RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 C16orf95Q9H693 158 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 NOTCH1P46531 2555 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 HIVEP2P31629 2446 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 TGP01266 2768 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 INTS1Q8N201 2190 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 IGLV11-55A0A075B6I3 123 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 IBA57-AS1B1ANH7 110 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 F6UB75 175 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 IGHV1-2P23083 117 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 FAM19A1Q7Z5A9 133 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 GPHB5Q86YW7 130 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 LINC00308Q8TCZ7 52 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 RPL39LQ96EH5 51 aaKnown RBP3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 TTTY12Q9BZ98 90 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 ORMDL1Q9P0S3 153 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 KAAG1Q9UBP8 84 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 MXRA5Q9NR99 2828 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 SEC16AO15027 2179 aa3.24□□□□□ -1.89
PDLIM5-211ENST00000508531 IGLV7-46A0A075B6I9 117 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 FAM223BA6NKX1 122 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 TMEM256-PLSCR3K7ERE1 68 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 IGHV1-8P0DP01 117 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 CD28P10747 220 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 CXCL6P80162 114 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 ESRGQ1W209 222 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 KLK9Q2XQG4 91 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 VMO1Q7Z5L0 202 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 NPBQ8NG41 125 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 KLK9Q9UKQ9 250 aa3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 SONP18583 2426 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-211ENST00000508531 ANK2Q01484 3957 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 IGLV4-3A0A075B6K6 122 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 TRAV12-3A0A0B4J271 114 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 IGHV3-64DA0A0J9YX35 117 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 A8MZ25 164 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 NDUFS5O43920 106 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 MIFP14174 115 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 IGFL3Q6UXB1 125 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 FP248Q71RG6 208 aaPredicted RBP3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 LINC00846Q9NV44 126 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 CTSZQ9UBR2 303 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 KIF25-AS1Q9Y6Z4 181 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 DSCAML1Q8TD84 2053 aa3.22□□□□□ -1.89
PDLIM5-211ENST00000508531 NBEAL2Q6ZNJ1 2754 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 TRAV23DV6A0A075B6W5 121 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 IGHV3-21A0A0B4J1V1 117 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 A0A0J9YXV3 536 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 TMEM89A2RUT3 159 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 F8WEM9 126 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 BUB1B-PAK6H3BSN5 160 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 IGLV1-47P01700 117 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 TRBV12-3P01733 135 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 SNRPD3P62318 126 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 FAM19A3Q7Z5A8 133 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 FAM223AQ8IWN6 122 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 HES7Q9BYE0 225 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 CYSTM1Q9H1C7 97 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 TNCP24821 2201 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 SVEP1Q4LDE5 3571 aa3.21□□□□□ -1.9
PDLIM5-211ENST00000508531 ANK3Q12955 4377 aaKnown RBP3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.2□□□□□ -1.94e-6■□□□□ 9.7
PDLIM5-211ENST00000508531 IGHV4-61A0A0C4DH41 118 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 PINLYPA6NC86 204 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 IGHV1-46P01743 117 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 IGHV4-59P01825 116 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 TFF1P04155 84 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 CTSGP08311 255 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 LINC00315P59091 139 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 DAD1P61803 113 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 RPL39P62891 51 aaKnown RBP3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 UBE2BP63146 152 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 Q1T7F1 81 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 DEFB113Q30KQ7 82 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 RETNQ9HD89 108 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 C14orf132Q9NPU4 83 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 SPRR3Q9UBC9 169 aa3.2□□□□□ -1.9
PDLIM5-211ENST00000508531 MED12Q93074 2177 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 ZANQ9Y493 2812 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 A0A087WVE0 104 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 LOC110117498A0A087WWA1 95 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 M0QY20 66 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 M0R1B8 84 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 UBE2L6O14933 153 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 CCL3L1P16619 93 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 SAA4P35542 130 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 FUSP35637 526 aaKnown RBP eCLIP3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 C15orf32Q32M92 178 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 CD164L2Q6UWJ8 174 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 ZFAND2AQ8N6M9 145 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 CNEP1R1Q8N9A8 125 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 DEFB108BQ8NET1 73 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 RNASE6Q93091 150 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 LINC00167Q96N53 147 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms