RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
USP46-206ENST00000506707 IFI27L1Q96BM0 104 aa3.67□□□□□ -1.82
USP46-206ENST00000506707 RYR1P21817 5038 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 HSPG2P98160 4391 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.66□□□□□ -1.82
USP46-206ENST00000506707 PANO1I0J062 215 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 LEPROTL1O95214 131 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 IGLC3P0DOY3 106 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 NDUFA6P56556 154 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 SPAG11BQ08648 103 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 SYCNQ0VAF6 134 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 COA6Q5JTJ3 125 aaKnown RBP3.66□□□□□ -1.82
USP46-206ENST00000506707 OR10D4PQ8NGN7 298 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 ORAOV1Q8WV07 137 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 C2orf48Q96LS8 159 aa3.66□□□□□ -1.82
USP46-206ENST00000506707 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
USP46-206ENST00000506707 TRAV12-1A0A0B4J245 112 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 SMIM1B2RUZ4 78 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 F8WDY8 70 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 FABP4P15090 132 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 HAMPP81172 84 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 C10orf25Q5T742 122 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 UNQ6190/PRO20217Q6UXQ8 127 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 Q6ZRU5 148 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 LINC00469Q8N7U9 141 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 CARD19Q96LW7 228 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 CAMK2N2Q96S95 79 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 HERC2O95714 4834 aa3.65□□□□□ -1.83
USP46-206ENST00000506707 C11orf86A6NJI1 115 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 PLA2G1BP04054 148 aaKnown RBP3.64□□□□□ -1.83
USP46-206ENST00000506707 SPINK8P0C7L1 97 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 ZNF22P17026 224 aaPredicted RBP3.64□□□□□ -1.83
USP46-206ENST00000506707 CIRBPQ14011 172 aaKnown RBP3.64□□□□□ -1.83
USP46-206ENST00000506707 ODF1Q14990 250 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 RNF151Q2KHN1 245 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 C6orf226Q5I0X4 101 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 C2orf82Q6UX34 121 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 Q8IZM0 81 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 CIRBP-AS1Q8TBR5 109 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 CHAC1Q9BUX1 264 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 MRPL35Q9NZE8 188 aaKnown RBP3.64□□□□□ -1.83
USP46-206ENST00000506707 HSPB8Q9UJY1 196 aa3.64□□□□□ -1.83
USP46-206ENST00000506707 CHTOPQ9Y3Y2 248 aaKnown RBP3.64□□□□□ -1.83
USP46-206ENST00000506707 IGLV5-39A0A0G2JS06 123 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 F8VRH5 84 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 H3BRM9 83 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 NDUFA1O15239 70 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 SMR3BP02814 79 aaPredicted RBP3.63□□□□□ -1.83
USP46-206ENST00000506707 CHTF8P0CG12 524 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 SCXQ7RTU7 201 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 PACRGQ96M98 296 aaPredicted RBP3.63□□□□□ -1.83
USP46-206ENST00000506707 TOMM7Q9P0U1 55 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 C6orf48Q9UBA6 75 aa3.63□□□□□ -1.83
USP46-206ENST00000506707 FAT1Q14517 4588 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 A0A087WYN8 130 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 A0A096LNI7 61 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 TMEM223A0PJW6 202 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 H0Y8G0 127 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 PRSS2P07478 247 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 TLX1NBP0CAT3 122 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 CKS1BP61024 79 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 C9orf116Q5BN46 136 aaPredicted RBP3.62□□□□□ -1.83
USP46-206ENST00000506707 TMEM170BQ5T4T1 132 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 SPACA4Q8TDM5 124 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 MAP1LC3CQ9BXW4 147 aa3.62□□□□□ -1.83
USP46-206ENST00000506707 IGKV2-24A0A0C4DH68 120 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 EPM2AB3EWF7 344 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 SYS1-DBNDD2H3BUS1 97 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 C3orf79P0CE67 100 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 PTTG1IPP53801 180 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 GAGE2BQ13066 116 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 MAJINQ3KP22 176 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 Q6ZRP5 223 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 DPH3Q96FX2 82 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 PMCHL2Q9BQD1 86 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 PLAC8Q9NZF1 115 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 LINC00474Q9P2X8 69 aa3.61□□□□□ -1.83
USP46-206ENST00000506707 A0A1W2PNN7 141 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 NDUFC2-KCTD14E9PQ53 114 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 DPM2O94777 84 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 IGKCP01834 107 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 PLNP26678 52 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 CXCL5P42830 114 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 LINC01545Q5VT33 79 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 PET117Q6UWS5 81 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 STPG4Q8N801 248 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 ZNF625Q96I27 306 aaPredicted RBP3.6□□□□□ -1.83
USP46-206ENST00000506707 PLA2G2DQ9UNK4 145 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 PKIGQ9Y2B9 76 aa3.6□□□□□ -1.83
USP46-206ENST00000506707 C5orf52A6NGY3 159 aa3.59□□□□□ -1.83
USP46-206ENST00000506707 RPL18AQ02543 176 aaKnown RBP3.59□□□□□ -1.83
USP46-206ENST00000506707 GAGE2EQ4V326 116 aa3.59□□□□□ -1.83
USP46-206ENST00000506707 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
USP46-206ENST00000506707 HIST1H2BLQ99880 126 aa3.59□□□□□ -1.83
USP46-206ENST00000506707 GAGE2DQ9UEU5 116 aa3.59□□□□□ -1.83
USP46-206ENST00000506707 S100A6P06703 90 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms