RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 TINCRA0A1B0GVN0 87 aa9.85□□□□□ -0.83
DDR1-250ENST00000503628 NDUFA6P56556 154 aa9.85□□□□□ -0.83
DDR1-250ENST00000503628 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BKO60814 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BJP06899 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BOP23527 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BBP33778 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BDP58876 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BCP62807 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST2H2BEQ16778 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.84□□□□□ -0.83
DDR1-250ENST00000503628 REG3GQ6UW15 175 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BHQ93079 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BNQ99877 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 HIST1H2BMQ99879 126 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 CDKN2A-AS1Q9UH64 79 aa9.84□□□□□ -0.83
DDR1-250ENST00000503628 MAJINQ3KP22 176 aa9.83□□□□□ -0.84
DDR1-250ENST00000503628 SPINK6Q6UWN8 80 aa9.83□□□□□ -0.84
DDR1-250ENST00000503628 IFI27L1Q96BM0 104 aa9.83□□□□□ -0.84
DDR1-250ENST00000503628 CAMK2N2Q96S95 79 aa9.83□□□□□ -0.84
DDR1-250ENST00000503628 IGLV5-45A0A087WSX0 123 aa9.82□□□□□ -0.84
DDR1-250ENST00000503628 F8WDY8 70 aa9.82□□□□□ -0.84
DDR1-250ENST00000503628 NUPR1O60356 82 aa9.82□□□□□ -0.84
DDR1-250ENST00000503628 LINC00469Q8N7U9 141 aa9.82□□□□□ -0.84
DDR1-250ENST00000503628 KRTAP9-2Q9BYQ4 174 aa9.82□□□□□ -0.84
DDR1-250ENST00000503628 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
DDR1-250ENST00000503628 IGLC3P0DOY3 106 aa9.81□□□□□ -0.84
DDR1-250ENST00000503628 STPG4Q8N801 248 aa9.81□□□□□ -0.84
DDR1-250ENST00000503628 PACRGQ96M98 296 aaPredicted RBP9.81□□□□□ -0.84
DDR1-250ENST00000503628 KIAA0087Q14695 138 aa9.8□□□□□ -0.84
DDR1-250ENST00000503628 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
DDR1-250ENST00000503628 NDUFA1O15239 70 aa9.79□□□□□ -0.84
DDR1-250ENST00000503628 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
DDR1-250ENST00000503628 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
DDR1-250ENST00000503628 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
DDR1-250ENST00000503628 SMIM1B2RUZ4 78 aa9.78□□□□□ -0.84
DDR1-250ENST00000503628 PRSS2P07478 247 aa9.78□□□□□ -0.84
DDR1-250ENST00000503628 MRPL35Q9NZE8 188 aaKnown RBP9.78□□□□□ -0.84
DDR1-250ENST00000503628 TOMM7Q9P0U1 55 aa9.78□□□□□ -0.84
DDR1-250ENST00000503628 CHTOPQ9Y3Y2 248 aaKnown RBP9.78□□□□□ -0.84
DDR1-250ENST00000503628 H3BRM9 83 aa9.77□□□□□ -0.85
DDR1-250ENST00000503628 RNF151Q2KHN1 245 aa9.77□□□□□ -0.85
DDR1-250ENST00000503628 UNQ6190/PRO20217Q6UXQ8 127 aa9.77□□□□□ -0.85
DDR1-250ENST00000503628 Q8IZM0 81 aa9.77□□□□□ -0.85
DDR1-250ENST00000503628 HSPB8Q9UJY1 196 aa9.77□□□□□ -0.85
DDR1-250ENST00000503628 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
DDR1-250ENST00000503628 FABP4P15090 132 aa9.76□□□□□ -0.85
DDR1-250ENST00000503628 ZNF22P17026 224 aaPredicted RBP9.76□□□□□ -0.85
DDR1-250ENST00000503628 C6orf226Q5I0X4 101 aa9.76□□□□□ -0.85
DDR1-250ENST00000503628 C10orf25Q5T742 122 aa9.76□□□□□ -0.85
DDR1-250ENST00000503628 A0A096LNI7 61 aa9.75□□□□□ -0.85
DDR1-250ENST00000503628 LOC107984640A0A0U1RRK4 108 aa9.75□□□□□ -0.85
DDR1-250ENST00000503628 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
DDR1-250ENST00000503628 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
DDR1-250ENST00000503628 F8VRH5 84 aa9.74□□□□□ -0.85
DDR1-250ENST00000503628 H0Y8G0 127 aa9.74□□□□□ -0.85
DDR1-250ENST00000503628 CKS1BP61024 79 aa9.74□□□□□ -0.85
DDR1-250ENST00000503628 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
DDR1-250ENST00000503628 C6orf48Q9UBA6 75 aa9.74□□□□□ -0.85
DDR1-250ENST00000503628 TRBV30A0A0K0K1B3 111 aa9.73□□□□□ -0.85
DDR1-250ENST00000503628 TMEM170BQ5T4T1 132 aa9.73□□□□□ -0.85
DDR1-250ENST00000503628 COX7B2Q8TF08 81 aa9.73□□□□□ -0.85
DDR1-250ENST00000503628 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
DDR1-250ENST00000503628 IGLV5-39A0A0G2JS06 123 aa9.72□□□□□ -0.85
DDR1-250ENST00000503628 CXCL5P42830 114 aa9.72□□□□□ -0.85
DDR1-250ENST00000503628 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
DDR1-250ENST00000503628 Q6ZRP5 223 aa9.72□□□□□ -0.85
DDR1-250ENST00000503628 MUC2Q02817 5179 aa9.72□□□□□ -0.85
DDR1-250ENST00000503628 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.86
DDR1-250ENST00000503628 GAGE2BQ13066 116 aa9.71□□□□□ -0.86
DDR1-250ENST00000503628 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
DDR1-250ENST00000503628 MAP1LC3CQ9BXW4 147 aa9.7□□□□□ -0.86
DDR1-250ENST00000503628 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
DDR1-250ENST00000503628 TMEM223A0PJW6 202 aa9.67□□□□□ -0.86
DDR1-250ENST00000503628 PLNP26678 52 aa9.67□□□□□ -0.86
DDR1-250ENST00000503628 KRTAP9-6A0A140TA67 174 aa9.66□□□□□ -0.86
DDR1-250ENST00000503628 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
DDR1-250ENST00000503628 SYS1-DBNDD2H3BUS1 97 aa9.65□□□□□ -0.86
DDR1-250ENST00000503628 DPM2O94777 84 aa9.65□□□□□ -0.86
DDR1-250ENST00000503628 GAGE2EQ4V326 116 aa9.65□□□□□ -0.86
DDR1-250ENST00000503628 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.86
DDR1-250ENST00000503628 GAGE2DQ9UEU5 116 aa9.65□□□□□ -0.86
DDR1-250ENST00000503628 IGKCP01834 107 aa9.64□□□□□ -0.87
DDR1-250ENST00000503628 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
DDR1-250ENST00000503628 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
DDR1-250ENST00000503628 SFTA2Q6UW10 78 aa9.62□□□□□ -0.87
DDR1-250ENST00000503628 PET117Q6UWS5 81 aa9.62□□□□□ -0.87
DDR1-250ENST00000503628 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
DDR1-250ENST00000503628 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
DDR1-250ENST00000503628 LINC01545Q5VT33 79 aa9.61□□□□□ -0.87
DDR1-250ENST00000503628 PRR26Q8N8Z3 221 aa9.61□□□□□ -0.87
DDR1-250ENST00000503628 S100A6P06703 90 aa9.6□□□□□ -0.87
DDR1-250ENST00000503628 KRTDAPP60985 99 aa9.6□□□□□ -0.87
DDR1-250ENST00000503628 HERVK_113P61574 105 aa9.6□□□□□ -0.87
DDR1-250ENST00000503628 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
DDR1-250ENST00000503628 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
DDR1-250ENST00000503628 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms