RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 PSME4Q14997 1843 aa-1.47□□□□□ -2.65
SMN2-205ENST00000505346 DMDP11532 3685 aa-1.47□□□□□ -2.65
SMN2-205ENST00000505346 NSD3Q9BZ95 1437 aa-1.48□□□□□ -2.65
SMN2-205ENST00000505346 RANBP2P49792 3224 aaKnown RBP-1.48□□□□□ -2.65
SMN2-205ENST00000505346 DCHS1Q96JQ0 3298 aa-1.48□□□□□ -2.65
SMN2-205ENST00000505346 GUCA1AP43080 201 aaPredicted RBP-1.48□□□□□ -2.65
SMN2-205ENST00000505346 TAC4Q86UU9 113 aa-1.48□□□□□ -2.65
SMN2-205ENST00000505346 KCNRGQ8N5I3 272 aa-1.48□□□□□ -2.65
SMN2-205ENST00000505346 LINC00846Q9NV44 126 aa-1.48□□□□□ -2.65
SMN2-205ENST00000505346 S4R3F8 94 aa-1.48□□□□□ -2.65
SMN2-205ENST00000505346 POLA1P09884 1462 aaPredicted RBP-1.49□□□□□ -2.65
SMN2-205ENST00000505346 TULP4Q9NRJ4 1543 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 IGLC7A0M8Q6 106 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 H0YGG7 62 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 SCGB1A1P11684 91 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 ASIPP42127 132 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 TSTD1Q8NFU3 115 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 GSKIPQ9P0R6 139 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 ANKRD50Q9ULJ7 1429 aa-1.49□□□□□ -2.65
SMN2-205ENST00000505346 SPTBN5Q9NRC6 3674 aaKnown RBP-1.5□□□□□ -2.65
SMN2-205ENST00000505346 KIAA0556O60303 1618 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 APOC3P02656 99 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 TSLPQ969D9 159 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 APLNQ9ULZ1 77 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 LINC01558Q9Y6Z2 57 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.5□□□□□ -2.65
SMN2-205ENST00000505346 CEP350Q5VT06 3117 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 DNAH8Q96JB1 4490 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 HMGXB3Q12766 1538 aa-1.5□□□□□ -2.65
SMN2-205ENST00000505346 ARPC5O15511 151 aa-1.51□□□□□ -2.65
SMN2-205ENST00000505346 HIST1H1DP16402 221 aaKnown RBP-1.51□□□□□ -2.65
SMN2-205ENST00000505346 DEFB110Q30KQ9 67 aa-1.51□□□□□ -2.65
SMN2-205ENST00000505346 H1FX-AS1Q4G0G2 97 aa-1.51□□□□□ -2.65
SMN2-205ENST00000505346 Q8N8P6 123 aa-1.51□□□□□ -2.65
SMN2-205ENST00000505346 TPT1P8Q9HAU6 139 aa-1.51□□□□□ -2.65
SMN2-205ENST00000505346 FMN2Q9NZ56 1722 aa-1.52□□□□□ -2.65
SMN2-205ENST00000505346 LINC00959A0A1B0GUT2 108 aa-1.52□□□□□ -2.65
SMN2-205ENST00000505346 IFNGP01579 166 aa-1.52□□□□□ -2.65
SMN2-205ENST00000505346 TPPP2P59282 170 aa-1.52□□□□□ -2.65
SMN2-205ENST00000505346 DPH3Q96FX2 82 aa-1.52□□□□□ -2.65
SMN2-205ENST00000505346 MYOM3Q5VTT5 1437 aa-1.52□□□□□ -2.65
SMN2-205ENST00000505346 RAPGEF6Q8TEU7 1601 aa-1.52□□□□□ -2.65
SMN2-205ENST00000505346 C9orf92A6NGG3 77 aa-1.53□□□□□ -2.65
SMN2-205ENST00000505346 SYS1-DBNDD2H3BUS1 97 aa-1.53□□□□□ -2.65
SMN2-205ENST00000505346 COX8AP10176 69 aa-1.53□□□□□ -2.65
SMN2-205ENST00000505346 COPZ1P61923 177 aa-1.53□□□□□ -2.65
SMN2-205ENST00000505346 RPS25P62851 125 aaKnown RBP-1.53□□□□□ -2.65
SMN2-205ENST00000505346 LSM10Q969L4 123 aaKnown RBP-1.53□□□□□ -2.65
SMN2-205ENST00000505346 DYNLRB1Q9NP97 96 aa-1.53□□□□□ -2.65
SMN2-205ENST00000505346 SHANK2Q9UPX8 1470 aa-1.54□□□□□ -2.66
SMN2-205ENST00000505346 ANKRD30AQ9BXX3 1397 aa-1.54□□□□□ -2.66
SMN2-205ENST00000505346 TRBV7-4A0A0J9YYF1 115 aa-1.54□□□□□ -2.66
SMN2-205ENST00000505346 CPSF4LA6NMK7 179 aaKnown RBP-1.54□□□□□ -2.66
SMN2-205ENST00000505346 HMGN4O00479 90 aa-1.54□□□□□ -2.66
SMN2-205ENST00000505346 MGST2Q99735 147 aa-1.54□□□□□ -2.66
SMN2-205ENST00000505346 WDFY4Q6ZS81 3184 aa-1.54□□□□□ -2.66
SMN2-205ENST00000505346 CRYBG3Q68DQ2 2970 aa-1.55□□□□□ -2.66
SMN2-205ENST00000505346 TRBV7-3A0A075B6L6 115 aa-1.55□□□□□ -2.66
SMN2-205ENST00000505346 DEFB4AO15263 64 aa-1.55□□□□□ -2.66
SMN2-205ENST00000505346 WFDC9Q8NEX5 89 aa-1.55□□□□□ -2.66
SMN2-205ENST00000505346 PDCD10Q9BUL8 212 aa-1.55□□□□□ -2.66
SMN2-205ENST00000505346 SFT2D2O95562 160 aa-1.56□□□□□ -2.66
SMN2-205ENST00000505346 SMCO1Q147U7 214 aa-1.56□□□□□ -2.66
SMN2-205ENST00000505346 C10orf113Q5VZT2 155 aa-1.56□□□□□ -2.66
SMN2-205ENST00000505346 TMEM191AQ9H0A3 160 aa-1.56□□□□□ -2.66
SMN2-205ENST00000505346 ADAMTS12P58397 1594 aa-1.56□□□□□ -2.66
SMN2-205ENST00000505346 ARHGEF5Q12774 1597 aa-1.56□□□□□ -2.66
SMN2-205ENST00000505346 MGAQ8IWI9 3026 aa-1.56□□□□□ -2.66
SMN2-205ENST00000505346 EP400Q96L91 3159 aa-1.57□□□□□ -2.66
SMN2-205ENST00000505346 MYH7P12883 1935 aa-1.57□□□□□ -2.66
SMN2-205ENST00000505346 SSSCA1O60232 199 aa-1.57□□□□□ -2.66
SMN2-205ENST00000505346 TCEAL4Q96EI5 215 aa-1.57□□□□□ -2.66
SMN2-205ENST00000505346 SLIT1O75093 1534 aa-1.57□□□□□ -2.66
SMN2-205ENST00000505346 PAPPA2Q9BXP8 1791 aa-1.57□□□□□ -2.66
SMN2-205ENST00000505346 CEP152O94986 1710 aa-1.57□□□□□ -2.66
SMN2-205ENST00000505346 MYOM1P52179 1685 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 PTPN23Q9H3S7 1636 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 CFAP54Q96N23 3096 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 PIGBOS1A0A0B4J2F0 54 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 B2MP61769 119 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 TMEM263Q8WUH6 116 aaKnown RBP-1.58□□□□□ -2.66
SMN2-205ENST00000505346 LZICQ8WZA0 190 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 USMG5Q96IX5 58 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 NAA60Q9H7X0 242 aa-1.58□□□□□ -2.66
SMN2-205ENST00000505346 MAGI1Q96QZ7 1491 aaPredicted RBP-1.58□□□□□ -2.66
SMN2-205ENST00000505346 TCHHQ07283 1943 aa-1.59□□□□□ -2.66
SMN2-205ENST00000505346 A0A087WVE0 104 aa-1.59□□□□□ -2.66
SMN2-205ENST00000505346 C12orf73Q69YU5 71 aa-1.59□□□□□ -2.66
SMN2-205ENST00000505346 COPZ2Q9P299 210 aa-1.59□□□□□ -2.66
SMN2-205ENST00000505346 CFTRP13569 1480 aa-1.59□□□□□ -2.66
SMN2-205ENST00000505346 GRIN2AQ12879 1464 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 MGPP08493 103 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 SMIM21Q3B7S5 101 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 CLPSL2Q6UWE3 100 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 FDCSPQ8NFU4 85 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 PYDC1Q8WXC3 89 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 LINC01600Q96MT4 127 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 SPRR4Q96PI1 79 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 CCDC167Q9P0B6 97 aa-1.6□□□□□ -2.67
SMN2-205ENST00000505346 SETBP1Q9Y6X0 1596 aa-1.6□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms