RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 CST9LQ9H4G1 147 aa10.06□□□□□ -0.8
SNX2-205ENST00000506874 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
SNX2-205ENST00000506874 F8WDY8 70 aa10.05□□□□□ -0.8
SNX2-205ENST00000506874 PTTG1IPP53801 180 aa10.05□□□□□ -0.8
SNX2-205ENST00000506874 KIAA0087Q14695 138 aa10.05□□□□□ -0.8
SNX2-205ENST00000506874 PMVKQ15126 192 aa10.05□□□□□ -0.8
SNX2-205ENST00000506874 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
SNX2-205ENST00000506874 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
SNX2-205ENST00000506874 LOC107984640A0A0U1RRK4 108 aa10.04□□□□□ -0.8
SNX2-205ENST00000506874 SCO1O75880 301 aa10.04□□□□□ -0.8
SNX2-205ENST00000506874 SRSF9Q13242 221 aaKnown RBP eCLIP10.04□□□□□ -0.8
SNX2-205ENST00000506874 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
SNX2-205ENST00000506874 CHCHD1Q96BP2 118 aaKnown RBP10.04□□□□□ -0.8
SNX2-205ENST00000506874 NDUFA1O15239 70 aa10.03□□□□□ -0.8
SNX2-205ENST00000506874 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
SNX2-205ENST00000506874 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
SNX2-205ENST00000506874 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
SNX2-205ENST00000506874 NDUFA6P56556 154 aa10.02□□□□□ -0.81
SNX2-205ENST00000506874 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
SNX2-205ENST00000506874 BAGE3Q86Y29 109 aa10.02□□□□□ -0.81
SNX2-205ENST00000506874 LINC00469Q8N7U9 141 aa10.02□□□□□ -0.81
SNX2-205ENST00000506874 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
SNX2-205ENST00000506874 ATP5LO75964 103 aa10.01□□□□□ -0.81
SNX2-205ENST00000506874 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
SNX2-205ENST00000506874 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
SNX2-205ENST00000506874 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
SNX2-205ENST00000506874 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
SNX2-205ENST00000506874 PRSS2P07478 247 aa10□□□□□ -0.81
SNX2-205ENST00000506874 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
SNX2-205ENST00000506874 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
SNX2-205ENST00000506874 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
SNX2-205ENST00000506874 HSBP1O75506 76 aa9.98□□□□□ -0.81
SNX2-205ENST00000506874 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
SNX2-205ENST00000506874 Q8IZM0 81 aa9.98□□□□□ -0.81
SNX2-205ENST00000506874 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
SNX2-205ENST00000506874 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
SNX2-205ENST00000506874 FAM19A2Q8N3H0 131 aa9.97□□□□□ -0.81
SNX2-205ENST00000506874 PSORS1C2Q9UIG4 136 aa9.97□□□□□ -0.81
SNX2-205ENST00000506874 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.82
SNX2-205ENST00000506874 SERF1AO75920 110 aa9.96□□□□□ -0.82
SNX2-205ENST00000506874 SPINK8P0C7L1 97 aa9.96□□□□□ -0.82
SNX2-205ENST00000506874 LINC00310P59036 64 aa9.96□□□□□ -0.82
SNX2-205ENST00000506874 CKS1BP61024 79 aa9.96□□□□□ -0.82
SNX2-205ENST00000506874 PHF5AQ7RTV0 110 aaKnown RBP9.96□□□□□ -0.82
SNX2-205ENST00000506874 TLX1NBP0CAT3 122 aa9.95□□□□□ -0.82
SNX2-205ENST00000506874 C1orf137Q5JT78 98 aa9.95□□□□□ -0.82
SNX2-205ENST00000506874 IFI27L1Q96BM0 104 aa9.95□□□□□ -0.82
SNX2-205ENST00000506874 H3BRM9 83 aa9.94□□□□□ -0.82
SNX2-205ENST00000506874 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
SNX2-205ENST00000506874 C11orf86A6NJI1 115 aa9.93□□□□□ -0.82
SNX2-205ENST00000506874 NUPR1O60356 82 aa9.93□□□□□ -0.82
SNX2-205ENST00000506874 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
SNX2-205ENST00000506874 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
SNX2-205ENST00000506874 CXCL5P42830 114 aa9.92□□□□□ -0.82
SNX2-205ENST00000506874 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
SNX2-205ENST00000506874 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
SNX2-205ENST00000506874 TRAV12-1A0A0B4J245 112 aa9.91□□□□□ -0.82
SNX2-205ENST00000506874 F8VRH5 84 aa9.91□□□□□ -0.82
SNX2-205ENST00000506874 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
SNX2-205ENST00000506874 IGLV5-39A0A0G2JS06 123 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BKO60814 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 LEPROTL1O95214 131 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BJP06899 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BOP23527 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BBP33778 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BDP58876 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BCP62807 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST2H2BEQ16778 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.89□□□□□ -0.83
SNX2-205ENST00000506874 TMEM170BQ5T4T1 132 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BHQ93079 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BNQ99877 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 HIST1H2BMQ99879 126 aa9.89□□□□□ -0.83
SNX2-205ENST00000506874 LPAP08519 4548 aa9.88□□□□□ -0.83
SNX2-205ENST00000506874 FAM168BA1KXE4 195 aa9.88□□□□□ -0.83
SNX2-205ENST00000506874 PRR26Q8N8Z3 221 aa9.88□□□□□ -0.83
SNX2-205ENST00000506874 H0Y8G0 127 aa9.87□□□□□ -0.83
SNX2-205ENST00000506874 IGLV7-43P04211 117 aa9.87□□□□□ -0.83
SNX2-205ENST00000506874 FABP4P15090 132 aa9.87□□□□□ -0.83
SNX2-205ENST00000506874 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
SNX2-205ENST00000506874 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
SNX2-205ENST00000506874 KRTAP11-1Q8IUC1 163 aa9.86□□□□□ -0.83
SNX2-205ENST00000506874 DIRC1Q969H9 104 aa9.86□□□□□ -0.83
SNX2-205ENST00000506874 HSPB8Q9UJY1 196 aa9.85□□□□□ -0.83
SNX2-205ENST00000506874 TMEM223A0PJW6 202 aa9.84□□□□□ -0.83
SNX2-205ENST00000506874 S100A1P23297 94 aa9.84□□□□□ -0.83
SNX2-205ENST00000506874 KRTAP7-1Q8IUC3 87 aa9.84□□□□□ -0.83
SNX2-205ENST00000506874 ATP6V1G1O75348 118 aa9.83□□□□□ -0.84
SNX2-205ENST00000506874 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
SNX2-205ENST00000506874 H0Y9J4 135 aa9.82□□□□□ -0.84
SNX2-205ENST00000506874 M0QXV9 152 aa9.8□□□□□ -0.84
SNX2-205ENST00000506874 UBE2BP63146 152 aa9.8□□□□□ -0.84
SNX2-205ENST00000506874 PFN2P35080 140 aa9.79□□□□□ -0.84
SNX2-205ENST00000506874 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
SNX2-205ENST00000506874 PMCHL2Q9BQD1 86 aa9.79□□□□□ -0.84
SNX2-205ENST00000506874 MAP1LC3CQ9BXW4 147 aa9.79□□□□□ -0.84
SNX2-205ENST00000506874 PLNP26678 52 aa9.78□□□□□ -0.84
SNX2-205ENST00000506874 ERG28Q9UKR5 140 aa9.78□□□□□ -0.84
SNX2-205ENST00000506874 DPM2O94777 84 aa9.77□□□□□ -0.85
SNX2-205ENST00000506874 IGLV1-50A0A075B6I6 118 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms