RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 NPSP0C0P6 89 aa9.39□□□□□ -0.91
SNF8-205ENST00000507302 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
SNF8-205ENST00000507302 C2orf66Q6UXQ4 117 aa9.39□□□□□ -0.91
SNF8-205ENST00000507302 RPL37AP8A6NKH3 93 aa9.38□□□□□ -0.91
SNF8-205ENST00000507302 F8W036 122 aa9.38□□□□□ -0.91
SNF8-205ENST00000507302 RAB5AP20339 215 aa9.38□□□□□ -0.91
SNF8-205ENST00000507302 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
SNF8-205ENST00000507302 C2orf88Q9BSF0 95 aa9.38□□□□□ -0.91
SNF8-205ENST00000507302 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
SNF8-205ENST00000507302 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
SNF8-205ENST00000507302 S100A8P05109 93 aa9.37□□□□□ -0.91
SNF8-205ENST00000507302 LINC01547P58512 204 aaPredicted RBP9.37□□□□□ -0.91
SNF8-205ENST00000507302 ZC2HC1BQ5TFG8 222 aa9.37□□□□□ -0.91
SNF8-205ENST00000507302 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
SNF8-205ENST00000507302 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
SNF8-205ENST00000507302 ORMDL3Q8N138 153 aa9.36□□□□□ -0.91
SNF8-205ENST00000507302 IGIPA6NJ69 53 aa9.35□□□□□ -0.91
SNF8-205ENST00000507302 CXCL5P42830 114 aa9.35□□□□□ -0.91
SNF8-205ENST00000507302 KRTAP13-3Q3SY46 172 aa9.35□□□□□ -0.91
SNF8-205ENST00000507302 FP248Q71RG6 208 aaPredicted RBP9.35□□□□□ -0.91
SNF8-205ENST00000507302 CDKN2A-AS1Q9UH64 79 aa9.35□□□□□ -0.91
SNF8-205ENST00000507302 UBE2AP49459 152 aa9.34□□□□□ -0.91
SNF8-205ENST00000507302 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
SNF8-205ENST00000507302 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
SNF8-205ENST00000507302 TMEM136Q6ZRR5 245 aa9.34□□□□□ -0.91
SNF8-205ENST00000507302 PRELID3AQ96N28 172 aa9.34□□□□□ -0.91
SNF8-205ENST00000507302 VCX2Q9H322 139 aa9.34□□□□□ -0.91
SNF8-205ENST00000507302 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
SNF8-205ENST00000507302 HERVK_113P63121 156 aa9.33□□□□□ -0.92
SNF8-205ENST00000507302 ADIRFQ15847 76 aa9.32□□□□□ -0.92
SNF8-205ENST00000507302 NAT8Q9UHE5 227 aa9.32□□□□□ -0.92
SNF8-205ENST00000507302 LAMTOR2Q9Y2Q5 125 aa9.32□□□□□ -0.92
SNF8-205ENST00000507302 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
SNF8-205ENST00000507302 SEC11AP67812 179 aa9.31□□□□□ -0.92
SNF8-205ENST00000507302 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
SNF8-205ENST00000507302 ATP5L2Q7Z4Y8 100 aa9.3□□□□□ -0.92
SNF8-205ENST00000507302 C3orf22Q8N5N4 141 aa9.3□□□□□ -0.92
SNF8-205ENST00000507302 Q8N8P6 123 aa9.3□□□□□ -0.92
SNF8-205ENST00000507302 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
SNF8-205ENST00000507302 SMIM1B2RUZ4 78 aa9.29□□□□□ -0.92
SNF8-205ENST00000507302 C9JQL5 133 aa9.29□□□□□ -0.92
SNF8-205ENST00000507302 K7EMI3 77 aa9.29□□□□□ -0.92
SNF8-205ENST00000507302 LCE2CQ5TA81 110 aa9.28□□□□□ -0.92
SNF8-205ENST00000507302 IGLV5-45A0A087WSX0 123 aa9.27□□□□□ -0.93
SNF8-205ENST00000507302 PRLHP81277 87 aa9.27□□□□□ -0.93
SNF8-205ENST00000507302 ORMDL2Q53FV1 153 aa9.27□□□□□ -0.93
SNF8-205ENST00000507302 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.93
SNF8-205ENST00000507302 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
SNF8-205ENST00000507302 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.93
SNF8-205ENST00000507302 IGKV2-28A0A075B6P5 120 aa9.26□□□□□ -0.93
SNF8-205ENST00000507302 LOC389332A0A1B0GUA5 103 aa9.26□□□□□ -0.93
SNF8-205ENST00000507302 IGKV2D-28P01615 120 aa9.26□□□□□ -0.93
SNF8-205ENST00000507302 LINC00337Q8N6G1 96 aa9.26□□□□□ -0.93
SNF8-205ENST00000507302 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
SNF8-205ENST00000507302 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
SNF8-205ENST00000507302 SCO1O75880 301 aa9.25□□□□□ -0.93
SNF8-205ENST00000507302 SRSF3P84103 164 aaKnown RBP9.25□□□□□ -0.93
SNF8-205ENST00000507302 PAPPA-AS1Q5QFB9 102 aa9.25□□□□□ -0.93
SNF8-205ENST00000507302 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
SNF8-205ENST00000507302 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
SNF8-205ENST00000507302 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
SNF8-205ENST00000507302 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
SNF8-205ENST00000507302 M0R378 163 aa9.23□□□□□ -0.93
SNF8-205ENST00000507302 VPREB1P12018 145 aa9.23□□□□□ -0.93
SNF8-205ENST00000507302 TINCRA0A1B0GVN0 87 aa9.22□□□□□ -0.93
SNF8-205ENST00000507302 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
SNF8-205ENST00000507302 KRTAP19-2Q3LHN2 52 aa9.22□□□□□ -0.93
SNF8-205ENST00000507302 FAM19A1Q7Z5A9 133 aa9.22□□□□□ -0.93
SNF8-205ENST00000507302 TOMM6Q96B49 74 aa9.21□□□□□ -0.94
SNF8-205ENST00000507302 RAB5BP61020 215 aa9.2□□□□□ -0.94
SNF8-205ENST00000507302 SPRR4Q96PI1 79 aa9.2□□□□□ -0.94
SNF8-205ENST00000507302 G0S2P27469 103 aa9.19□□□□□ -0.94
SNF8-205ENST00000507302 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
SNF8-205ENST00000507302 ERASQ7Z444 233 aa9.18□□□□□ -0.94
SNF8-205ENST00000507302 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
SNF8-205ENST00000507302 SPINK1P00995 79 aa9.16□□□□□ -0.94
SNF8-205ENST00000507302 PEA15Q15121 130 aa9.16□□□□□ -0.94
SNF8-205ENST00000507302 XP32Q5T750 250 aa9.16□□□□□ -0.94
SNF8-205ENST00000507302 Q8NDZ9 215 aa9.16□□□□□ -0.94
SNF8-205ENST00000507302 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
SNF8-205ENST00000507302 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
SNF8-205ENST00000507302 MT1HP80294 61 aa9.15□□□□□ -0.94
SNF8-205ENST00000507302 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
SNF8-205ENST00000507302 AKAP14Q86UN6 197 aa9.15□□□□□ -0.94
SNF8-205ENST00000507302 Q8NBF4 154 aa9.15□□□□□ -0.94
SNF8-205ENST00000507302 IGLV5-39A0A0G2JS06 123 aa9.14□□□□□ -0.95
SNF8-205ENST00000507302 ATP5LO75964 103 aa9.14□□□□□ -0.95
SNF8-205ENST00000507302 RPS29P62273 56 aaKnown RBP9.14□□□□□ -0.95
SNF8-205ENST00000507302 ADCYAP1P18509 176 aa9.13□□□□□ -0.95
SNF8-205ENST00000507302 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
SNF8-205ENST00000507302 COX17Q14061 63 aa9.13□□□□□ -0.95
SNF8-205ENST00000507302 HIGD2AQ9BW72 106 aa9.13□□□□□ -0.95
SNF8-205ENST00000507302 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
SNF8-205ENST00000507302 CST9LQ9H4G1 147 aa9.13□□□□□ -0.95
SNF8-205ENST00000507302 DAND5Q8N907 189 aa9.12□□□□□ -0.95
SNF8-205ENST00000507302 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
SNF8-205ENST00000507302 ZNF706Q9Y5V0 76 aaPredicted RBP9.12□□□□□ -0.95
SNF8-205ENST00000507302 LINC01546A6NGU7 62 aa9.11□□□□□ -0.95
SNF8-205ENST00000507302 PFN2P35080 140 aa9.11□□□□□ -0.95
SNF8-205ENST00000507302 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms