1R1CQ8WVI7 109 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 CCDC32Q9BV29 185 aa2.91□□□□□ -1.94
USP53-206ENST00000510737 MPC2O95563 127 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 H2BFSP57053 126 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms