RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 SPAG11AQ6PDA7 123 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 C4orf3Q8WVX3 66 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNF625Q96I27 306 aaPredicted RBP1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 TTTY10Q9BZA0 68 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 KCNQ1DNQ9H478 68 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNRD1Q9P1U0 126 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ANKRD12Q6UB98 2062 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGHV3-64A0A075B6Q5 118 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 CLPSL1A2RUU4 121 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 C17orf98A8MV24 154 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 NDUFA1O15239 70 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 MRPL33O75394 65 aaKnown RBP1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1-17P01599 117 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV3-19P01714 112 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 CCL18P55774 89 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 COX17Q14061 63 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 LINC00483Q53H64 154 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPATA8Q6RVD6 105 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q6ZS52 159 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 NTM-AS1Q6ZSK4 140 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEFB106AQ8N104 65 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 MIR7-3HGQ8N6C7 128 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q8NAQ8 132 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 WFDC9Q8NEX5 89 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 C16orf74Q96GX8 76 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 C20orf166-AS1Q96NR2 134 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 WFDC10AQ9H1F0 79 aa1.19□□□□□ -2.22
HMGB3P17-201ENST00000504195 PCNX2A6NKB5 2137 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 ETDCA0A1B0GVM5 59 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 NUPR2A6NF83 97 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 NDUFA4O00483 81 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGHV3-53P01767 116 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 CCL3L1P16619 93 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 KRTAP25-1Q3LHN0 102 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 CSAG1Q6PB30 78 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 ADM2Q7Z4H4 148 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 LINC00308Q8TCZ7 52 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPRR4Q96PI1 79 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 TTTY12Q9BZ98 90 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 MYOFQ9NZM1 2061 aa1.18□□□□□ -2.22
HMGB3P17-201ENST00000504195 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 NUP214P35658 2090 aaPredicted RBP1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 MDC1Q14676 2089 aaKnown RBP1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 CEP192Q8TEP8 1941 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 DSCAMO60469 2012 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZFHX3Q15911 3703 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 TRGV2A0A075B6R0 118 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1D-37A0A075B6S9 117 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1OR2-108A0A075B7D4 117 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 TRGV4A0A0C4DH28 118 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPRR5A0A1B0GTR4 108 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV7-43P04211 117 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEFA4P12838 97 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 HAMPP81172 84 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 PRCDQ00LT1 54 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q8TAT8 98 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 CIRBP-AS1Q8TBR5 109 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 GAFA1Q96PS6 74 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 ATG2BQ96BY7 2078 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 HIVEP2P31629 2446 aa1.17□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV3-7A0A075B6H7 116 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2-28A0A075B6P5 120 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV3D-11A0A0A0MRZ8 115 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2-29A2NJV5 120 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 A8MUU9 505 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 CCL22O00626 93 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 NCR3O14931 201 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 INSP01308 110 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2D-28P01615 120 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV4-1P06312 121 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 P0C880 135 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 TLX1NBP0CAT3 122 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 PRB4P10163 310 aaPredicted RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 COX7BP24311 80 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 CRIP1P50238 77 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 POLR2KP53803 58 aaKnown RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 Q5W150 140 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEFB132Q7Z7B7 95 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 COA5Q86WW8 74 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 FDCSPQ8NFU4 85 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 SNRNP200O75643 2136 aaKnown RBP1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 TET1Q8NFU7 2136 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 MPDZO75970 2070 aa1.16□□□□□ -2.22
HMGB3P17-201ENST00000504195 MYO9BQ13459 2157 aa1.15□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV2D-24A0A075B6R9 120 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 DEFB131BA0A096LNP1 70 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 A0A1B0GU33 70 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 LRCOL1A6NCL2 159 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 SPINK7P58062 85 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 DEFB113Q30KQ7 82 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 C9orf163Q8N9P6 203 aa1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 HEATR1Q9H583 2144 aaKnown RBP1.15□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGLV4-60A0A075B6I1 120 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 TRBV6-4A0A1B0GX49 114 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 TFF1P04155 84 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 RPS27P42677 84 aaKnown RBP1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 DEFB112Q30KQ8 113 aa1.14□□□□□ -2.23
HMGB3P17-201ENST00000504195 PIGYQ3MUY2 71 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms