RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ZNF861PO60384 105 aa5.08□□□□□ -1.6
COL4A3BP-206ENST00000508809 RIGQ13278 110 aa5.08□□□□□ -1.6
COL4A3BP-206ENST00000508809 MRPL51Q4U2R6 128 aaKnown RBP5.08□□□□□ -1.6
COL4A3BP-206ENST00000508809 FAM104BQ5XKR9 115 aa5.08□□□□□ -1.6
COL4A3BP-206ENST00000508809 LINC01551Q86U37 167 aa5.08□□□□□ -1.6
COL4A3BP-206ENST00000508809 C20orf78Q9BR46 151 aa5.08□□□□□ -1.6
COL4A3BP-206ENST00000508809 TRBV30A0A0K0K1B3 111 aa5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 LINC00862A6NCI5 91 aa5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 M0QXV9 152 aa5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 TCAPO15273 167 aa5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 RPL39P62891 51 aaKnown RBP5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 UBE2BP63146 152 aa5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 C9orf129Q5T035 196 aaKnown RBP5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 SPANXA1Q9NS26 97 aa5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 V9GYV3 84 aa5.07□□□□□ -1.6
COL4A3BP-206ENST00000508809 NDUFC2-KCTD14E9PQ53 114 aa5.06□□□□□ -1.6
COL4A3BP-206ENST00000508809 UBE2V1Q13404 147 aa5.06□□□□□ -1.6
COL4A3BP-206ENST00000508809 TCTE3Q8IZS6 198 aa5.06□□□□□ -1.6
COL4A3BP-206ENST00000508809 SMIM7Q9BQ49 75 aa5.06□□□□□ -1.6
COL4A3BP-206ENST00000508809 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
COL4A3BP-206ENST00000508809 HBBP68871 147 aa5.05□□□□□ -1.6
COL4A3BP-206ENST00000508809 LINC01561Q8N1V8 128 aa5.05□□□□□ -1.6
COL4A3BP-206ENST00000508809 PCP4L1A6NKN8 68 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 NUPR1O60356 82 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 TSPAN13O95857 204 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 CKS2P33552 79 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 CEBPGP53567 150 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 FAM74A3Q4VXF1 159 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 LINC00242Q5T6M2 205 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 ERASQ7Z444 233 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 SMIM2Q9BVW6 85 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 NAT8BQ9UHF3 227 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 PYGO1Q9Y3Y4 419 aa5.04□□□□□ -1.6
COL4A3BP-206ENST00000508809 A0A087X002 238 aa5.03□□□□□ -1.6
COL4A3BP-206ENST00000508809 TGIF2-C20orf24A0A0A6YYL0 155 aa5.03□□□□□ -1.6
COL4A3BP-206ENST00000508809 A0A1B0GW15 77 aa5.03□□□□□ -1.6
COL4A3BP-206ENST00000508809 ZNF727A8MUV8 499 aa5.03□□□□□ -1.6
COL4A3BP-206ENST00000508809 PACRGQ96M98 296 aaPredicted RBP5.03□□□□□ -1.6
COL4A3BP-206ENST00000508809 C22orf24Q9Y442 160 aa5.03□□□□□ -1.6
COL4A3BP-206ENST00000508809 SMIM27A0A1W2PRY6 76 aa5.02□□□□□ -1.61
COL4A3BP-206ENST00000508809 SRP19P09132 144 aaKnown RBP5.02□□□□□ -1.61
COL4A3BP-206ENST00000508809 EIF5A2Q9GZV4 153 aaKnown RBP5.02□□□□□ -1.61
COL4A3BP-206ENST00000508809 IGLV4-3A0A075B6K6 122 aa5.01□□□□□ -1.61
COL4A3BP-206ENST00000508809 HSBP1L1C9JCN9 74 aa5.01□□□□□ -1.61
COL4A3BP-206ENST00000508809 CRYGAP11844 174 aa5.01□□□□□ -1.61
COL4A3BP-206ENST00000508809 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
COL4A3BP-206ENST00000508809 ALKAL2Q6UX46 152 aa5.01□□□□□ -1.61
COL4A3BP-206ENST00000508809 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
COL4A3BP-206ENST00000508809 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
COL4A3BP-206ENST00000508809 D6R8Y8 96 aa5□□□□□ -1.61
COL4A3BP-206ENST00000508809 BCE1O60756 84 aa5□□□□□ -1.61
COL4A3BP-206ENST00000508809 NPYP01303 97 aa5□□□□□ -1.61
COL4A3BP-206ENST00000508809 PPBPP02775 128 aa5□□□□□ -1.61
COL4A3BP-206ENST00000508809 IFI27P40305 119 aaPredicted RBP5□□□□□ -1.61
COL4A3BP-206ENST00000508809 RPL28P46779 137 aaKnown RBP5□□□□□ -1.61
COL4A3BP-206ENST00000508809 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
COL4A3BP-206ENST00000508809 RPL23P62829 140 aaKnown RBP5□□□□□ -1.61
COL4A3BP-206ENST00000508809 TMEM141Q96I45 108 aa5□□□□□ -1.61
COL4A3BP-206ENST00000508809 A0A1B0GXF2 115 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 F8W036 122 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 CTAG1AP78358 180 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 PNRC1Q12796 327 aaPredicted RBP4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 KRTAP13-2Q52LG2 175 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 Q6ZN92 141 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 FAM19A3Q7Z5A8 133 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 AMELXQ99217 191 aa4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 ALKBH7Q9BT30 221 aaPredicted RBP4.99□□□□□ -1.61
COL4A3BP-206ENST00000508809 S100A8P05109 93 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 RAB5AP20339 215 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 HERV-K104P63124 156 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 C6orf226Q5I0X4 101 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 C2orf66Q6UXQ4 117 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 TEX43Q6ZNM6 134 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 LINC00173Q6ZV60 143 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 MRPL55Q7Z7F7 128 aaKnown RBP4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 Q8IZM0 81 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 XAGE1AQ9HD64 81 aa4.98□□□□□ -1.61
COL4A3BP-206ENST00000508809 CKS1BP61024 79 aa4.97□□□□□ -1.61
COL4A3BP-206ENST00000508809 FAM229BQ4G0N7 80 aa4.97□□□□□ -1.61
COL4A3BP-206ENST00000508809 PAPPA-AS1Q5QFB9 102 aa4.97□□□□□ -1.61
COL4A3BP-206ENST00000508809 TMEM136Q6ZRR5 245 aa4.97□□□□□ -1.61
COL4A3BP-206ENST00000508809 ORMDL3Q8N138 153 aa4.97□□□□□ -1.61
COL4A3BP-206ENST00000508809 LINC00167Q96N53 147 aa4.97□□□□□ -1.61
COL4A3BP-206ENST00000508809 ANAPC11Q9NYG5 84 aa4.97□□□□□ -1.61
COL4A3BP-206ENST00000508809 C9JQL5 133 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 ADIRFQ15847 76 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 ZC2HC1BQ5TFG8 222 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 MRPL54Q6P161 138 aaKnown RBP4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 PRELID3AQ96N28 172 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 C2orf88Q9BSF0 95 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 TOMM7Q9P0U1 55 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 NAT8Q9UHE5 227 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
COL4A3BP-206ENST00000508809 IGIPA6NJ69 53 aa4.95□□□□□ -1.62
COL4A3BP-206ENST00000508809 F8VRH5 84 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms