RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 Q6ZR54 194 aa8.93□□□□□ -0.98
SGCA-203ENST00000502555 NTN5Q8WTR8 489 aaPredicted RBP8.93□□□□□ -0.98
SGCA-203ENST00000502555 C2orf48Q96LS8 159 aa8.93□□□□□ -0.98
SGCA-203ENST00000502555 LITAFQ99732 161 aa8.93□□□□□ -0.98
SGCA-203ENST00000502555 PSCAO43653 123 aa8.92□□□□□ -0.98
SGCA-203ENST00000502555 HIGD2BQ4VC39 106 aa8.92□□□□□ -0.98
SGCA-203ENST00000502555 Q6ZVH6 145 aa8.92□□□□□ -0.98
SGCA-203ENST00000502555 HIST1H4GQ99525 98 aa8.92□□□□□ -0.98
SGCA-203ENST00000502555 TENM2Q9NT68 2774 aa8.92□□□□□ -0.98
SGCA-203ENST00000502555 USP17L23D6RBM5 183 aa8.91□□□□□ -0.98
SGCA-203ENST00000502555 SRSF9Q13242 221 aaKnown RBP eCLIP8.91□□□□□ -0.98
SGCA-203ENST00000502555 C2orf82Q6UX34 121 aa8.91□□□□□ -0.98
SGCA-203ENST00000502555 SPANXDQ9BXN6 97 aa8.91□□□□□ -0.98
SGCA-203ENST00000502555 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
SGCA-203ENST00000502555 STARD9Q9P2P6 4700 aa8.91□□□□□ -0.98
SGCA-203ENST00000502555 C6orf223Q8N319 242 aa8.9□□□□□ -0.98
SGCA-203ENST00000502555 ERG28Q9UKR5 140 aa8.9□□□□□ -0.98
SGCA-203ENST00000502555 M0R2N4 97 aa8.89□□□□□ -0.99
SGCA-203ENST00000502555 COX17Q14061 63 aa8.89□□□□□ -0.99
SGCA-203ENST00000502555 BVES-AS1Q5T3Y7 98 aa8.89□□□□□ -0.99
SGCA-203ENST00000502555 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
SGCA-203ENST00000502555 CEND1Q8N111 149 aa8.89□□□□□ -0.99
SGCA-203ENST00000502555 LINC00526Q96FQ7 95 aa8.89□□□□□ -0.99
SGCA-203ENST00000502555 CAMK2N2Q96S95 79 aa8.89□□□□□ -0.99
SGCA-203ENST00000502555 TRBV30A0A0K0K1B3 111 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 SMIM13P0DJ93 91 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 IFITM1P13164 125 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 GCSHP23434 173 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 HINT1P49773 126 aaPredicted RBP8.88□□□□□ -0.99
SGCA-203ENST00000502555 C14orf177Q52M58 125 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 UNQ6190/PRO20217Q6UXQ8 127 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 COPS9Q8WXC6 57 aa8.88□□□□□ -0.99
SGCA-203ENST00000502555 PTTG1IPP53801 180 aa8.87□□□□□ -0.99
SGCA-203ENST00000502555 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
SGCA-203ENST00000502555 SNHG12Q9BXW3 62 aa8.87□□□□□ -0.99
SGCA-203ENST00000502555 PPDPFQ9H3Y8 114 aa8.87□□□□□ -0.99
SGCA-203ENST00000502555 LINC00158P58513 81 aa8.86□□□□□ -0.99
SGCA-203ENST00000502555 SYCNQ0VAF6 134 aa8.86□□□□□ -0.99
SGCA-203ENST00000502555 PLECQ15149 4684 aaKnown RBP8.86□□□□□ -0.99
SGCA-203ENST00000502555 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 TMEM238LA0A1B0GVL6 79 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 A6NJY4 79 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 EREGO14944 169 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 LECT2O14960 151 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 PFN2P35080 140 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 BATFQ16520 125 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 Q6ZRU5 148 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 MIR7-3HGQ8N6C7 128 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 C6orf48Q9UBA6 75 aa8.85□□□□□ -0.99
SGCA-203ENST00000502555 FXYD2P54710 66 aa8.84□□□□□ -0.99
SGCA-203ENST00000502555 RPL24P83731 157 aaKnown RBP8.84□□□□□ -0.99
SGCA-203ENST00000502555 WFDC2Q14508 124 aa8.84□□□□□ -0.99
SGCA-203ENST00000502555 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
SGCA-203ENST00000502555 C1orf134Q5TEV5 83 aa8.84□□□□□ -0.99
SGCA-203ENST00000502555 MUSTN1Q8IVN3 82 aa8.84□□□□□ -0.99
SGCA-203ENST00000502555 DAND5Q8N907 189 aa8.84□□□□□ -0.99
SGCA-203ENST00000502555 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
SGCA-203ENST00000502555 LRCOL1A6NCL2 159 aa8.83□□□□□ -1
SGCA-203ENST00000502555 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
SGCA-203ENST00000502555 A6NDN8 102 aa8.82□□□□□ -1
SGCA-203ENST00000502555 C9orf116Q5BN46 136 aaPredicted RBP8.82□□□□□ -1
SGCA-203ENST00000502555 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
SGCA-203ENST00000502555 LBHQ53QV2 105 aaPredicted RBP8.81□□□□□ -1
SGCA-203ENST00000502555 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.8□□□□□ -1
SGCA-203ENST00000502555 A0A1B0GWB2 263 aa8.8□□□□□ -1
SGCA-203ENST00000502555 A4D1N5 150 aa8.8□□□□□ -1
SGCA-203ENST00000502555 SLPIP03973 132 aa8.8□□□□□ -1
SGCA-203ENST00000502555 COL5A1-AS1Q5SY13 56 aa8.8□□□□□ -1
SGCA-203ENST00000502555 SOSTDC1Q6X4U4 206 aa8.8□□□□□ -1
SGCA-203ENST00000502555 LOC107984156A0A0G2JMH3 177 aa8.8□□□□□ -1
SGCA-203ENST00000502555 LCE6AA0A183 80 aa8.8□□□□□ -1
SGCA-203ENST00000502555 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
SGCA-203ENST00000502555 TLX1NBP0CAT3 122 aa8.8□□□□□ -1
SGCA-203ENST00000502555 NPC2P61916 151 aa8.8□□□□□ -1
SGCA-203ENST00000502555 ARL17AQ8IVW1 177 aa8.8□□□□□ -1
SGCA-203ENST00000502555 NHP2Q9NX24 153 aaKnown RBP8.8□□□□□ -1
SGCA-203ENST00000502555 VPS13DQ5THJ4 4388 aa8.79□□□□□ -1
SGCA-203ENST00000502555 A0A087WTM6 91 aa8.79□□□□□ -1
SGCA-203ENST00000502555 EIF4EBP3O60516 100 aaPredicted RBP8.79□□□□□ -1
SGCA-203ENST00000502555 Q8N814 137 aa8.79□□□□□ -1
SGCA-203ENST00000502555 SND1-IT1Q9HBX3 110 aa8.79□□□□□ -1
SGCA-203ENST00000502555 DNAH1Q9P2D7 4330 aa8.78□□□□□ -1
SGCA-203ENST00000502555 LYSTQ99698 3801 aa8.77□□□□□ -1.01
SGCA-203ENST00000502555 A0A0B4J2C4 111 aa8.77□□□□□ -1.01
SGCA-203ENST00000502555 CFC1BP0CG36 223 aa8.76□□□□□ -1.01
SGCA-203ENST00000502555 CFC1P0CG37 223 aa8.76□□□□□ -1.01
SGCA-203ENST00000502555 PKIGQ9Y2B9 76 aa8.76□□□□□ -1.01
SGCA-203ENST00000502555 ALMS1Q8TCU4 4167 aa8.75□□□□□ -1.01
SGCA-203ENST00000502555 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.75□□□□□ -1.01
SGCA-203ENST00000502555 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
SGCA-203ENST00000502555 K7ERJ3 54 aa8.75□□□□□ -1.01
SGCA-203ENST00000502555 NDUFC2O95298 119 aa8.74□□□□□ -1.01
SGCA-203ENST00000502555 Q6ZRP5 223 aa8.74□□□□□ -1.01
SGCA-203ENST00000502555 RAB37Q96AX2 223 aa8.74□□□□□ -1.01
SGCA-203ENST00000502555 RPL18AQ02543 176 aaKnown RBP8.73□□□□□ -1.01
SGCA-203ENST00000502555 TAX1BP3O14907 124 aa8.72□□□□□ -1.01
SGCA-203ENST00000502555 RTL8CO15255 209 aa8.72□□□□□ -1.01
SGCA-203ENST00000502555 GAGE2EQ4V326 116 aa8.72□□□□□ -1.01
SGCA-203ENST00000502555 C9orf163Q8N9P6 203 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms