RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 ROS1P08922 2347 aa9.3□□□□□ -0.92
SMTN-221ENST00000504335 LMO4P61968 165 aa9.3□□□□□ -0.92
SMTN-221ENST00000504335 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
SMTN-221ENST00000504335 TPRP12270 2363 aaKnown RBP9.3□□□□□ -0.92
SMTN-221ENST00000504335 H3BUA1 57 aa9.29□□□□□ -0.92
SMTN-221ENST00000504335 Q6ZQY7 126 aa9.29□□□□□ -0.92
SMTN-221ENST00000504335 Q75L30 129 aa9.29□□□□□ -0.92
SMTN-221ENST00000504335 ELOF1P60002 83 aaKnown RBP9.29□□□□□ -0.92
SMTN-221ENST00000504335 Q8N9P0 234 aaPredicted RBP9.29□□□□□ -0.92
SMTN-221ENST00000504335 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
SMTN-221ENST00000504335 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
SMTN-221ENST00000504335 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
SMTN-221ENST00000504335 PKDREJQ9NTG1 2253 aa9.27□□□□□ -0.92
SMTN-221ENST00000504335 PRR15LQ9BU68 103 aa9.27□□□□□ -0.93
SMTN-221ENST00000504335 CDC42SE1Q9NRR8 79 aa9.27□□□□□ -0.93
SMTN-221ENST00000504335 A6NED7 52 aa9.27□□□□□ -0.93
SMTN-221ENST00000504335 C19orf84I3L1E1 186 aa9.26□□□□□ -0.93
SMTN-221ENST00000504335 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
SMTN-221ENST00000504335 A0A1W2PNU3 283 aaPredicted RBP9.26□□□□□ -0.93
SMTN-221ENST00000504335 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
SMTN-221ENST00000504335 SORL1Q92673 2214 aa9.26□□□□□ -0.93
SMTN-221ENST00000504335 RP1L1Q8IWN7 2480 aaPredicted RBP9.25□□□□□ -0.93
SMTN-221ENST00000504335 TRGV2A0A075B6R0 118 aa9.25□□□□□ -0.93
SMTN-221ENST00000504335 PLA2G2AP14555 144 aa9.24□□□□□ -0.93
SMTN-221ENST00000504335 COX17Q14061 63 aa9.24□□□□□ -0.93
SMTN-221ENST00000504335 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.24□□□□□ -0.93
SMTN-221ENST00000504335 LINC00612Q8N6U2 182 aa9.24□□□□□ -0.93
SMTN-221ENST00000504335 CELA1Q9UNI1 258 aa9.24□□□□□ -0.93
SMTN-221ENST00000504335 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
SMTN-221ENST00000504335 VPREB1P12018 145 aa9.24□□□□□ -0.93
SMTN-221ENST00000504335 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
SMTN-221ENST00000504335 B9D2Q9BPU9 175 aa9.23□□□□□ -0.93
SMTN-221ENST00000504335 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
SMTN-221ENST00000504335 Q8IZM0 81 aa9.22□□□□□ -0.93
SMTN-221ENST00000504335 PRR26Q8N8Z3 221 aa9.22□□□□□ -0.93
SMTN-221ENST00000504335 DOPEY2Q9Y3R5 2298 aa9.22□□□□□ -0.93
SMTN-221ENST00000504335 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.21□□□□□ -0.93
SMTN-221ENST00000504335 PRR4Q16378 134 aa9.21□□□□□ -0.93
SMTN-221ENST00000504335 IGHV4-30-2A0A087WSY4 118 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 IGKV3OR2-268A0A0C4DH90 116 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 LOC100131303A0A0U1RQF7 123 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 MUC6Q6W4X9 2439 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 Q9BRP9 147 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 SPTBN2O15020 2390 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 CACNA1HO95180 2353 aa9.2□□□□□ -0.94
SMTN-221ENST00000504335 SPTBN1Q01082 2364 aaKnown RBP9.2□□□□□ -0.94
SMTN-221ENST00000504335 KHDC1LQ5JSQ8 128 aa9.19□□□□□ -0.94
SMTN-221ENST00000504335 LINC00208Q96KT6 92 aa9.19□□□□□ -0.94
SMTN-221ENST00000504335 ZFHX2Q9C0A1 2572 aaPredicted RBP9.18□□□□□ -0.94
SMTN-221ENST00000504335 PCNX1Q96RV3 2341 aa9.18□□□□□ -0.94
SMTN-221ENST00000504335 GPR179Q6PRD1 2367 aa9.18□□□□□ -0.94
SMTN-221ENST00000504335 A8MTW9 85 aa9.18□□□□□ -0.94
SMTN-221ENST00000504335 PRM2P04554 102 aa9.18□□□□□ -0.94
SMTN-221ENST00000504335 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
SMTN-221ENST00000504335 C10orf25Q5T742 122 aa9.18□□□□□ -0.94
SMTN-221ENST00000504335 CCL24O00175 119 aa9.17□□□□□ -0.94
SMTN-221ENST00000504335 MOBPQ13875 183 aa9.17□□□□□ -0.94
SMTN-221ENST00000504335 CACNA1BQ00975 2339 aa9.17□□□□□ -0.94
SMTN-221ENST00000504335 DEFB124Q8NES8 71 aa9.17□□□□□ -0.94
SMTN-221ENST00000504335 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
SMTN-221ENST00000504335 DMXL2Q8TDJ6 3036 aa9.15□□□□□ -0.94
SMTN-221ENST00000504335 DMXL1Q9Y485 3027 aa9.15□□□□□ -0.94
SMTN-221ENST00000504335 RIF1Q5UIP0 2472 aaKnown RBP9.15□□□□□ -0.95
SMTN-221ENST00000504335 IGLV6-57P01721 117 aa9.15□□□□□ -0.95
SMTN-221ENST00000504335 EP300Q09472 2414 aaPredicted RBP9.15□□□□□ -0.95
SMTN-221ENST00000504335 PTPRZ1P23471 2315 aaPredicted RBP9.14□□□□□ -0.95
SMTN-221ENST00000504335 PRB2P02812 416 aaPredicted RBP9.14□□□□□ -0.95
SMTN-221ENST00000504335 IGHV4-30-4P0DP06 118 aa9.14□□□□□ -0.95
SMTN-221ENST00000504335 LINC01554Q52M75 96 aa9.14□□□□□ -0.95
SMTN-221ENST00000504335 SPENQ96T58 3664 aaKnown RBP9.14□□□□□ -0.95
SMTN-221ENST00000504335 A0A1B0GW54 56 aa9.13□□□□□ -0.95
SMTN-221ENST00000504335 TACC2O95359 2948 aa9.13□□□□□ -0.95
SMTN-221ENST00000504335 LINC00959A0A1B0GUT2 108 aa9.13□□□□□ -0.95
SMTN-221ENST00000504335 KLK12Q9UKR0 248 aa9.12□□□□□ -0.95
SMTN-221ENST00000504335 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
SMTN-221ENST00000504335 IGLV1-40P01703 118 aa9.11□□□□□ -0.95
SMTN-221ENST00000504335 ZFP36P26651 326 aaKnown RBP9.11□□□□□ -0.95
SMTN-221ENST00000504335 CSMD1Q96PZ7 3565 aa9.11□□□□□ -0.95
SMTN-221ENST00000504335 TRGV4A0A0C4DH28 118 aa9.11□□□□□ -0.95
SMTN-221ENST00000504335 TRGV1A0A0A0MS02 117 aa9.1□□□□□ -0.95
SMTN-221ENST00000504335 MP68P56378 58 aa9.1□□□□□ -0.95
SMTN-221ENST00000504335 ST20-AS1Q8NBB2 130 aa9.1□□□□□ -0.95
SMTN-221ENST00000504335 MDFIQ99750 246 aa9.1□□□□□ -0.95
SMTN-221ENST00000504335 INSP01308 110 aa9.1□□□□□ -0.95
SMTN-221ENST00000504335 Q8NDZ9 215 aa9.1□□□□□ -0.95
SMTN-221ENST00000504335 PIEZO1Q92508 2521 aa9.1□□□□□ -0.95
SMTN-221ENST00000504335 SMG1Q96Q15 3661 aaKnown RBP9.1□□□□□ -0.95
SMTN-221ENST00000504335 CNOT1A5YKK6 2376 aaKnown RBP9.09□□□□□ -0.95
SMTN-221ENST00000504335 OTOGLQ3ZCN5 2332 aa9.09□□□□□ -0.95
SMTN-221ENST00000504335 IGHV4-59P01825 116 aa9.09□□□□□ -0.95
SMTN-221ENST00000504335 DEFB131AP59861 70 aa9.08□□□□□ -0.96
SMTN-221ENST00000504335 APC2O95996 2303 aa9.08□□□□□ -0.96
SMTN-221ENST00000504335 ASPMQ8IZT6 3477 aa9.08□□□□□ -0.96
SMTN-221ENST00000504335 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
SMTN-221ENST00000504335 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
SMTN-221ENST00000504335 LINC00313P59037 77 aa9.07□□□□□ -0.96
SMTN-221ENST00000504335 MAP1BP46821 2468 aaKnown RBP9.07□□□□□ -0.96
SMTN-221ENST00000504335 ZFHX4Q86UP3 3567 aa9.06□□□□□ -0.96
SMTN-221ENST00000504335 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms