RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 LINC00167Q96N53 147 aa8.51□□□□□ -1.05
SEC61A1-207ENST00000498837 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
SEC61A1-207ENST00000498837 CDIP1Q9H305 208 aa8.51□□□□□ -1.05
SEC61A1-207ENST00000498837 S100A8P05109 93 aa8.5□□□□□ -1.05
SEC61A1-207ENST00000498837 ORMDL3Q8N138 153 aa8.5□□□□□ -1.05
SEC61A1-207ENST00000498837 AMELXQ99217 191 aa8.5□□□□□ -1.05
SEC61A1-207ENST00000498837 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
SEC61A1-207ENST00000498837 LOC389332A0A1B0GUA5 103 aa8.49□□□□□ -1.05
SEC61A1-207ENST00000498837 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
SEC61A1-207ENST00000498837 C2orf66Q6UXQ4 117 aa8.48□□□□□ -1.05
SEC61A1-207ENST00000498837 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
SEC61A1-207ENST00000498837 VCX2Q9H322 139 aa8.48□□□□□ -1.05
SEC61A1-207ENST00000498837 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 F8VRH5 84 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 FAM19A3Q7Z5A8 133 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 KRTAP13-1Q8IUC0 172 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 CDKN2A-AS1Q9UH64 79 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 CYSLTR1Q9Y271 337 aa8.47□□□□□ -1.05
SEC61A1-207ENST00000498837 UBE2AP49459 152 aa8.45□□□□□ -1.06
SEC61A1-207ENST00000498837 FAM229BQ4G0N7 80 aa8.45□□□□□ -1.06
SEC61A1-207ENST00000498837 IGIPA6NJ69 53 aa8.44□□□□□ -1.06
SEC61A1-207ENST00000498837 Q8N8P6 123 aa8.44□□□□□ -1.06
SEC61A1-207ENST00000498837 MAP1LC3AQ9H492 121 aa8.44□□□□□ -1.06
SEC61A1-207ENST00000498837 HERVK_113P63121 156 aa8.43□□□□□ -1.06
SEC61A1-207ENST00000498837 PNRC1Q12796 327 aaPredicted RBP8.43□□□□□ -1.06
SEC61A1-207ENST00000498837 ATP5L2Q7Z4Y8 100 aa8.43□□□□□ -1.06
SEC61A1-207ENST00000498837 RAB14P61106 215 aa8.42□□□□□ -1.06
SEC61A1-207ENST00000498837 IFITM2Q01629 132 aa8.42□□□□□ -1.06
SEC61A1-207ENST00000498837 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
SEC61A1-207ENST00000498837 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 SCO1O75880 301 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 NPSP0C0P6 89 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 CXCL5P42830 114 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 ORMDL2Q53FV1 153 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 GEMIN7Q9H840 131 aaKnown RBP8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 LAMTOR2Q9Y2Q5 125 aa8.41□□□□□ -1.06
SEC61A1-207ENST00000498837 IGKV2-28A0A075B6P5 120 aa8.4□□□□□ -1.06
SEC61A1-207ENST00000498837 IGKV2D-28P01615 120 aa8.4□□□□□ -1.06
SEC61A1-207ENST00000498837 RAB5BP61020 215 aa8.4□□□□□ -1.06
SEC61A1-207ENST00000498837 SEC11AP67812 179 aa8.4□□□□□ -1.06
SEC61A1-207ENST00000498837 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.06
SEC61A1-207ENST00000498837 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.06
SEC61A1-207ENST00000498837 SMIM1B2RUZ4 78 aa8.39□□□□□ -1.07
SEC61A1-207ENST00000498837 MT-ND4LP03901 98 aa8.39□□□□□ -1.07
SEC61A1-207ENST00000498837 ADCYAP1P18509 176 aa8.39□□□□□ -1.07
SEC61A1-207ENST00000498837 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
SEC61A1-207ENST00000498837 PRLHP81277 87 aa8.38□□□□□ -1.07
SEC61A1-207ENST00000498837 C3orf22Q8N5N4 141 aa8.38□□□□□ -1.07
SEC61A1-207ENST00000498837 CTAG1AP78358 180 aa8.37□□□□□ -1.07
SEC61A1-207ENST00000498837 PAPPA-AS1Q5QFB9 102 aa8.37□□□□□ -1.07
SEC61A1-207ENST00000498837 K7EMI3 77 aa8.36□□□□□ -1.07
SEC61A1-207ENST00000498837 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
SEC61A1-207ENST00000498837 TIMM17AQ99595 171 aa8.36□□□□□ -1.07
SEC61A1-207ENST00000498837 TMEM218A2RU14 115 aa8.35□□□□□ -1.07
SEC61A1-207ENST00000498837 LCE2DQ5TA82 110 aaPredicted RBP8.35□□□□□ -1.07
SEC61A1-207ENST00000498837 UQCC3Q6UW78 93 aa8.35□□□□□ -1.07
SEC61A1-207ENST00000498837 FAM19A1Q7Z5A9 133 aa8.35□□□□□ -1.07
SEC61A1-207ENST00000498837 TOMM6Q96B49 74 aa8.35□□□□□ -1.07
SEC61A1-207ENST00000498837 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
SEC61A1-207ENST00000498837 PLEKHB2Q96CS7 222 aa8.34□□□□□ -1.07
SEC61A1-207ENST00000498837 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
SEC61A1-207ENST00000498837 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
SEC61A1-207ENST00000498837 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
SEC61A1-207ENST00000498837 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
SEC61A1-207ENST00000498837 KRTAP4-1Q9BYQ7 146 aa8.33□□□□□ -1.08
SEC61A1-207ENST00000498837 TMEM126AQ9H061 195 aa8.33□□□□□ -1.08
SEC61A1-207ENST00000498837 LINC01547P58512 204 aaPredicted RBP8.32□□□□□ -1.08
SEC61A1-207ENST00000498837 ERASQ7Z444 233 aa8.32□□□□□ -1.08
SEC61A1-207ENST00000498837 VPREB1P12018 145 aa8.31□□□□□ -1.08
SEC61A1-207ENST00000498837 SCGB3A1Q96QR1 104 aa8.31□□□□□ -1.08
SEC61A1-207ENST00000498837 M0R378 163 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 G0S2P27469 103 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 PFN2P35080 140 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 CBLN2Q8IUK8 224 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 LINC00337Q8N6G1 96 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 SEC11CQ9BY50 192 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
SEC61A1-207ENST00000498837 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
SEC61A1-207ENST00000498837 FP248Q71RG6 208 aaPredicted RBP8.29□□□□□ -1.08
SEC61A1-207ENST00000498837 ATP5LO75964 103 aa8.28□□□□□ -1.08
SEC61A1-207ENST00000498837 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
SEC61A1-207ENST00000498837 Q8NDZ9 215 aa8.28□□□□□ -1.08
SEC61A1-207ENST00000498837 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
SEC61A1-207ENST00000498837 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
SEC61A1-207ENST00000498837 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
SEC61A1-207ENST00000498837 TRAV9-1A0A075B6T8 112 aa8.27□□□□□ -1.09
SEC61A1-207ENST00000498837 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
SEC61A1-207ENST00000498837 COMMD7Q86VX2 200 aa8.27□□□□□ -1.09
SEC61A1-207ENST00000498837 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
SEC61A1-207ENST00000498837 FSIP2Q5CZC0 6907 aa8.25□□□□□ -1.09
SEC61A1-207ENST00000498837 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
SEC61A1-207ENST00000498837 DAND5Q8N907 189 aa8.25□□□□□ -1.09
SEC61A1-207ENST00000498837 GNB1LQ9BYB4 327 aa8.25□□□□□ -1.09
SEC61A1-207ENST00000498837 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms