RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 LINC00173Q6ZV60 143 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 SCXQ7RTU7 201 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 BAGE3Q86Y29 109 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 CIRBP-AS1Q8TBR5 109 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 URB1-AS1Q96HZ7 61 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 PACRGQ96M98 296 aaPredicted RBP4.66□□□□□ -1.66
GYPB-206ENST00000506516 CST9LQ9H4G1 147 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 LINC00474Q9P2X8 69 aa4.66□□□□□ -1.66
GYPB-206ENST00000506516 FAT1Q14517 4588 aa4.65□□□□□ -1.66
GYPB-206ENST00000506516 TINCRA0A1B0GVN0 87 aa4.65□□□□□ -1.67
GYPB-206ENST00000506516 NDUFA1O15239 70 aa4.65□□□□□ -1.67
GYPB-206ENST00000506516 ATP5LO75964 103 aa4.65□□□□□ -1.67
GYPB-206ENST00000506516 PRSS2P07478 247 aa4.65□□□□□ -1.67
GYPB-206ENST00000506516 NDUFA6P56556 154 aa4.65□□□□□ -1.67
GYPB-206ENST00000506516 A0A096LNJ9 63 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 IGKV2-24A0A0C4DH68 120 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 A0A0J9YXV3 536 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 LOC107984640A0A0U1RRK4 108 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 HSBP1O75506 76 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 PMCHL1Q16048 86 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 MAJINQ3KP22 176 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 C6orf226Q5I0X4 101 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 Q5VSD8 79 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 Q6ZRU5 148 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 MRPL35Q9NZE8 188 aaKnown RBP4.64□□□□□ -1.67
GYPB-206ENST00000506516 CDKN2A-AS1Q9UH64 79 aa4.64□□□□□ -1.67
GYPB-206ENST00000506516 H3BRM9 83 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 PANO1I0J062 215 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 CKS1BP61024 79 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 GAGE2BQ13066 116 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 CIRBPQ14011 172 aaKnown RBP4.63□□□□□ -1.67
GYPB-206ENST00000506516 PDZD11Q5EBL8 140 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 LINC00469Q8N7U9 141 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 SPACA4Q8TDM5 124 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 TOMM7Q9P0U1 55 aa4.63□□□□□ -1.67
GYPB-206ENST00000506516 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 A0A087WYN8 130 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 CHTF8P0CG12 524 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 KIAA0087Q14695 138 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 UNQ6190/PRO20217Q6UXQ8 127 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 Q8IZM0 81 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 STPG4Q8N801 248 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
GYPB-206ENST00000506516 A0A096LNI7 61 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 TRBV30A0A0K0K1B3 111 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 SCO1O75880 301 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 INAFM2P0DMQ5 153 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 IGLC3P0DOY3 106 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 S100A1P23297 94 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 RPL18AQ02543 176 aaKnown RBP4.61□□□□□ -1.67
GYPB-206ENST00000506516 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 PLAC8Q9NZF1 115 aa4.61□□□□□ -1.67
GYPB-206ENST00000506516 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
GYPB-206ENST00000506516 IGLV5-45A0A087WSX0 123 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 TRAV12-1A0A0B4J245 112 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 F8VRH5 84 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 SERF1AO75920 110 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 LEPROTL1O95214 131 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 TLX1NBP0CAT3 122 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 CXCL5P42830 114 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 C2orf82Q6UX34 121 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 FAM19A2Q8N3H0 131 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 C7orf33Q8WU49 177 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 C6orf48Q9UBA6 75 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 HSPB8Q9UJY1 196 aa4.6□□□□□ -1.67
GYPB-206ENST00000506516 SMIM1B2RUZ4 78 aa4.59□□□□□ -1.67
GYPB-206ENST00000506516 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.67
GYPB-206ENST00000506516 SPINK8P0C7L1 97 aa4.59□□□□□ -1.67
GYPB-206ENST00000506516 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.67
GYPB-206ENST00000506516 TMEM170BQ5T4T1 132 aa4.59□□□□□ -1.67
GYPB-206ENST00000506516 COX7B2Q8TF08 81 aa4.59□□□□□ -1.67
GYPB-206ENST00000506516 ZNF22P17026 224 aaPredicted RBP4.58□□□□□ -1.68
GYPB-206ENST00000506516 GAGE2EQ4V326 116 aa4.58□□□□□ -1.68
GYPB-206ENST00000506516 Q6ZRP5 223 aa4.58□□□□□ -1.68
GYPB-206ENST00000506516 GAGE2DQ9UEU5 116 aa4.58□□□□□ -1.68
GYPB-206ENST00000506516 VPS13BQ7Z7G8 4022 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 A0A1W2PNN7 141 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 C11orf86A6NJI1 115 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 H0Y8G0 127 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 NUPR1O60356 82 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BKO60814 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BJP06899 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 FABP4P15090 132 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BOP23527 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BBP33778 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BDP58876 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BCP62807 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST2H2BEQ16778 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 C9orf116Q5BN46 136 aaPredicted RBP4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.57□□□□□ -1.68
GYPB-206ENST00000506516 SFTA2Q6UW10 78 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BHQ93079 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BNQ99877 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 HIST1H2BMQ99879 126 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 MAP1LC3CQ9BXW4 147 aa4.57□□□□□ -1.68
GYPB-206ENST00000506516 IGLV5-39A0A0G2JS06 123 aa4.56□□□□□ -1.68
GYPB-206ENST00000506516 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
GYPB-206ENST00000506516 ATP6V1G1O75348 118 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms