RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
FXR1-222ENST00000498658 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
FXR1-222ENST00000498658 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
FXR1-222ENST00000498658 PMVKQ15126 192 aa6.62□□□□□ -1.35
FXR1-222ENST00000498658 C6orf226Q5I0X4 101 aa6.62□□□□□ -1.35
FXR1-222ENST00000498658 Q8IZM0 81 aa6.62□□□□□ -1.35
FXR1-222ENST00000498658 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
FXR1-222ENST00000498658 HBDP02042 147 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 CXCL5P42830 114 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 UNQ6190/PRO20217Q6UXQ8 127 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 LINC00469Q8N7U9 141 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 YPEL4Q96NS1 127 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 CST9LQ9H4G1 147 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 C6orf48Q9UBA6 75 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 CDKN2A-AS1Q9UH64 79 aa6.61□□□□□ -1.35
FXR1-222ENST00000498658 A0A0J9YXV3 536 aa6.6□□□□□ -1.35
FXR1-222ENST00000498658 ATP5LO75964 103 aa6.6□□□□□ -1.35
FXR1-222ENST00000498658 OXTP01178 125 aa6.6□□□□□ -1.35
FXR1-222ENST00000498658 PDZD11Q5EBL8 140 aa6.6□□□□□ -1.35
FXR1-222ENST00000498658 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
FXR1-222ENST00000498658 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
FXR1-222ENST00000498658 IGLV5-45A0A087WSX0 123 aa6.59□□□□□ -1.35
FXR1-222ENST00000498658 NDUFC2-KCTD14E9PQ53 114 aa6.59□□□□□ -1.35
FXR1-222ENST00000498658 H3BRM9 83 aa6.59□□□□□ -1.35
FXR1-222ENST00000498658 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.35
FXR1-222ENST00000498658 Q6ZRP5 223 aa6.59□□□□□ -1.35
FXR1-222ENST00000498658 CHCHD1Q96BP2 118 aaKnown RBP6.59□□□□□ -1.35
FXR1-222ENST00000498658 F8VRH5 84 aa6.58□□□□□ -1.36
FXR1-222ENST00000498658 PRR3P79522 188 aaKnown RBP6.58□□□□□ -1.36
FXR1-222ENST00000498658 C2orf82Q6UX34 121 aa6.58□□□□□ -1.36
FXR1-222ENST00000498658 SLC7A5P1Q8MH63 180 aa6.58□□□□□ -1.36
FXR1-222ENST00000498658 URB1-AS1Q96HZ7 61 aa6.58□□□□□ -1.36
FXR1-222ENST00000498658 A0A096LNJ9 63 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 SMIM1B2RUZ4 78 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 NDUFA6P56556 154 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 GAGE2EQ4V326 116 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 CBLN2Q8IUK8 224 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 GAGE2DQ9UEU5 116 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
FXR1-222ENST00000498658 COX7B2Q8TF08 81 aa6.56□□□□□ -1.36
FXR1-222ENST00000498658 HERC1Q15751 4861 aa6.55□□□□□ -1.36
FXR1-222ENST00000498658 IGLC3P0DOY3 106 aa6.55□□□□□ -1.36
FXR1-222ENST00000498658 HNRNPA3P51991 378 aaKnown RBP6.55□□□□□ -1.36
FXR1-222ENST00000498658 PMCHL1Q16048 86 aa6.55□□□□□ -1.36
FXR1-222ENST00000498658 BAGE3Q86Y29 109 aa6.55□□□□□ -1.36
FXR1-222ENST00000498658 HSBP1O75506 76 aa6.54□□□□□ -1.36
FXR1-222ENST00000498658 TRGC2P03986 189 aa6.54□□□□□ -1.36
FXR1-222ENST00000498658 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
FXR1-222ENST00000498658 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
FXR1-222ENST00000498658 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
FXR1-222ENST00000498658 SPINK8P0C7L1 97 aa6.53□□□□□ -1.36
FXR1-222ENST00000498658 ODF1Q14990 250 aa6.53□□□□□ -1.36
FXR1-222ENST00000498658 SPINK6Q6UWN8 80 aa6.53□□□□□ -1.36
FXR1-222ENST00000498658 TRAV12-1A0A0B4J245 112 aa6.52□□□□□ -1.37
FXR1-222ENST00000498658 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
FXR1-222ENST00000498658 FAM19A5Q7Z5A7 132 aaPredicted RBP6.52□□□□□ -1.37
FXR1-222ENST00000498658 IFI27L1Q96BM0 104 aa6.52□□□□□ -1.37
FXR1-222ENST00000498658 CHTOPQ9Y3Y2 248 aaKnown RBP6.52□□□□□ -1.37
FXR1-222ENST00000498658 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
FXR1-222ENST00000498658 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
FXR1-222ENST00000498658 M0QXV9 152 aa6.51□□□□□ -1.37
FXR1-222ENST00000498658 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
FXR1-222ENST00000498658 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
FXR1-222ENST00000498658 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
FXR1-222ENST00000498658 TMEM170BQ5T4T1 132 aa6.51□□□□□ -1.37
FXR1-222ENST00000498658 REG3GQ6UW15 175 aa6.51□□□□□ -1.37
FXR1-222ENST00000498658 PSORS1C2Q9UIG4 136 aa6.51□□□□□ -1.37
FXR1-222ENST00000498658 COLCA2A8K830 154 aa6.5□□□□□ -1.37
FXR1-222ENST00000498658 UBE2BP63146 152 aa6.5□□□□□ -1.37
FXR1-222ENST00000498658 C1orf137Q5JT78 98 aa6.5□□□□□ -1.37
FXR1-222ENST00000498658 SVIPQ8NHG7 77 aa6.5□□□□□ -1.37
FXR1-222ENST00000498658 C11orf86A6NJI1 115 aa6.49□□□□□ -1.37
FXR1-222ENST00000498658 SRSF9Q13242 221 aaKnown RBP eCLIP6.49□□□□□ -1.37
FXR1-222ENST00000498658 COX17Q14061 63 aa6.49□□□□□ -1.37
FXR1-222ENST00000498658 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
FXR1-222ENST00000498658 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
FXR1-222ENST00000498658 LEPROTL1O95214 131 aa6.48□□□□□ -1.37
FXR1-222ENST00000498658 SERTAD4-AS1Q5TG53 156 aa6.48□□□□□ -1.37
FXR1-222ENST00000498658 FAM19A2Q8N3H0 131 aa6.48□□□□□ -1.37
FXR1-222ENST00000498658 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
FXR1-222ENST00000498658 PLA2G2DQ9UNK4 145 aa6.48□□□□□ -1.37
FXR1-222ENST00000498658 SERF1AO75920 110 aa6.47□□□□□ -1.37
FXR1-222ENST00000498658 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
FXR1-222ENST00000498658 LINC01600Q96MT4 127 aa6.47□□□□□ -1.37
FXR1-222ENST00000498658 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
FXR1-222ENST00000498658 NUPR1O60356 82 aa6.46□□□□□ -1.38
FXR1-222ENST00000498658 IGLV7-43P04211 117 aa6.46□□□□□ -1.38
FXR1-222ENST00000498658 MRPL55Q7Z7F7 128 aaKnown RBP6.46□□□□□ -1.38
FXR1-222ENST00000498658 DIRC1Q969H9 104 aa6.46□□□□□ -1.38
FXR1-222ENST00000498658 TMEM223A0PJW6 202 aa6.45□□□□□ -1.38
FXR1-222ENST00000498658 PLNP26678 52 aa6.45□□□□□ -1.38
FXR1-222ENST00000498658 PFN2P35080 140 aa6.45□□□□□ -1.38
FXR1-222ENST00000498658 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
FXR1-222ENST00000498658 LINC00587B1AMM8 73 aa6.44□□□□□ -1.38
FXR1-222ENST00000498658 RPL24P83731 157 aaKnown RBP6.44□□□□□ -1.38
FXR1-222ENST00000498658 NKAPP1Q8N9T2 125 aa6.44□□□□□ -1.38
FXR1-222ENST00000498658 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
FXR1-222ENST00000498658 H0Y8G0 127 aa6.43□□□□□ -1.38
FXR1-222ENST00000498658 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms