RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 NIPBLQ6KC79 2804 aaeCLIP-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 CUBNO60494 3623 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 TRANK1O15050 2925 aa-0.41□□□□□ -2.48
CDC42SE2-204ENST00000502639 ZZEF1O43149 2961 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 DNHD1Q96M86 4753 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 PCNX1Q96RV3 2341 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 ARHGEF12Q9NZN5 1544 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 DLEU1O43261 78 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 PIGYQ3MUY2 71 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 C10orf113Q5VZT2 155 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 NXT2Q9NPJ8 142 aaKnown RBP-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 ARL2-SNX15V9GYD0 113 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 VPS13BQ7Z7G8 4022 aa-0.42□□□□□ -2.48
CDC42SE2-204ENST00000502639 TET3O43151 1660 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 HMGXB3Q12766 1538 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 KTN1Q86UP2 1357 aaKnown RBP-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 NAIPQ13075 1403 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 GNG11P61952 73 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 KRTAP19-6Q3LI70 58 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 DEFB123Q8N688 67 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 C1orf54Q8WWF1 131 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 SPG11Q96JI7 2443 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 TNRC18O15417 2968 aaPredicted RBP-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 KALRNO60229 2985 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 SCN7AQ01118 1682 aa-0.43□□□□□ -2.48
CDC42SE2-204ENST00000502639 NALCNQ8IZF0 1738 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 TCHHQ07283 1943 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 RAPGEF6Q8TEU7 1601 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 UBE2L5PA0A1B0GUS4 154 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 LINC00959A0A1B0GUT2 108 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 LOC285095A0A1B0GVY8 99 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 COX6B1P14854 86 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 UBE2L3P68036 154 aaKnown RBP-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 KLK9Q2XQG4 91 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 CELSR3Q9NYQ7 3312 aa-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 GCN1Q92616 2671 aaKnown RBP-0.44□□□□□ -2.48
CDC42SE2-204ENST00000502639 NBASA2RRP1 2371 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 SMG6Q86US8 1419 aaKnown RBP-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 SCAPERQ9BY12 1400 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 MYOM2P54296 1465 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 WDR7Q9Y4E6 1490 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 Q0VG73 95 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 TMEM263Q8WUH6 116 aaKnown RBP-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 LINC01600Q96MT4 127 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 MANBALQ9NQG1 85 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 DNAH9Q9NYC9 4486 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 TULP4Q9NRJ4 1543 aa-0.45□□□□□ -2.48
CDC42SE2-204ENST00000502639 MYO15AQ9UKN7 3530 aa-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 POLA1P09884 1462 aaPredicted RBP-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 SHANK2Q9UPX8 1470 aa-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 MUC17Q685J3 4493 aa-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 LINC00587B1AMM8 73 aa-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 MGPP08493 103 aa-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 UBA52P62987 128 aaKnown RBP-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 KRTAP6-2Q3LI66 62 aa-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 LAMA1P25391 3075 aa-0.46□□□□□ -2.48
CDC42SE2-204ENST00000502639 CEP295Q9C0D2 2601 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 WDFY4Q6ZS81 3184 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 M0R2T5 61 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 SPRR2AP35326 72 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 FDCSPQ8NFU4 85 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 FAM167A-AS1Q96KT0 104 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 FXYD6Q9H0Q3 95 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 UQCR10Q9UDW1 63 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 KNL1Q8NG31 2342 aa-0.47□□□□□ -2.48
CDC42SE2-204ENST00000502639 DMXL1Q9Y485 3027 aa-0.47□□□□□ -2.49
CDC42SE2-204ENST00000502639 TLN1Q9Y490 2541 aaKnown RBP-0.47□□□□□ -2.49
CDC42SE2-204ENST00000502639 ADGRL2O95490 1459 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 EHBP1L1Q8N3D4 1523 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 FAM24AA6NFZ4 105 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 FAM223BA6NKX1 122 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 F6UZH7 168 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 CORTO00230 105 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 SPINK4O60575 86 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 S100A1P23297 94 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 UBE2D3P61077 147 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 UBE2D2P62837 147 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 FAIMQ9NVQ4 179 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 IER3IP1Q9Y5U9 82 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 ANK3Q12955 4377 aaKnown RBP-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 GAPVD1Q14C86 1478 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 IQSEC2Q5JU85 1478 aa-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 MAGI1Q96QZ7 1491 aaPredicted RBP-0.48□□□□□ -2.49
CDC42SE2-204ENST00000502639 DNAH7Q8WXX0 4024 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 RELNP78509 3460 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 EFCAB10A6NFE3 127 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 SPRR2EP22531 72 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 PPP3R1P63098 170 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 CRIPTQ9P021 101 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 CFAP46Q8IYW2 2715 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 DNAH1Q9P2D7 4330 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 C1orf167Q5SNV9 1468 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 DNAH2Q9P225 4427 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 CC2D2AQ9P2K1 1620 aa-0.49□□□□□ -2.49
CDC42SE2-204ENST00000502639 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.5□□□□□ -2.49
CDC42SE2-204ENST00000502639 TRBV7-4A0A0J9YYF1 115 aa-0.5□□□□□ -2.49
CDC42SE2-204ENST00000502639 SNCAP37840 140 aa-0.5□□□□□ -2.49
CDC42SE2-204ENST00000502639 SVBPQ8N300 66 aa-0.5□□□□□ -2.49
CDC42SE2-204ENST00000502639 C2orf88Q9BSF0 95 aa-0.5□□□□□ -2.49
CDC42SE2-204ENST00000502639 CMYA5Q8N3K9 4069 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms