RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 HERV-K104P63124 156 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 C6orf226Q5I0X4 101 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 NDUFA12Q9UI09 145 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 DNAH1Q9P2D7 4330 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
RFC1-211ENST00000509084 TSTD3H0UI37 97 aa6.86□□□□□ -1.31
RFC1-211ENST00000509084 DLEU1O43261 78 aa6.86□□□□□ -1.31
RFC1-211ENST00000509084 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
RFC1-211ENST00000509084 KIAA0087Q14695 138 aa6.86□□□□□ -1.31
RFC1-211ENST00000509084 SLC25A34Q6PIV7 304 aa6.86□□□□□ -1.31
RFC1-211ENST00000509084 MAPKAPK5-AS1Q8N8E1 139 aa6.86□□□□□ -1.31
RFC1-211ENST00000509084 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
RFC1-211ENST00000509084 HIGD2BQ4VC39 106 aa6.85□□□□□ -1.31
RFC1-211ENST00000509084 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
RFC1-211ENST00000509084 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
RFC1-211ENST00000509084 PCP2Q8IVA1 136 aa6.84□□□□□ -1.31
RFC1-211ENST00000509084 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
RFC1-211ENST00000509084 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
RFC1-211ENST00000509084 C14orf144Q96I85 54 aa6.84□□□□□ -1.31
RFC1-211ENST00000509084 CAMK2N2Q96S95 79 aa6.84□□□□□ -1.31
RFC1-211ENST00000509084 DNAH6Q9C0G6 4158 aa6.83□□□□□ -1.32
RFC1-211ENST00000509084 SCGB1D4Q6XE38 83 aa6.83□□□□□ -1.32
RFC1-211ENST00000509084 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
RFC1-211ENST00000509084 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
RFC1-211ENST00000509084 SYCNQ0VAF6 134 aa6.82□□□□□ -1.32
RFC1-211ENST00000509084 CIRBPQ14011 172 aaKnown RBP6.82□□□□□ -1.32
RFC1-211ENST00000509084 TTTY13Q9BZ97 58 aa6.82□□□□□ -1.32
RFC1-211ENST00000509084 A0A087WTM6 91 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
RFC1-211ENST00000509084 TMEM238C9JI98 176 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 LECT2O14960 151 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 TIMM17BO60830 172 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 GCSHP23434 173 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 C2orf82Q6UX34 121 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 CARD19Q96LW7 228 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 MIEN1Q9BRT3 115 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 PRO1933Q9H354 126 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 PKIGQ9Y2B9 76 aa6.81□□□□□ -1.32
RFC1-211ENST00000509084 LYSTQ99698 3801 aa6.8□□□□□ -1.32
RFC1-211ENST00000509084 A0A0J9YXY3 114 aa6.8□□□□□ -1.32
RFC1-211ENST00000509084 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
RFC1-211ENST00000509084 COX17Q14061 63 aa6.8□□□□□ -1.32
RFC1-211ENST00000509084 WFDC2Q14508 124 aa6.8□□□□□ -1.32
RFC1-211ENST00000509084 Q8N814 137 aa6.8□□□□□ -1.32
RFC1-211ENST00000509084 LINC00526Q96FQ7 95 aa6.8□□□□□ -1.32
RFC1-211ENST00000509084 HIGD1BQ9P298 99 aa6.8□□□□□ -1.32
RFC1-211ENST00000509084 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
RFC1-211ENST00000509084 UNQ6190/PRO20217Q6UXQ8 127 aa6.79□□□□□ -1.32
RFC1-211ENST00000509084 Q6ZRU5 148 aa6.79□□□□□ -1.32
RFC1-211ENST00000509084 LINC00336Q6ZUF6 198 aa6.79□□□□□ -1.32
RFC1-211ENST00000509084 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
RFC1-211ENST00000509084 ERG28Q9UKR5 140 aa6.79□□□□□ -1.32
RFC1-211ENST00000509084 RTL8CO15255 209 aa6.78□□□□□ -1.32
RFC1-211ENST00000509084 Q6ZVH6 145 aa6.78□□□□□ -1.32
RFC1-211ENST00000509084 COPS9Q8WXC6 57 aa6.78□□□□□ -1.32
RFC1-211ENST00000509084 C6orf48Q9UBA6 75 aa6.78□□□□□ -1.32
RFC1-211ENST00000509084 LINC00158P58513 81 aa6.77□□□□□ -1.33
RFC1-211ENST00000509084 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
RFC1-211ENST00000509084 C2orf91Q6ZV80 131 aa6.77□□□□□ -1.33
RFC1-211ENST00000509084 SPANXDQ9BXN6 97 aa6.77□□□□□ -1.33
RFC1-211ENST00000509084 SPANXCQ9NY87 97 aa6.77□□□□□ -1.33
RFC1-211ENST00000509084 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.76□□□□□ -1.33
RFC1-211ENST00000509084 TLX1NBP0CAT3 122 aa6.76□□□□□ -1.33
RFC1-211ENST00000509084 SMIM13P0DJ93 91 aa6.76□□□□□ -1.33
RFC1-211ENST00000509084 TAL2Q16559 108 aa6.76□□□□□ -1.33
RFC1-211ENST00000509084 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
RFC1-211ENST00000509084 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
RFC1-211ENST00000509084 NDUFC2-KCTD14E9PQ53 114 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 SLPIP03973 132 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 IFITM1P13164 125 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 DDTP30046 118 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 PFN2P35080 140 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 SRSF9Q13242 221 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFC1-211ENST00000509084 LITAFQ99732 161 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 SACSQ9NZJ4 4579 aa6.75□□□□□ -1.33
RFC1-211ENST00000509084 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
RFC1-211ENST00000509084 HSD52Q0P140 79 aa6.74□□□□□ -1.33
RFC1-211ENST00000509084 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
RFC1-211ENST00000509084 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
RFC1-211ENST00000509084 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
RFC1-211ENST00000509084 A0A0U1RRA0 63 aa6.73□□□□□ -1.33
RFC1-211ENST00000509084 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
RFC1-211ENST00000509084 PTTG1IPP53801 180 aa6.73□□□□□ -1.33
RFC1-211ENST00000509084 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
RFC1-211ENST00000509084 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
RFC1-211ENST00000509084 M0R143 59 aa6.72□□□□□ -1.33
RFC1-211ENST00000509084 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
RFC1-211ENST00000509084 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
RFC1-211ENST00000509084 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
RFC1-211ENST00000509084 RPL24P83731 157 aaKnown RBP6.71□□□□□ -1.34
RFC1-211ENST00000509084 ADAMTSL4-AS1Q5T5F5 129 aa6.71□□□□□ -1.34
RFC1-211ENST00000509084 CEND1Q8N111 149 aa6.71□□□□□ -1.34
RFC1-211ENST00000509084 LINC00308Q8TCZ7 52 aa6.71□□□□□ -1.34
RFC1-211ENST00000509084 DNAH10Q8IVF4 4471 aa6.71□□□□□ -1.34
RFC1-211ENST00000509084 HYDINQ4G0P3 5121 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms