RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 NCOA2Q15596 1464 aa1.3□□□□□ -2.2
TRAPPC13-206ENST00000504751 IQSEC2Q5JU85 1478 aa1.3□□□□□ -2.2
TRAPPC13-206ENST00000504751 CFAP74Q9C0B2 1584 aa1.3□□□□□ -2.2
TRAPPC13-206ENST00000504751 ASXL3Q9C0F0 2248 aa1.3□□□□□ -2.2
TRAPPC13-206ENST00000504751 PAPPA2Q9BXP8 1791 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 HMGN3Q15651 99 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 DEFB121Q5J5C9 76 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 LINC00575Q6W349 94 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 HEPN1Q6WQI6 88 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 C6orf201Q7Z4U5 140 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 KCPQ6ZWJ8 1503 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 MADDQ8WXG6 1647 aa1.29□□□□□ -2.2
TRAPPC13-206ENST00000504751 CEBPZOSA8MTT3 80 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 SMIM13P0DJ93 91 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 RPL37P61927 97 aaKnown RBP1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 PLGLAQ15195 96 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 C10orf113Q5VZT2 155 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 SMIM11BQ8TCY0 68 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 SMIM4Q8WVI0 70 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 LINC00846Q9NV44 126 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 RAPGEF6Q8TEU7 1601 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 PTPN23Q9H3S7 1636 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 ZNF831Q5JPB2 1677 aa1.28□□□□□ -2.2
TRAPPC13-206ENST00000504751 ITSN1Q15811 1721 aa1.27□□□□□ -2.21
TRAPPC13-206ENST00000504751 SHPRHQ149N8 1683 aa1.27□□□□□ -2.21
TRAPPC13-206ENST00000504751 ABCC2Q92887 1545 aa1.27□□□□□ -2.21
TRAPPC13-206ENST00000504751 SPATA8Q6RVD6 105 aa1.27□□□□□ -2.21
TRAPPC13-206ENST00000504751 TMEM263Q8WUH6 116 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-206ENST00000504751 CNTRLQ7Z7A1 2325 aa1.26□□□□□ -2.21
TRAPPC13-206ENST00000504751 UBE2D4Q9Y2X8 147 aa1.26□□□□□ -2.21
TRAPPC13-206ENST00000504751 RGPD1P0DJD0 1748 aa1.26□□□□□ -2.21
TRAPPC13-206ENST00000504751 ABCC1P33527 1531 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 C1orf167Q5SNV9 1468 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 HAMPP81172 84 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 COX17Q14061 63 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 SPINK13Q1W4C9 94 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 Q6JHZ5 121 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 C5P01031 1676 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 TARBP1Q13395 1621 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 MROH1Q8NDA8 1641 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 CUX1P39880 1505 aa1.25□□□□□ -2.21
TRAPPC13-206ENST00000504751 LRRC37A2A6NM11 1700 aa1.24□□□□□ -2.21
TRAPPC13-206ENST00000504751 H0Y9P7 68 aa1.24□□□□□ -2.21
TRAPPC13-206ENST00000504751 GCHFRP30047 84 aa1.24□□□□□ -2.21
TRAPPC13-206ENST00000504751 S100A3P33764 101 aa1.24□□□□□ -2.21
TRAPPC13-206ENST00000504751 UBR3Q6ZT12 1888 aa1.24□□□□□ -2.21
TRAPPC13-206ENST00000504751 K7EIL1 84 aa1.23□□□□□ -2.21
TRAPPC13-206ENST00000504751 PKD1L3Q7Z443 1732 aa1.23□□□□□ -2.21
TRAPPC13-206ENST00000504751 LAMC1P11047 1609 aa1.22□□□□□ -2.21
TRAPPC13-206ENST00000504751 CEP170BQ9Y4F5 1589 aaPredicted RBP1.22□□□□□ -2.21
TRAPPC13-206ENST00000504751 MAGI3Q5TCQ9 1506 aa1.22□□□□□ -2.21
TRAPPC13-206ENST00000504751 TRBV7-4A0A0J9YYF1 115 aa1.22□□□□□ -2.21
TRAPPC13-206ENST00000504751 UMAD1C9J7I0 102 aa1.22□□□□□ -2.21
TRAPPC13-206ENST00000504751 GNGT1P63211 74 aa1.22□□□□□ -2.21
TRAPPC13-206ENST00000504751 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
TRAPPC13-206ENST00000504751 DUOX2Q9NRD8 1548 aa1.21□□□□□ -2.22
TRAPPC13-206ENST00000504751 ROS1P08922 2347 aa1.21□□□□□ -2.22
TRAPPC13-206ENST00000504751 LRRC9Q6ZRR7 1453 aa1.21□□□□□ -2.22
TRAPPC13-206ENST00000504751 LRP6O75581 1613 aa1.21□□□□□ -2.22
TRAPPC13-206ENST00000504751 ALKQ9UM73 1620 aa1.21□□□□□ -2.22
TRAPPC13-206ENST00000504751 ATP7BP35670 1465 aa1.2□□□□□ -2.22
TRAPPC13-206ENST00000504751 PIK3C2BO00750 1634 aa1.2□□□□□ -2.22
TRAPPC13-206ENST00000504751 LINC00959A0A1B0GUT2 108 aa1.2□□□□□ -2.22
TRAPPC13-206ENST00000504751 HILPDAQ9Y5L2 63 aa1.2□□□□□ -2.22
TRAPPC13-206ENST00000504751 AHCTF1Q8WYP5 2266 aa1.19□□□□□ -2.22
TRAPPC13-206ENST00000504751 IFI6P09912 130 aa1.19□□□□□ -2.22
TRAPPC13-206ENST00000504751 SSBP3-AS1Q7Z2R9 100 aa1.19□□□□□ -2.22
TRAPPC13-206ENST00000504751 XRN1Q8IZH2 1706 aaKnown RBP1.19□□□□□ -2.22
TRAPPC13-206ENST00000504751 INO80Q9ULG1 1556 aaPredicted RBP1.19□□□□□ -2.22
TRAPPC13-206ENST00000504751 SLIT1O75093 1534 aa1.19□□□□□ -2.22
TRAPPC13-206ENST00000504751 TIAM2Q8IVF5 1701 aa1.18□□□□□ -2.22
TRAPPC13-206ENST00000504751 A0A087WXM4 84 aa1.18□□□□□ -2.22
TRAPPC13-206ENST00000504751 TRAV21A0A0B4J279 112 aa1.18□□□□□ -2.22
TRAPPC13-206ENST00000504751 A0A1B0GU69 56 aa1.18□□□□□ -2.22
TRAPPC13-206ENST00000504751 A0A1B0GUT8 65 aa1.18□□□□□ -2.22
TRAPPC13-206ENST00000504751 ASXL1Q8IXJ9 1541 aa1.18□□□□□ -2.22
TRAPPC13-206ENST00000504751 CD163L1Q9NR16 1453 aa1.18□□□□□ -2.22
TRAPPC13-206ENST00000504751 SAMD9Q5K651 1589 aa1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 SETBP1Q9Y6X0 1596 aa1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 URB1O60287 2271 aaKnown RBP1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 COL14A1Q05707 1796 aaKnown RBP1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 NAV3Q8IVL0 2385 aa1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 TRBV6-1A0A0K0K1D8 114 aa1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 HMGA1P17096 107 aaKnown RBP1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 IFI27P40305 119 aaPredicted RBP1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 C10orf95Q9H7T3 257 aa1.17□□□□□ -2.22
TRAPPC13-206ENST00000504751 BCORQ6W2J9 1755 aa1.16□□□□□ -2.22
TRAPPC13-206ENST00000504751 USP32Q8NFA0 1604 aa1.16□□□□□ -2.22
TRAPPC13-206ENST00000504751 H3BVH4 76 aa1.16□□□□□ -2.22
TRAPPC13-206ENST00000504751 PIN1P1O15428 100 aa1.16□□□□□ -2.22
TRAPPC13-206ENST00000504751 DEFB112Q30KQ8 113 aa1.16□□□□□ -2.22
TRAPPC13-206ENST00000504751 UBE2DNLQ8IWF7 75 aa1.16□□□□□ -2.22
TRAPPC13-206ENST00000504751 S100ZQ8WXG8 99 aa1.16□□□□□ -2.22
TRAPPC13-206ENST00000504751 ABCA9Q8IUA7 1624 aa1.15□□□□□ -2.22
TRAPPC13-206ENST00000504751 DOT1LQ8TEK3 1739 aa1.15□□□□□ -2.22
TRAPPC13-206ENST00000504751 PARP4Q9UKK3 1724 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-206ENST00000504751 ASH1LQ9NR48 2969 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-206ENST00000504751 GOLGA4Q13439 2230 aaKnown RBP1.15□□□□□ -2.23
TRAPPC13-206ENST00000504751 COX8AP10176 69 aa1.15□□□□□ -2.23
TRAPPC13-206ENST00000504751 ERCC6L2Q5T890 1561 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms