RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 A0A1B0GV72 72 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 BCL2L11O43521 198 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 APOMO95445 188 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 CCL20P78556 96 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 RNASE13Q5GAN3 156 aaKnown RBP3.19□□□□□ -1.9
AFP-204ENST00000508838 COA6Q5JTJ3 125 aaKnown RBP3.19□□□□□ -1.9
AFP-204ENST00000508838 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 DIRC1Q969H9 104 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 OPRPNQ99935 248 aaPredicted RBP3.19□□□□□ -1.9
AFP-204ENST00000508838 RETNLBQ9BQ08 111 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 NKX6-2Q9C056 277 aaPredicted RBP3.19□□□□□ -1.9
AFP-204ENST00000508838 TMEM242Q9NWH2 141 aa3.19□□□□□ -1.9
AFP-204ENST00000508838 TGIF2-C20orf24A0A0A6YYL0 155 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 SDHAF1A6NFY7 115 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 SMAGPQ0VAQ4 97 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 C9orf129Q5T035 196 aaKnown RBP3.18□□□□□ -1.9
AFP-204ENST00000508838 C1orf195Q5TG92 126 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 Q6ZUT4 128 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 BAGE2Q86Y30 109 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 MBD3L1Q8WWY6 194 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 BTF3L4Q96K17 158 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 CDC42SE2Q9NRR3 84 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 C6orf48Q9UBA6 75 aa3.18□□□□□ -1.9
AFP-204ENST00000508838 FXYD6-FXYD2A0A087WZ82 144 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 TRBV6-5A0A0K0K1A5 114 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 H7C423 109 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 UBE2L6O14933 153 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 NDUFS5O43920 106 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 NCR2O95944 276 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 APCSP02743 223 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 GIPP09681 153 aaPredicted RBP3.17□□□□□ -1.9
AFP-204ENST00000508838 SMIM17P0DL12 118 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 ZNF25P17030 456 aaPredicted RBP3.17□□□□□ -1.9
AFP-204ENST00000508838 LINC01547P58512 204 aaPredicted RBP3.17□□□□□ -1.9
AFP-204ENST00000508838 TPRXLQ17RH7 258 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
AFP-204ENST00000508838 LINC00614P0C842 121 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 POLR2KP53803 58 aaKnown RBP3.16□□□□□ -1.9
AFP-204ENST00000508838 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 SS18Q15532 418 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 AKR1C8PQ5T2L2 129 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 SMIM29Q86T20 159 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 C9orf62Q8N4C0 152 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 Q8NBF4 154 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 S100ZQ8WXG8 99 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 SMDT1Q9H4I9 107 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 UBE2D4Q9Y2X8 147 aa3.16□□□□□ -1.9
AFP-204ENST00000508838 TRBV27A0A0K0K1C4 114 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 TRGC1P0CF51 173 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 PMVKQ15126 192 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 AMMECR1LQ6DCA0 310 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 LINC00173Q6ZV60 143 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 C5orf38Q86SI9 138 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 FAM213BQ8TBF2 198 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 CAMK2N2Q96S95 79 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 SIGMAR1Q99720 223 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.91
AFP-204ENST00000508838 USH2AO75445 5202 aa3.15□□□□□ -1.91
AFP-204ENST00000508838 IGLV7-46A0A075B6I9 117 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 BORCS7-ASMTA0A0B4J1R7 106 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 COX7A2LO14548 114 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 PSPHP1O15172 72 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 ARPC5O15511 151 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 UNQ6190/PRO20217Q6UXQ8 127 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 SFT2D1Q8WV19 159 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 ANAPC11Q9NYG5 84 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 PKIGQ9Y2B9 76 aa3.14□□□□□ -1.91
AFP-204ENST00000508838 CARHSP1Q9Y2V2 147 aaKnown RBP3.14□□□□□ -1.91
AFP-204ENST00000508838 IGLV8-61A0A075B6I0 122 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 A0A1B0GXF2 115 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 C7orf77A4D0Y5 90 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 F2Z2F3 143 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 RPS20P60866 119 aaKnown RBP3.13□□□□□ -1.91
AFP-204ENST00000508838 RAB5BP61020 215 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 MT1HP80294 61 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 BATFQ16520 125 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 KCNRGQ8N5I3 272 aa3.13□□□□□ -1.91
AFP-204ENST00000508838 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 TRAV13-1A0A0B4J241 112 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 TRAV1-1A0A0B4J248 108 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 I3L3M4 83 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 ZNF861PO60384 105 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 PFDN1O60925 122 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 IFNA1P01562 189 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 DDTP30046 118 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 UBE2D1P51668 147 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 RPL39P62891 51 aaKnown RBP3.12□□□□□ -1.91
AFP-204ENST00000508838 CXCL6P80162 114 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 ZNF345Q14585 488 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 C6orf99Q4VX62 202 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 C2orf82Q6UX34 121 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 OR10D4PQ8NGN7 298 aa3.12□□□□□ -1.91
AFP-204ENST00000508838 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms