RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-218	ENST00000503547		A0A087X002	238 aa		5.25	□□□□□ -1.57
NR1I3-218	ENST00000503547	PPBP	P02775	128 aa		5.25	□□□□□ -1.57
NR1I3-218	ENST00000503547	C6orf226	Q5I0X4	101 aa		5.25	□□□□□ -1.57
NR1I3-218	ENST00000503547	LOC389332	A0A1B0GUA5	103 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	ATP6V1G1	O75348	118 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	MRPL55	Q7Z7F7	128 aa	Known RBP	5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	AKAP14	Q86UN6	197 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	ORMDL3	Q8N138	153 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	PRELID3A	Q96N28	172 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	RETNLB	Q9BQ08	111 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	NAT8	Q9UHE5	227 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	PYGO1	Q9Y3Y4	419 aa		5.24	□□□□□ -1.57
NR1I3-218	ENST00000503547	BCE1	O60756	84 aa		5.23	□□□□□ -1.57
NR1I3-218	ENST00000503547	ZC2HC1B	Q5TFG8	222 aa		5.23	□□□□□ -1.57
NR1I3-218	ENST00000503547	TMEM136	Q6ZRR5	245 aa		5.23	□□□□□ -1.57
NR1I3-218	ENST00000503547	LINC01561	Q8N1V8	128 aa		5.23	□□□□□ -1.57
NR1I3-218	ENST00000503547	VCX2	Q9H322	139 aa		5.23	□□□□□ -1.57
NR1I3-218	ENST00000503547	CYSLTR1	Q9Y271	337 aa		5.23	□□□□□ -1.57
NR1I3-218	ENST00000503547	KRTAP9-6	A0A140TA67	174 aa		5.22	□□□□□ -1.57
NR1I3-218	ENST00000503547	GAGE10	A6NGK3	116 aa		5.22	□□□□□ -1.57
NR1I3-218	ENST00000503547	RPL37AP8	A6NKH3	93 aa		5.22	□□□□□ -1.57
NR1I3-218	ENST00000503547	PRSS47	A8MTI9	375 aa		5.22	□□□□□ -1.57
NR1I3-218	ENST00000503547		Q8IZM0	81 aa		5.22	□□□□□ -1.57
NR1I3-218	ENST00000503547	MAP1LC3A	Q9H492	121 aa		5.22	□□□□□ -1.57
NR1I3-218	ENST00000503547	ANAPC11	Q9NYG5	84 aa		5.22	□□□□□ -1.57
NR1I3-218	ENST00000503547		A0A1B0GXF2	115 aa		5.21	□□□□□ -1.58
NR1I3-218	ENST00000503547		F8VRH5	84 aa		5.21	□□□□□ -1.58
NR1I3-218	ENST00000503547	UBE2A	P49459	152 aa		5.21	□□□□□ -1.58
NR1I3-218	ENST00000503547	C2orf66	Q6UXQ4	117 aa		5.21	□□□□□ -1.58
NR1I3-218	ENST00000503547	LINC00304	Q8N9R0	145 aa		5.21	□□□□□ -1.58
NR1I3-218	ENST00000503547	GEMIN7	Q9H840	131 aa	Known RBP	5.21	□□□□□ -1.58
NR1I3-218	ENST00000503547	TP73-AS1	Q9UF72	201 aa		5.21	□□□□□ -1.58
NR1I3-218	ENST00000503547	HERVK_113	P63121	156 aa		5.2	□□□□□ -1.58
NR1I3-218	ENST00000503547	NDUFA5	Q16718	116 aa		5.2	□□□□□ -1.58
NR1I3-218	ENST00000503547	LINC00173	Q6ZV60	143 aa		5.2	□□□□□ -1.58
NR1I3-218	ENST00000503547	LINC00167	Q96N53	147 aa		5.2	□□□□□ -1.58
NR1I3-218	ENST00000503547	IGKV2D-26	A0A0A0MRZ7	120 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547		C9JQL5	133 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	CXCL5	P42830	114 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	SEC11A	P67812	179 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	PEA15	Q15121	130 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	KRTAP13-2	Q52LG2	175 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	ATP5L2	Q7Z4Y8	100 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547		Q8N8P6	123 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	NKAPP1	Q8N9T2	125 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	AMELX	Q99217	191 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	CDKN2A-AS1	Q9UH64	79 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	LAMTOR2	Q9Y2Q5	125 aa		5.19	□□□□□ -1.58
NR1I3-218	ENST00000503547	IGLV7-46	A0A075B6I9	117 aa		5.18	□□□□□ -1.58
NR1I3-218	ENST00000503547	S100A1	P23297	94 aa		5.18	□□□□□ -1.58
NR1I3-218	ENST00000503547	ORMDL2	Q53FV1	153 aa		5.18	□□□□□ -1.58
NR1I3-218	ENST00000503547	PAPPA-AS1	Q5QFB9	102 aa		5.18	□□□□□ -1.58
NR1I3-218	ENST00000503547	NPS	P0C0P6	89 aa		5.17	□□□□□ -1.58
NR1I3-218	ENST00000503547	RAB5B	P61020	215 aa		5.17	□□□□□ -1.58
NR1I3-218	ENST00000503547	SRSF3	P84103	164 aa	Known RBP	5.17	□□□□□ -1.58
NR1I3-218	ENST00000503547	TPRXL	Q17RH7	258 aa		5.17	□□□□□ -1.58
NR1I3-218	ENST00000503547	FAM229B	Q4G0N7	80 aa		5.17	□□□□□ -1.58
NR1I3-218	ENST00000503547	MUC17	Q685J3	4493 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	IGKV2-28	A0A075B6P5	120 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	IGIP	A6NJ69	53 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	IGKV2D-28	P01615	120 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	IFITM2	Q01629	132 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	PNRC1	Q12796	327 aa	Predicted RBP	5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	FAM19A3	Q7Z5A8	133 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	COX7B2	Q8TF08	81 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547	KRTAP4-8	Q9BYQ9	185 aa		5.16	□□□□□ -1.58
NR1I3-218	ENST00000503547		K7EMI3	77 aa		5.15	□□□□□ -1.59
NR1I3-218	ENST00000503547	G0S2	P27469	103 aa		5.15	□□□□□ -1.59
NR1I3-218	ENST00000503547	PRLH	P81277	87 aa		5.15	□□□□□ -1.59
NR1I3-218	ENST00000503547	KRTAP13-1	Q8IUC0	172 aa		5.15	□□□□□ -1.59
NR1I3-218	ENST00000503547	NXT2	Q9NPJ8	142 aa	Known RBP	5.15	□□□□□ -1.59
NR1I3-218	ENST00000503547	SMIM1	B2RUZ4	78 aa		5.14	□□□□□ -1.59
NR1I3-218	ENST00000503547	SCO1	O75880	301 aa		5.14	□□□□□ -1.59
NR1I3-218	ENST00000503547	PDZD11	Q5EBL8	140 aa		5.14	□□□□□ -1.59
NR1I3-218	ENST00000503547	FAM19A1	Q7Z5A9	133 aa		5.14	□□□□□ -1.59
NR1I3-218	ENST00000503547	TIMM17A	Q99595	171 aa		5.14	□□□□□ -1.59
NR1I3-218	ENST00000503547	PPDPF	Q9H3Y8	114 aa		5.14	□□□□□ -1.59
NR1I3-218	ENST00000503547	IGLV5-37	A0A075B6J1	123 aa		5.13	□□□□□ -1.59
NR1I3-218	ENST00000503547	SPINK8	P0C7L1	97 aa		5.13	□□□□□ -1.59
NR1I3-218	ENST00000503547	SCGB3A1	Q96QR1	104 aa		5.13	□□□□□ -1.59
NR1I3-218	ENST00000503547	TMEM238	C9JI98	176 aa		5.12	□□□□□ -1.59
NR1I3-218	ENST00000503547	ATP5L	O75964	103 aa		5.12	□□□□□ -1.59
NR1I3-218	ENST00000503547	PFN2	P35080	140 aa		5.12	□□□□□ -1.59
NR1I3-218	ENST00000503547	TOMM6	Q96B49	74 aa		5.12	□□□□□ -1.59
NR1I3-218	ENST00000503547	FSIP2	Q5CZC0	6907 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547	TINCR	A0A1B0GVN0	87 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547	MT-ND4L	P03901	98 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547	ERAS	Q7Z444	233 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547	CBLN2	Q8IUK8	224 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547	C3orf22	Q8N5N4	141 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547	LINC00337	Q8N6G1	96 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547	TMEM126A	Q9H061	195 aa		5.11	□□□□□ -1.59
NR1I3-218	ENST00000503547		H3BRM9	83 aa		5.1	□□□□□ -1.59
NR1I3-218	ENST00000503547	ADCYAP1	P18509	176 aa		5.1	□□□□□ -1.59
NR1I3-218	ENST00000503547	LINC01547	P58512	204 aa	Predicted RBP	5.1	□□□□□ -1.59
NR1I3-218	ENST00000503547	HIGD2A	Q9BW72	106 aa		5.1	□□□□□ -1.59
NR1I3-218	ENST00000503547	IGLV5-45	A0A087WSX0	123 aa		5.09	□□□□□ -1.59
NR1I3-218	ENST00000503547	RAB14	P61106	215 aa		5.09	□□□□□ -1.59
NR1I3-218	ENST00000503547	CTAG1A	P78358	180 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms