RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 NCOA3Q9Y6Q9 1424 aa-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 CUBNO60494 3623 aa-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 MAP1AP78559 2803 aaPredicted RBP-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 SONP18583 2426 aaKnown RBP-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 NKTRP30414 1462 aaKnown RBP-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 MYOM2P54296 1465 aa-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 IQSEC2Q5JU85 1478 aa-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 C1orf167Q5SNV9 1468 aa-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 PLEKHH2Q8IVE3 1493 aa-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 PTPN23Q9H3S7 1636 aa-0.16□□□□□ -2.44
HMGN1P12-201ENST00000499125 ROCK2O75116 1388 aaKnown RBP-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 ZFYVE16Q7Z3T8 1539 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 ARHGEF12Q9NZN5 1544 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 HTTP42858 3142 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 CREBBPQ92793 2442 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 LAMA3Q16787 3333 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 A0A0G2JMZ2 1700 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 UBE2L5PA0A1B0GUS4 154 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 F6UZH7 168 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 M0R2T5 61 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 ABCC5O15440 1437 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 DLEU1O43261 78 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 TGP01266 2768 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 MGPP08493 103 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 IGLC1P0CG04 106 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 ATP5EP56381 51 aaPredicted RBP-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 ADAMTS12P58397 1594 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 UBE2L3P68036 154 aaKnown RBP-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 WHAMMP3Q1A5X7 153 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 SPHKAPQ2M3C7 1700 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 KRTAP19-8Q3LI54 63 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 C10orf113Q5VZT2 155 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 FAM223AQ8IWN6 122 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 NALCNQ8IZF0 1738 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 LINC01600Q96MT4 127 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 C2orf88Q9BSF0 95 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 SCAPERQ9BY12 1400 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 NXT2Q9NPJ8 142 aaKnown RBP-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 NF1P21359 2839 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 PZPP20742 1482 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 EPG5Q9HCE0 2579 aa-0.17□□□□□ -2.44
HMGN1P12-201ENST00000499125 TOPAZ1Q8N9V7 1692 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 ARHGAP5Q13017 1502 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 FAM135AQ9P2D6 1515 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 RELNP78509 3460 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 XRN1Q8IZH2 1706 aaKnown RBP-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 SETBP1Q9Y6X0 1596 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 SETD2Q9BYW2 2564 aaPredicted RBP-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 A0A1B0GV90 55 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 FAM223BA6NKX1 122 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 LINC00587B1AMM8 73 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 TMEM262E9PQX1 116 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 CHKB-CPT1BH3BT56 60 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 H7BZZ5 65 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 CORTO00230 105 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 SPINK4O60575 86 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 COX6CP09669 75 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 SAA2P0DJI9 122 aaPredicted RBP-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 MT4P47944 62 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 Q0VG73 95 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 KRTAP20-2Q3LI61 65 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 C9orf153Q5TBE3 101 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 RPL13AP3Q6NVV1 102 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 DEFB105AQ8NG35 78 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 LCN9Q8WX39 176 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 CACFD1Q9UGQ2 172 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 KNL1Q8NG31 2342 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 NRXN1Q9ULB1 1477 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 LAMA1P25391 3075 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 KDM5AP29375 1690 aaKnown RBP-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 SCN7AQ01118 1682 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 CUL7Q14999 1698 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 KIAA1551Q9HCM1 1747 aa-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 MARF1Q9Y4F3 1742 aaKnown RBP-0.18□□□□□ -2.44
HMGN1P12-201ENST00000499125 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 NBEAL1Q6ZS30 2694 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 EIF4G3O43432 1585 aaKnown RBP-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 SAMD9Q5K651 1589 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 NRKQ7Z2Y5 1582 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 PAPPA2Q9BXP8 1791 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 NBASA2RRP1 2371 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 TARBP1Q13395 1621 aaKnown RBP-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 TNRC18O15417 2968 aaPredicted RBP-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 ZZEF1O43149 2961 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 TSC2P49815 1807 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 PSME4Q14997 1843 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 hADV29S1A0JD25 119 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 NAP1L6A6NFF2 107 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 MPC2O95563 127 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 COX8AP10176 69 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 GNG4P50150 75 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 PPP3R1P63098 170 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 KLK9Q2XQG4 91 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 H1FX-AS1Q4G0G2 97 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 LELP1Q5T871 98 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 C9orf62Q8N4C0 152 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 CGREF1Q99674 301 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 PRO1933Q9H354 126 aa-0.19□□□□□ -2.44
HMGN1P12-201ENST00000499125 UQCR10Q9UDW1 63 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms