RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SCO1O75880 301 aa11.18□□□□□ -0.62
SMN1-204ENST00000506163 RPL18AQ02543 176 aaKnown RBP11.18□□□□□ -0.62
SMN1-204ENST00000506163 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
SMN1-204ENST00000506163 Q6ZRP5 223 aa11.18□□□□□ -0.62
SMN1-204ENST00000506163 TOMM7Q9P0U1 55 aa11.18□□□□□ -0.62
SMN1-204ENST00000506163 PKIGQ9Y2B9 76 aa11.18□□□□□ -0.62
SMN1-204ENST00000506163 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
SMN1-204ENST00000506163 Q8IZM0 81 aa11.17□□□□□ -0.62
SMN1-204ENST00000506163 TLX1NBP0CAT3 122 aa11.16□□□□□ -0.62
SMN1-204ENST00000506163 NDUFA6P56556 154 aa11.16□□□□□ -0.62
SMN1-204ENST00000506163 LINC00310P59036 64 aa11.16□□□□□ -0.62
SMN1-204ENST00000506163 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
SMN1-204ENST00000506163 LRP1Q07954 4544 aaKnown RBP11.15□□□□□ -0.62
SMN1-204ENST00000506163 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
SMN1-204ENST00000506163 SPINK8P0C7L1 97 aa11.14□□□□□ -0.63
SMN1-204ENST00000506163 IGLC3P0DOY3 106 aa11.14□□□□□ -0.63
SMN1-204ENST00000506163 C6orf226Q5I0X4 101 aa11.14□□□□□ -0.63
SMN1-204ENST00000506163 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
SMN1-204ENST00000506163 TMEM238LA0A1B0GVL6 79 aa11.13□□□□□ -0.63
SMN1-204ENST00000506163 ATP5LO75964 103 aa11.13□□□□□ -0.63
SMN1-204ENST00000506163 PRSS2P07478 247 aa11.13□□□□□ -0.63
SMN1-204ENST00000506163 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
SMN1-204ENST00000506163 FAM168BA1KXE4 195 aa11.12□□□□□ -0.63
SMN1-204ENST00000506163 NUPR1O60356 82 aa11.12□□□□□ -0.63
SMN1-204ENST00000506163 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
SMN1-204ENST00000506163 BAGE3Q86Y29 109 aa11.12□□□□□ -0.63
SMN1-204ENST00000506163 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
SMN1-204ENST00000506163 ZNF22P17026 224 aaPredicted RBP11.11□□□□□ -0.63
SMN1-204ENST00000506163 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
SMN1-204ENST00000506163 FAT3Q8TDW7 4589 aa11.11□□□□□ -0.63
SMN1-204ENST00000506163 CKS1BP61024 79 aa11.1□□□□□ -0.63
SMN1-204ENST00000506163 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
SMN1-204ENST00000506163 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
SMN1-204ENST00000506163 NDUFC2-KCTD14E9PQ53 114 aa11.09□□□□□ -0.63
SMN1-204ENST00000506163 SERF1AO75920 110 aa11.09□□□□□ -0.63
SMN1-204ENST00000506163 COX7B2Q8TF08 81 aa11.09□□□□□ -0.63
SMN1-204ENST00000506163 C7orf33Q8WU49 177 aa11.09□□□□□ -0.63
SMN1-204ENST00000506163 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
SMN1-204ENST00000506163 IFI27L1Q96BM0 104 aa11.09□□□□□ -0.63
SMN1-204ENST00000506163 HERC1Q15751 4861 aa11.09□□□□□ -0.63
SMN1-204ENST00000506163 IGLV5-39A0A0G2JS06 123 aa11.08□□□□□ -0.64
SMN1-204ENST00000506163 F8VRH5 84 aa11.08□□□□□ -0.64
SMN1-204ENST00000506163 PRR3P79522 188 aaKnown RBP11.08□□□□□ -0.64
SMN1-204ENST00000506163 PHF5AQ7RTV0 110 aaKnown RBP11.08□□□□□ -0.64
SMN1-204ENST00000506163 HSBP1O75506 76 aa11.07□□□□□ -0.64
SMN1-204ENST00000506163 H3BRM9 83 aa11.06□□□□□ -0.64
SMN1-204ENST00000506163 KRTAP11-1Q8IUC1 163 aa11.06□□□□□ -0.64
SMN1-204ENST00000506163 CHTOPQ9Y3Y2 248 aaKnown RBP11.06□□□□□ -0.64
SMN1-204ENST00000506163 TRAV12-1A0A0B4J245 112 aa11.05□□□□□ -0.64
SMN1-204ENST00000506163 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
SMN1-204ENST00000506163 CXCL5P42830 114 aa11.05□□□□□ -0.64
SMN1-204ENST00000506163 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
SMN1-204ENST00000506163 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.64
SMN1-204ENST00000506163 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.64
SMN1-204ENST00000506163 A6NJY4 79 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BKO60814 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BJP06899 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BOP23527 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BBP33778 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BDP58876 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BCP62807 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST2H2BEQ16778 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.01□□□□□ -0.65
SMN1-204ENST00000506163 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BHQ93079 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BNQ99877 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 HIST1H2BMQ99879 126 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 PSORS1C2Q9UIG4 136 aa11.01□□□□□ -0.65
SMN1-204ENST00000506163 LEPROTL1O95214 131 aa11□□□□□ -0.65
SMN1-204ENST00000506163 ODF1Q14990 250 aa11□□□□□ -0.65
SMN1-204ENST00000506163 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
SMN1-204ENST00000506163 FABP4P15090 132 aa10.99□□□□□ -0.65
SMN1-204ENST00000506163 SRSF9Q13242 221 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMN1-204ENST00000506163 H0Y8G0 127 aa10.98□□□□□ -0.65
SMN1-204ENST00000506163 J3QL48 77 aa10.97□□□□□ -0.65
SMN1-204ENST00000506163 OXTP01178 125 aa10.97□□□□□ -0.65
SMN1-204ENST00000506163 M0QXV9 152 aa10.96□□□□□ -0.65
SMN1-204ENST00000506163 ZNF625Q96I27 306 aaPredicted RBP10.95□□□□□ -0.66
SMN1-204ENST00000506163 HSPB8Q9UJY1 196 aa10.94□□□□□ -0.66
SMN1-204ENST00000506163 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
SMN1-204ENST00000506163 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
SMN1-204ENST00000506163 PFN2P35080 140 aa10.93□□□□□ -0.66
SMN1-204ENST00000506163 C1orf137Q5JT78 98 aa10.93□□□□□ -0.66
SMN1-204ENST00000506163 PMCHL2Q9BQD1 86 aa10.93□□□□□ -0.66
SMN1-204ENST00000506163 ERG28Q9UKR5 140 aa10.92□□□□□ -0.66
SMN1-204ENST00000506163 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
SMN1-204ENST00000506163 TNXBP22105 4242 aa10.91□□□□□ -0.66
SMN1-204ENST00000506163 UBE2BP63146 152 aa10.89□□□□□ -0.67
SMN1-204ENST00000506163 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
SMN1-204ENST00000506163 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
SMN1-204ENST00000506163 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
SMN1-204ENST00000506163 TSPEAR-AS2P59090 65 aa10.88□□□□□ -0.67
SMN1-204ENST00000506163 Q8NDZ9 215 aa10.88□□□□□ -0.67
SMN1-204ENST00000506163 ATP6V1G1O75348 118 aa10.87□□□□□ -0.67
SMN1-204ENST00000506163 COX17Q14061 63 aa10.87□□□□□ -0.67
SMN1-204ENST00000506163 COA6Q5JTJ3 125 aaKnown RBP10.87□□□□□ -0.67
SMN1-204ENST00000506163 TP73-AS1Q9UF72 201 aa10.87□□□□□ -0.67
SMN1-204ENST00000506163 IGLV5-37A0A075B6J1 123 aa10.86□□□□□ -0.67
SMN1-204ENST00000506163 DPM2O94777 84 aa10.86□□□□□ -0.67
SMN1-204ENST00000506163 PLNP26678 52 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms