RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 EIF5A2Q9GZV4 153 aaKnown RBP8.81□□□□□ -1
HDAC6-236ENST00000498808 F8VRH5 84 aa8.8□□□□□ -1
HDAC6-236ENST00000498808 PRLHP81277 87 aa8.8□□□□□ -1
HDAC6-236ENST00000498808 NAT8BQ9UHF3 227 aa8.8□□□□□ -1
HDAC6-236ENST00000498808 IGLV5-37A0A075B6J1 123 aa8.79□□□□□ -1
HDAC6-236ENST00000498808 FAM74A3Q4VXF1 159 aa8.78□□□□□ -1
HDAC6-236ENST00000498808 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
HDAC6-236ENST00000498808 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
HDAC6-236ENST00000498808 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
HDAC6-236ENST00000498808 SCO1O75880 301 aa8.77□□□□□ -1.01
HDAC6-236ENST00000498808 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
HDAC6-236ENST00000498808 KRTAP19-2Q3LHN2 52 aa8.77□□□□□ -1.01
HDAC6-236ENST00000498808 SLC51BQ86UW2 128 aa8.77□□□□□ -1.01
HDAC6-236ENST00000498808 AMELXQ99217 191 aa8.77□□□□□ -1.01
HDAC6-236ENST00000498808 RAB5AP20339 215 aa8.76□□□□□ -1.01
HDAC6-236ENST00000498808 MT1HP80294 61 aa8.76□□□□□ -1.01
HDAC6-236ENST00000498808 FAM19A3Q7Z5A8 133 aa8.75□□□□□ -1.01
HDAC6-236ENST00000498808 NKAPP1Q8N9T2 125 aa8.75□□□□□ -1.01
HDAC6-236ENST00000498808 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
HDAC6-236ENST00000498808 BATF3Q9NR55 127 aa8.75□□□□□ -1.01
HDAC6-236ENST00000498808 CDKN2A-AS1Q9UH64 79 aa8.75□□□□□ -1.01
HDAC6-236ENST00000498808 A0A1B0GW15 77 aa8.74□□□□□ -1.01
HDAC6-236ENST00000498808 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
HDAC6-236ENST00000498808 C2orf66Q6UXQ4 117 aa8.74□□□□□ -1.01
HDAC6-236ENST00000498808 CXCL5P42830 114 aa8.73□□□□□ -1.01
HDAC6-236ENST00000498808 FAM19A1Q7Z5A9 133 aa8.73□□□□□ -1.01
HDAC6-236ENST00000498808 VCX2Q9H322 139 aa8.73□□□□□ -1.01
HDAC6-236ENST00000498808 TMEM238C9JI98 176 aa8.72□□□□□ -1.01
HDAC6-236ENST00000498808 PPBPP02775 128 aa8.72□□□□□ -1.01
HDAC6-236ENST00000498808 MRPL54Q6P161 138 aaKnown RBP8.72□□□□□ -1.01
HDAC6-236ENST00000498808 TMEM126AQ9H061 195 aa8.72□□□□□ -1.01
HDAC6-236ENST00000498808 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
HDAC6-236ENST00000498808 CFC1BP0CG36 223 aa8.71□□□□□ -1.02
HDAC6-236ENST00000498808 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-236ENST00000498808 BLOC1S1P78537 153 aa8.71□□□□□ -1.02
HDAC6-236ENST00000498808 CYSLTR1Q9Y271 337 aa8.71□□□□□ -1.02
HDAC6-236ENST00000498808 F8W036 122 aa8.7□□□□□ -1.02
HDAC6-236ENST00000498808 SRP19P09132 144 aaKnown RBP8.7□□□□□ -1.02
HDAC6-236ENST00000498808 RPL23P62829 140 aaKnown RBP8.7□□□□□ -1.02
HDAC6-236ENST00000498808 HERVK_113P63121 156 aa8.7□□□□□ -1.02
HDAC6-236ENST00000498808 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
HDAC6-236ENST00000498808 ORMDL3Q8N138 153 aa8.7□□□□□ -1.02
HDAC6-236ENST00000498808 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
HDAC6-236ENST00000498808 RAB5BP61020 215 aa8.69□□□□□ -1.02
HDAC6-236ENST00000498808 TMEM136Q6ZRR5 245 aa8.69□□□□□ -1.02
HDAC6-236ENST00000498808 DAND5Q8N907 189 aa8.69□□□□□ -1.02
HDAC6-236ENST00000498808 LOC389332A0A1B0GUA5 103 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 IGIPA6NJ69 53 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 SMIM1B2RUZ4 78 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 M0R378 163 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 S100A8P05109 93 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 ALKAL2Q6UX46 152 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 CBLN2Q8IUK8 224 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 Q8NBF4 154 aa8.68□□□□□ -1.02
HDAC6-236ENST00000498808 PRSS47A8MTI9 375 aa8.67□□□□□ -1.02
HDAC6-236ENST00000498808 NPSP0C0P6 89 aa8.67□□□□□ -1.02
HDAC6-236ENST00000498808 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-236ENST00000498808 SEC11AP67812 179 aa8.67□□□□□ -1.02
HDAC6-236ENST00000498808 ADIRFQ15847 76 aa8.67□□□□□ -1.02
HDAC6-236ENST00000498808 XP32Q5T750 250 aa8.67□□□□□ -1.02
HDAC6-236ENST00000498808 COX7B2Q8TF08 81 aa8.67□□□□□ -1.02
HDAC6-236ENST00000498808 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
HDAC6-236ENST00000498808 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
HDAC6-236ENST00000498808 HIGD2AQ9BW72 106 aa8.66□□□□□ -1.02
HDAC6-236ENST00000498808 GNB1LQ9BYB4 327 aa8.66□□□□□ -1.02
HDAC6-236ENST00000498808 VPREB1P12018 145 aa8.65□□□□□ -1.02
HDAC6-236ENST00000498808 SPINK1P00995 79 aa8.64□□□□□ -1.03
HDAC6-236ENST00000498808 PDZD11Q5EBL8 140 aa8.64□□□□□ -1.03
HDAC6-236ENST00000498808 A0A1B0GVG6 124 aa8.63□□□□□ -1.03
HDAC6-236ENST00000498808 TCTE3Q8IZS6 198 aa8.63□□□□□ -1.03
HDAC6-236ENST00000498808 Q8N8P6 123 aa8.63□□□□□ -1.03
HDAC6-236ENST00000498808 MAP1LC3AQ9H492 121 aa8.63□□□□□ -1.03
HDAC6-236ENST00000498808 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-236ENST00000498808 ORMDL2Q53FV1 153 aa8.61□□□□□ -1.03
HDAC6-236ENST00000498808 Q8NDZ9 215 aa8.61□□□□□ -1.03
HDAC6-236ENST00000498808 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
HDAC6-236ENST00000498808 LAMTOR2Q9Y2Q5 125 aa8.61□□□□□ -1.03
HDAC6-236ENST00000498808 IGLV5-45A0A087WSX0 123 aa8.6□□□□□ -1.03
HDAC6-236ENST00000498808 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
HDAC6-236ENST00000498808 Q8N377 158 aa8.6□□□□□ -1.03
HDAC6-236ENST00000498808 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
HDAC6-236ENST00000498808 SPINK8P0C7L1 97 aa8.59□□□□□ -1.03
HDAC6-236ENST00000498808 TIMM17AQ99595 171 aa8.59□□□□□ -1.03
HDAC6-236ENST00000498808 C9JQL5 133 aa8.58□□□□□ -1.04
HDAC6-236ENST00000498808 PFN2P35080 140 aa8.58□□□□□ -1.04
HDAC6-236ENST00000498808 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
HDAC6-236ENST00000498808 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
HDAC6-236ENST00000498808 ZNF706Q9Y5V0 76 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-236ENST00000498808 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
HDAC6-236ENST00000498808 K7EMI3 77 aa8.56□□□□□ -1.04
HDAC6-236ENST00000498808 ATP5LO75964 103 aa8.56□□□□□ -1.04
HDAC6-236ENST00000498808 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
HDAC6-236ENST00000498808 FAM19A2Q8N3H0 131 aa8.56□□□□□ -1.04
HDAC6-236ENST00000498808 RAB14P61106 215 aa8.55□□□□□ -1.04
HDAC6-236ENST00000498808 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
HDAC6-236ENST00000498808 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
HDAC6-236ENST00000498808 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
HDAC6-236ENST00000498808 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
HDAC6-236ENST00000498808 SLC25A20O43772 301 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms