RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 ZNF580Q9UK33 172 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 TNCP24821 2201 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 DYSFO75923 2080 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 CYSRT1A8MQ03 144 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 TSHBP01222 138 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.79□□□□□ -1.48
PDE6A-202ENST00000508173 LINC00574Q9H8X3 128 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 Q6ZQY7 126 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 EPG5Q9HCE0 2579 aa5.79□□□□□ -1.48
PDE6A-202ENST00000508173 Q8IZM0 81 aa5.78□□□□□ -1.48
PDE6A-202ENST00000508173 CDSNQ15517 529 aa5.78□□□□□ -1.48
PDE6A-202ENST00000508173 FLNBO75369 2602 aaKnown RBP5.78□□□□□ -1.48
PDE6A-202ENST00000508173 ZFAND3Q9H8U3 227 aa5.78□□□□□ -1.48
PDE6A-202ENST00000508173 NDUFC1O43677 76 aa5.77□□□□□ -1.48
PDE6A-202ENST00000508173 Q9BRP9 147 aa5.77□□□□□ -1.48
PDE6A-202ENST00000508173 SPINK1P00995 79 aa5.77□□□□□ -1.49
PDE6A-202ENST00000508173 RNASE3P12724 160 aaKnown RBP5.77□□□□□ -1.49
PDE6A-202ENST00000508173 COX6A2Q02221 97 aa5.77□□□□□ -1.49
PDE6A-202ENST00000508173 SMIM11BQ8TCY0 68 aa5.77□□□□□ -1.49
PDE6A-202ENST00000508173 SOSTDC1Q6X4U4 206 aa5.77□□□□□ -1.49
PDE6A-202ENST00000508173 TRBV6-5A0A0K0K1A5 114 aa5.77□□□□□ -1.49
PDE6A-202ENST00000508173 Q8N2B8 174 aa5.76□□□□□ -1.49
PDE6A-202ENST00000508173 FAM19A3Q7Z5A8 133 aa5.76□□□□□ -1.49
PDE6A-202ENST00000508173 IMUPQ9GZP8 106 aa5.76□□□□□ -1.49
PDE6A-202ENST00000508173 FAM30AQ9NZY2 134 aa5.76□□□□□ -1.49
PDE6A-202ENST00000508173 SPACA4Q8TDM5 124 aa5.75□□□□□ -1.49
PDE6A-202ENST00000508173 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
PDE6A-202ENST00000508173 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
PDE6A-202ENST00000508173 MED13Q9UHV7 2174 aa5.75□□□□□ -1.49
PDE6A-202ENST00000508173 A0A087WYN8 130 aa5.75□□□□□ -1.49
PDE6A-202ENST00000508173 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
PDE6A-202ENST00000508173 NCOA6Q14686 2063 aaPredicted RBP5.75□□□□□ -1.49
PDE6A-202ENST00000508173 MRPS36P82909 103 aaKnown RBP5.74□□□□□ -1.49
PDE6A-202ENST00000508173 SMCPP49901 116 aaPredicted RBP5.74□□□□□ -1.49
PDE6A-202ENST00000508173 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
PDE6A-202ENST00000508173 CRYGAP11844 174 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 TRBV7-6A0A0J9YX20 115 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 IGIPA6NJ69 53 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 AVPP01185 164 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 ODF3L2Q3SX64 289 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 CPAMD8Q8IZJ3 1885 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 F8P00451 2351 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 TRBV27A0A0K0K1C4 114 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 RPL37AP61513 92 aaKnown RBP5.73□□□□□ -1.49
PDE6A-202ENST00000508173 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 Q8N6K4 173 aa5.73□□□□□ -1.49
PDE6A-202ENST00000508173 LYPD5Q6UWN5 251 aa5.72□□□□□ -1.49
PDE6A-202ENST00000508173 GOLGB1Q14789 3259 aaKnown RBP5.72□□□□□ -1.49
PDE6A-202ENST00000508173 DOPEY1Q5JWR5 2465 aa5.72□□□□□ -1.49
PDE6A-202ENST00000508173 Q6ZRP5 223 aa5.72□□□□□ -1.49
PDE6A-202ENST00000508173 MED12LQ86YW9 2145 aa5.72□□□□□ -1.49
PDE6A-202ENST00000508173 EML5Q05BV3 1969 aa5.72□□□□□ -1.49
PDE6A-202ENST00000508173 HCFC1P51610 2035 aa5.72□□□□□ -1.49
PDE6A-202ENST00000508173 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.49
PDE6A-202ENST00000508173 UNQ6190/PRO20217Q6UXQ8 127 aa5.71□□□□□ -1.49
PDE6A-202ENST00000508173 RTL8CO15255 209 aa5.71□□□□□ -1.5
PDE6A-202ENST00000508173 POLR2KP53803 58 aaKnown RBP5.71□□□□□ -1.5
PDE6A-202ENST00000508173 C9orf116Q5BN46 136 aaPredicted RBP5.71□□□□□ -1.5
PDE6A-202ENST00000508173 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
PDE6A-202ENST00000508173 KLLNB2CW77 178 aa5.7□□□□□ -1.5
PDE6A-202ENST00000508173 IGKV2-30P06310 120 aa5.7□□□□□ -1.5
PDE6A-202ENST00000508173 ANKRD11Q6UB99 2663 aaPredicted RBP5.7□□□□□ -1.5
PDE6A-202ENST00000508173 PRR3P79522 188 aaKnown RBP5.69□□□□□ -1.5
PDE6A-202ENST00000508173 LINC00336Q6ZUF6 198 aa5.69□□□□□ -1.5
PDE6A-202ENST00000508173 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
PDE6A-202ENST00000508173 TLN1Q9Y490 2541 aaKnown RBP5.69□□□□□ -1.5
PDE6A-202ENST00000508173 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
PDE6A-202ENST00000508173 CNFNQ9BYD5 112 aa5.69□□□□□ -1.5
PDE6A-202ENST00000508173 CELA1Q9UNI1 258 aa5.69□□□□□ -1.5
PDE6A-202ENST00000508173 FHL2Q14192 279 aa5.68□□□□□ -1.5
PDE6A-202ENST00000508173 PRO0461Q9UI25 63 aa5.68□□□□□ -1.5
PDE6A-202ENST00000508173 TRBV10-3A0A0K0K1G6 114 aa5.68□□□□□ -1.5
PDE6A-202ENST00000508173 NBDYA0A0U1RRE5 68 aa5.68□□□□□ -1.5
PDE6A-202ENST00000508173 RAI1Q7Z5J4 1906 aaPredicted RBP5.68□□□□□ -1.5
PDE6A-202ENST00000508173 PTPRBP23467 1997 aa5.67□□□□□ -1.5
PDE6A-202ENST00000508173 SBSPONQ8IVN8 264 aa5.67□□□□□ -1.5
PDE6A-202ENST00000508173 PSPHP1O15172 72 aa5.67□□□□□ -1.5
PDE6A-202ENST00000508173 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
PDE6A-202ENST00000508173 A0A087WSZ3 146 aa5.66□□□□□ -1.5
PDE6A-202ENST00000508173 LINC00575Q6W349 94 aa5.66□□□□□ -1.5
PDE6A-202ENST00000508173 PRLHP81277 87 aa5.65□□□□□ -1.5
PDE6A-202ENST00000508173 SMCR5Q8TEV8 140 aa5.65□□□□□ -1.5
PDE6A-202ENST00000508173 POLQO75417 2590 aa5.65□□□□□ -1.5
PDE6A-202ENST00000508173 LINC01547P58512 204 aaPredicted RBP5.65□□□□□ -1.5
PDE6A-202ENST00000508173 LINC00846Q9NV44 126 aa5.65□□□□□ -1.5
PDE6A-202ENST00000508173 KIF25-AS1Q9Y6Z4 181 aa5.65□□□□□ -1.5
PDE6A-202ENST00000508173 MYO9AB2RTY4 2548 aa5.65□□□□□ -1.51
PDE6A-202ENST00000508173 MOBPQ13875 183 aa5.65□□□□□ -1.51
PDE6A-202ENST00000508173 CEP295Q9C0D2 2601 aa5.65□□□□□ -1.51
PDE6A-202ENST00000508173 SORL1Q92673 2214 aa5.65□□□□□ -1.51
PDE6A-202ENST00000508173 KRTAP21-3Q3LHN1 58 aa5.65□□□□□ -1.51
PDE6A-202ENST00000508173 TRAV7A0A075B6U4 112 aa5.64□□□□□ -1.51
PDE6A-202ENST00000508173 Q6ZSN1 163 aa5.64□□□□□ -1.51
PDE6A-202ENST00000508173 TMEM254Q8TBM7 123 aa5.64□□□□□ -1.51
PDE6A-202ENST00000508173 C22orf24Q9Y442 160 aa5.64□□□□□ -1.51
PDE6A-202ENST00000508173 ACYP2P14621 99 aa5.64□□□□□ -1.51
PDE6A-202ENST00000508173 LINC00315P59091 139 aa5.64□□□□□ -1.51
PDE6A-202ENST00000508173 LINC00242Q5T6M2 205 aa5.64□□□□□ -1.51
PDE6A-202ENST00000508173 A0A1W2PPR1 153 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms