RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
CCDC171-209ENST00000498725 IGLV4-3A0A075B6K6 122 aa5.22□□□□□ -1.57
CCDC171-209ENST00000498725 IFI27P40305 119 aaPredicted RBP5.22□□□□□ -1.57
CCDC171-209ENST00000498725 C3orf22Q8N5N4 141 aa5.22□□□□□ -1.57
CCDC171-209ENST00000498725 SMIM7Q9BQ49 75 aa5.22□□□□□ -1.57
CCDC171-209ENST00000498725 C20orf78Q9BR46 151 aa5.22□□□□□ -1.57
CCDC171-209ENST00000498725 TMEM250H0YL14 139 aa5.21□□□□□ -1.58
CCDC171-209ENST00000498725 NPYP01303 97 aa5.21□□□□□ -1.58
CCDC171-209ENST00000498725 RPL32P62910 135 aaKnown RBP5.21□□□□□ -1.58
CCDC171-209ENST00000498725 RGS21Q2M5E4 152 aa5.21□□□□□ -1.58
CCDC171-209ENST00000498725 FAM229BQ4G0N7 80 aa5.21□□□□□ -1.58
CCDC171-209ENST00000498725 ALKBH7Q9BT30 221 aaPredicted RBP5.21□□□□□ -1.58
CCDC171-209ENST00000498725 D6R8Y8 96 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 SCO1O75880 301 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 PRLHP81277 87 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 Q6ZN92 141 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 TEX43Q6ZNM6 134 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 LINC01551Q86U37 167 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 TMEM141Q96I45 108 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 OSTCQ9NRP0 149 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 V9GYV3 84 aa5.2□□□□□ -1.58
CCDC171-209ENST00000498725 TRBV24-1A0A075B6N3 115 aa5.19□□□□□ -1.58
CCDC171-209ENST00000498725 IGKV2-28A0A075B6P5 120 aa5.19□□□□□ -1.58
CCDC171-209ENST00000498725 LINC00862A6NCI5 91 aa5.19□□□□□ -1.58
CCDC171-209ENST00000498725 IGKV2D-28P01615 120 aa5.19□□□□□ -1.58
CCDC171-209ENST00000498725 RAB5AP20339 215 aa5.19□□□□□ -1.58
CCDC171-209ENST00000498725 PNRC1Q12796 327 aaPredicted RBP5.19□□□□□ -1.58
CCDC171-209ENST00000498725 ASB16-AS1Q495Z4 193 aa5.19□□□□□ -1.58
CCDC171-209ENST00000498725 EIF5A2Q9GZV4 153 aaKnown RBP5.19□□□□□ -1.58
CCDC171-209ENST00000498725 NAT8BQ9UHF3 227 aa5.19□□□□□ -1.58
CCDC171-209ENST00000498725 RAB5BP61020 215 aa5.18□□□□□ -1.58
CCDC171-209ENST00000498725 MRPL54Q6P161 138 aaKnown RBP5.18□□□□□ -1.58
CCDC171-209ENST00000498725 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
CCDC171-209ENST00000498725 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
CCDC171-209ENST00000498725 Q8IZM0 81 aa5.18□□□□□ -1.58
CCDC171-209ENST00000498725 NKAPP1Q8N9T2 125 aa5.18□□□□□ -1.58
CCDC171-209ENST00000498725 C2orf88Q9BSF0 95 aa5.18□□□□□ -1.58
CCDC171-209ENST00000498725 LOC389332A0A1B0GUA5 103 aa5.17□□□□□ -1.58
CCDC171-209ENST00000498725 F8VRH5 84 aa5.17□□□□□ -1.58
CCDC171-209ENST00000498725 KRTAP13-3Q3SY46 172 aa5.17□□□□□ -1.58
CCDC171-209ENST00000498725 FAM74A3Q4VXF1 159 aa5.17□□□□□ -1.58
CCDC171-209ENST00000498725 LINC01561Q8N1V8 128 aa5.17□□□□□ -1.58
CCDC171-209ENST00000498725 PYGO1Q9Y3Y4 419 aa5.17□□□□□ -1.58
CCDC171-209ENST00000498725 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
CCDC171-209ENST00000498725 ALKAL2Q6UX46 152 aa5.16□□□□□ -1.58
CCDC171-209ENST00000498725 SLC51BQ86UW2 128 aa5.16□□□□□ -1.58
CCDC171-209ENST00000498725 CDKN2A-AS1Q9UH64 79 aa5.16□□□□□ -1.58
CCDC171-209ENST00000498725 TMEM238C9JI98 176 aa5.15□□□□□ -1.59
CCDC171-209ENST00000498725 BLOC1S1P78537 153 aa5.15□□□□□ -1.59
CCDC171-209ENST00000498725 ADIRFQ15847 76 aa5.15□□□□□ -1.59
CCDC171-209ENST00000498725 DAND5Q8N907 189 aa5.15□□□□□ -1.59
CCDC171-209ENST00000498725 PRELID3AQ96N28 172 aa5.15□□□□□ -1.59
CCDC171-209ENST00000498725 VCX2Q9H322 139 aa5.15□□□□□ -1.59
CCDC171-209ENST00000498725 SMIM27A0A1W2PRY6 76 aa5.14□□□□□ -1.59
CCDC171-209ENST00000498725 F8W036 122 aa5.14□□□□□ -1.59
CCDC171-209ENST00000498725 SRP19P09132 144 aaKnown RBP5.14□□□□□ -1.59
CCDC171-209ENST00000498725 C2orf66Q6UXQ4 117 aa5.14□□□□□ -1.59
CCDC171-209ENST00000498725 FP248Q71RG6 208 aaPredicted RBP5.14□□□□□ -1.59
CCDC171-209ENST00000498725 GEMIN7Q9H840 131 aaKnown RBP5.14□□□□□ -1.59
CCDC171-209ENST00000498725 A0A1B0GW15 77 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 RPL23P62829 140 aaKnown RBP5.13□□□□□ -1.59
CCDC171-209ENST00000498725 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 TMEM136Q6ZRR5 245 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 CBLN2Q8IUK8 224 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 ORMDL3Q8N138 153 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 PLEKHB2Q96CS7 222 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 AMELXQ99217 191 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 HIGD2AQ9BW72 106 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 CYSLTR1Q9Y271 337 aa5.13□□□□□ -1.59
CCDC171-209ENST00000498725 IGLV5-37A0A075B6J1 123 aa5.12□□□□□ -1.59
CCDC171-209ENST00000498725 TMEM238LA0A1B0GVL6 79 aa5.12□□□□□ -1.59
CCDC171-209ENST00000498725 PPBPP02775 128 aa5.12□□□□□ -1.59
CCDC171-209ENST00000498725 HERVK_113P63121 156 aa5.12□□□□□ -1.59
CCDC171-209ENST00000498725 CTAG1AP78358 180 aa5.12□□□□□ -1.59
CCDC171-209ENST00000498725 COX7B2Q8TF08 81 aa5.12□□□□□ -1.59
CCDC171-209ENST00000498725 TMEM126AQ9H061 195 aa5.12□□□□□ -1.59
CCDC171-209ENST00000498725 S100A8P05109 93 aa5.11□□□□□ -1.59
CCDC171-209ENST00000498725 PFN2P35080 140 aa5.11□□□□□ -1.59
CCDC171-209ENST00000498725 CXCL5P42830 114 aa5.11□□□□□ -1.59
CCDC171-209ENST00000498725 Q8NBF4 154 aa5.11□□□□□ -1.59
CCDC171-209ENST00000498725 MAP1LC3AQ9H492 121 aa5.11□□□□□ -1.59
CCDC171-209ENST00000498725 A0A1B0GXF2 115 aa5.1□□□□□ -1.59
CCDC171-209ENST00000498725 SMIM1B2RUZ4 78 aa5.1□□□□□ -1.59
CCDC171-209ENST00000498725 M0R378 163 aa5.09□□□□□ -1.59
CCDC171-209ENST00000498725 SPINK8P0C7L1 97 aa5.09□□□□□ -1.59
CCDC171-209ENST00000498725 SEC11AP67812 179 aa5.09□□□□□ -1.59
CCDC171-209ENST00000498725 MT1HP80294 61 aa5.09□□□□□ -1.59
CCDC171-209ENST00000498725 FAM19A3Q7Z5A8 133 aa5.09□□□□□ -1.59
CCDC171-209ENST00000498725 Q8N8P6 123 aa5.09□□□□□ -1.59
CCDC171-209ENST00000498725 NAT8Q9UHE5 227 aa5.09□□□□□ -1.59
CCDC171-209ENST00000498725 IGIPA6NJ69 53 aa5.08□□□□□ -1.6
CCDC171-209ENST00000498725 RAB14P61106 215 aa5.08□□□□□ -1.6
CCDC171-209ENST00000498725 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
CCDC171-209ENST00000498725 A0A1B0GVG6 124 aa5.07□□□□□ -1.6
CCDC171-209ENST00000498725 VPREB1P12018 145 aa5.07□□□□□ -1.6
CCDC171-209ENST00000498725 ORMDL2Q53FV1 153 aa5.07□□□□□ -1.6
CCDC171-209ENST00000498725 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
CCDC171-209ENST00000498725 NDUFA12Q9UI09 145 aa5.07□□□□□ -1.6
CCDC171-209ENST00000498725 PRSS47A8MTI9 375 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms