RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NKAPP1Q8N9T2 125 aa8.88□□□□□ -0.99
PDLIM7-210ENST00000503827 CEBPGP53567 150 aa8.87□□□□□ -0.99
PDLIM7-210ENST00000503827 EIF5A2Q9GZV4 153 aaKnown RBP8.87□□□□□ -0.99
PDLIM7-210ENST00000503827 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
PDLIM7-210ENST00000503827 IGLV5-37A0A075B6J1 123 aa8.86□□□□□ -0.99
PDLIM7-210ENST00000503827 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
PDLIM7-210ENST00000503827 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
PDLIM7-210ENST00000503827 RAB5AP20339 215 aa8.86□□□□□ -0.99
PDLIM7-210ENST00000503827 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
PDLIM7-210ENST00000503827 LORP23490 312 aaPredicted RBP8.85□□□□□ -0.99
PDLIM7-210ENST00000503827 LINC01551Q86U37 167 aa8.85□□□□□ -0.99
PDLIM7-210ENST00000503827 DAND5Q8N907 189 aa8.85□□□□□ -0.99
PDLIM7-210ENST00000503827 PLEKHB2Q96CS7 222 aa8.85□□□□□ -0.99
PDLIM7-210ENST00000503827 CXCL5P42830 114 aa8.84□□□□□ -0.99
PDLIM7-210ENST00000503827 NAT8BQ9UHF3 227 aa8.84□□□□□ -0.99
PDLIM7-210ENST00000503827 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
PDLIM7-210ENST00000503827 D6R8Y8 96 aa8.83□□□□□ -1
PDLIM7-210ENST00000503827 NPYP01303 97 aa8.83□□□□□ -1
PDLIM7-210ENST00000503827 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
PDLIM7-210ENST00000503827 V9GYV3 84 aa8.83□□□□□ -1
PDLIM7-210ENST00000503827 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
PDLIM7-210ENST00000503827 ZC2HC1BQ5TFG8 222 aa8.82□□□□□ -1
PDLIM7-210ENST00000503827 SMIM7Q9BQ49 75 aa8.82□□□□□ -1
PDLIM7-210ENST00000503827 GNB1LQ9BYB4 327 aa8.82□□□□□ -1
PDLIM7-210ENST00000503827 VCX2Q9H322 139 aa8.82□□□□□ -1
PDLIM7-210ENST00000503827 NDUFA12Q9UI09 145 aa8.82□□□□□ -1
PDLIM7-210ENST00000503827 XP32Q5T750 250 aa8.81□□□□□ -1
PDLIM7-210ENST00000503827 CBLN2Q8IUK8 224 aa8.81□□□□□ -1
PDLIM7-210ENST00000503827 TMEM126AQ9H061 195 aa8.81□□□□□ -1
PDLIM7-210ENST00000503827 A0A1B0GW15 77 aa8.8□□□□□ -1
PDLIM7-210ENST00000503827 SCO1O75880 301 aa8.8□□□□□ -1
PDLIM7-210ENST00000503827 SPINK1P00995 79 aa8.8□□□□□ -1
PDLIM7-210ENST00000503827 FAM74A3Q4VXF1 159 aa8.8□□□□□ -1
PDLIM7-210ENST00000503827 Q8NBF4 154 aa8.8□□□□□ -1
PDLIM7-210ENST00000503827 AMELXQ99217 191 aa8.8□□□□□ -1
PDLIM7-210ENST00000503827 PPBPP02775 128 aa8.79□□□□□ -1
PDLIM7-210ENST00000503827 HERVK_113P63121 156 aa8.79□□□□□ -1
PDLIM7-210ENST00000503827 SEC11AP67812 179 aa8.79□□□□□ -1
PDLIM7-210ENST00000503827 FAM19A3Q7Z5A8 133 aa8.79□□□□□ -1
PDLIM7-210ENST00000503827 CDKN2A-AS1Q9UH64 79 aa8.79□□□□□ -1
PDLIM7-210ENST00000503827 TMEM238C9JI98 176 aa8.78□□□□□ -1
PDLIM7-210ENST00000503827 F8W036 122 aa8.78□□□□□ -1
PDLIM7-210ENST00000503827 C2orf66Q6UXQ4 117 aa8.78□□□□□ -1
PDLIM7-210ENST00000503827 HIGD2AQ9BW72 106 aa8.78□□□□□ -1
PDLIM7-210ENST00000503827 RAB5BP61020 215 aa8.77□□□□□ -1.01
PDLIM7-210ENST00000503827 GEMIN7Q9H840 131 aaKnown RBP8.77□□□□□ -1.01
PDLIM7-210ENST00000503827 CYSLTR1Q9Y271 337 aa8.77□□□□□ -1.01
PDLIM7-210ENST00000503827 S100A8P05109 93 aa8.76□□□□□ -1.01
PDLIM7-210ENST00000503827 RGS21Q2M5E4 152 aa8.76□□□□□ -1.01
PDLIM7-210ENST00000503827 FAM19A2Q8N3H0 131 aa8.76□□□□□ -1.01
PDLIM7-210ENST00000503827 SPRR4Q96PI1 79 aa8.76□□□□□ -1.01
PDLIM7-210ENST00000503827 M0R378 163 aa8.75□□□□□ -1.01
PDLIM7-210ENST00000503827 ORMDL3Q8N138 153 aa8.75□□□□□ -1.01
PDLIM7-210ENST00000503827 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
PDLIM7-210ENST00000503827 M0R2T5 61 aa8.74□□□□□ -1.01
PDLIM7-210ENST00000503827 NPSP0C0P6 89 aa8.74□□□□□ -1.01
PDLIM7-210ENST00000503827 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
PDLIM7-210ENST00000503827 COX7B2Q8TF08 81 aa8.74□□□□□ -1.01
PDLIM7-210ENST00000503827 ZNF706Q9Y5V0 76 aaPredicted RBP8.74□□□□□ -1.01
PDLIM7-210ENST00000503827 TMEM136Q6ZRR5 245 aa8.73□□□□□ -1.01
PDLIM7-210ENST00000503827 PRELID3AQ96N28 172 aa8.73□□□□□ -1.01
PDLIM7-210ENST00000503827 BLOC1S1P78537 153 aa8.72□□□□□ -1.01
PDLIM7-210ENST00000503827 PDZD11Q5EBL8 140 aa8.72□□□□□ -1.01
PDLIM7-210ENST00000503827 MRPL54Q6P161 138 aaKnown RBP8.72□□□□□ -1.01
PDLIM7-210ENST00000503827 LOC389332A0A1B0GUA5 103 aa8.71□□□□□ -1.02
PDLIM7-210ENST00000503827 SMIM1B2RUZ4 78 aa8.71□□□□□ -1.02
PDLIM7-210ENST00000503827 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.02
PDLIM7-210ENST00000503827 IGLV8-61A0A075B6I0 122 aa8.7□□□□□ -1.02
PDLIM7-210ENST00000503827 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
PDLIM7-210ENST00000503827 PRSS47A8MTI9 375 aa8.7□□□□□ -1.02
PDLIM7-210ENST00000503827 VPREB1P12018 145 aa8.7□□□□□ -1.02
PDLIM7-210ENST00000503827 Q8N377 158 aa8.7□□□□□ -1.02
PDLIM7-210ENST00000503827 SLC25A20O43772 301 aa8.69□□□□□ -1.02
PDLIM7-210ENST00000503827 RPS29P62273 56 aaKnown RBP8.69□□□□□ -1.02
PDLIM7-210ENST00000503827 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
PDLIM7-210ENST00000503827 MAP1LC3AQ9H492 121 aa8.69□□□□□ -1.02
PDLIM7-210ENST00000503827 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
PDLIM7-210ENST00000503827 A0A1B0GXF2 115 aa8.68□□□□□ -1.02
PDLIM7-210ENST00000503827 RPL23P62829 140 aaKnown RBP8.68□□□□□ -1.02
PDLIM7-210ENST00000503827 ORMDL2Q53FV1 153 aa8.68□□□□□ -1.02
PDLIM7-210ENST00000503827 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
PDLIM7-210ENST00000503827 ATP5LO75964 103 aa8.67□□□□□ -1.02
PDLIM7-210ENST00000503827 SRP19P09132 144 aaKnown RBP8.67□□□□□ -1.02
PDLIM7-210ENST00000503827 ADIRFQ15847 76 aa8.67□□□□□ -1.02
PDLIM7-210ENST00000503827 Q8N8P6 123 aa8.67□□□□□ -1.02
PDLIM7-210ENST00000503827 LAMTOR2Q9Y2Q5 125 aa8.67□□□□□ -1.02
PDLIM7-210ENST00000503827 PFN2P35080 140 aa8.66□□□□□ -1.02
PDLIM7-210ENST00000503827 RAB14P61106 215 aa8.64□□□□□ -1.03
PDLIM7-210ENST00000503827 SND1-IT1Q9HBX3 110 aa8.64□□□□□ -1.03
PDLIM7-210ENST00000503827 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
PDLIM7-210ENST00000503827 K7EMI3 77 aa8.63□□□□□ -1.03
PDLIM7-210ENST00000503827 ALKAL2Q6UX46 152 aa8.63□□□□□ -1.03
PDLIM7-210ENST00000503827 TIMM17AQ99595 171 aa8.63□□□□□ -1.03
PDLIM7-210ENST00000503827 IGLV5-45A0A087WSX0 123 aa8.62□□□□□ -1.03
PDLIM7-210ENST00000503827 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
PDLIM7-210ENST00000503827 G0S2P27469 103 aa8.62□□□□□ -1.03
PDLIM7-210ENST00000503827 AKAP14Q86UN6 197 aa8.62□□□□□ -1.03
PDLIM7-210ENST00000503827 MOBPQ13875 183 aa8.61□□□□□ -1.03
PDLIM7-210ENST00000503827 SSBP3-AS1Q7Z2R9 100 aa8.61□□□□□ -1.03
PDLIM7-210ENST00000503827 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms