RNA–Protein interactions for RNA: ENST00000498648.5

STRADB-210, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-210ENST00000498648 NOTCH1P46531 2555 aa2.4□□□□□ -2.03
STRADB-210ENST00000498648 EXPH5Q8NEV8 1989 aa2.4□□□□□ -2.03
STRADB-210ENST00000498648 FLNAP21333 2647 aaKnown RBP2.39□□□□□ -2.03
STRADB-210ENST00000498648 TGP01266 2768 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 NSD1Q96L73 2696 aaPredicted RBP2.39□□□□□ -2.03
STRADB-210ENST00000498648 TRBV6-7A0A0A0MS04 114 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 TRBV6-8A0A0A6YYG3 113 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 TRAV17A0A0B4J275 112 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 KANTRA0A1W2PQU2 76 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 CRYM-AS1A6NIL9 109 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 NMBP08949 121 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 UBA52P62987 128 aaKnown RBP2.39□□□□□ -2.03
STRADB-210ENST00000498648 MPV17LQ2QL34 196 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 DEFB109BQ30KR1 87 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 OR2T2Q6IF00 324 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 ALKAL2Q6UX46 152 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.39□□□□□ -2.03
STRADB-210ENST00000498648 LSM10Q969L4 123 aaKnown RBP2.39□□□□□ -2.03
STRADB-210ENST00000498648 SPANXDQ9BXN6 97 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 RPRMQ9NS64 109 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 MED9Q9NWA0 146 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 MED12LQ86YW9 2145 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 MEGF8Q7Z7M0 2845 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 MXRA5Q9NR99 2828 aa2.39□□□□□ -2.03
STRADB-210ENST00000498648 RTTNQ86VV8 2226 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 IGHV3-33P01772 117 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 FXYD4P59646 89 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 CATR1Q13166 79 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 C10orf55Q5SWW7 151 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 DYNLRB2Q8TF09 96 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 AQP10Q96PS8 301 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 REG4Q9BYZ8 158 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 ORMDL1Q9P0S3 153 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 RYR3Q15413 4870 aa2.38□□□□□ -2.03
STRADB-210ENST00000498648 HEATR1Q9H583 2144 aaKnown RBP2.38□□□□□ -2.03
STRADB-210ENST00000498648 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 NCOA6Q14686 2063 aaPredicted RBP2.37□□□□□ -2.03
STRADB-210ENST00000498648 TRAV30A0A087WSZ9 112 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 TRAV2A0A0B4J234 112 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 TMEM218A2RU14 115 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 IQCF6A8MYZ5 107 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 F8W1H4 67 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 PPYP01298 95 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 RNASE3P12724 160 aaKnown RBP2.37□□□□□ -2.03
STRADB-210ENST00000498648 COX7CP15954 63 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 S100A10P60903 97 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 FAM74A1Q5RGS3 127 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 Q6AWC8 147 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 MRPL54Q6P161 138 aaKnown RBP2.37□□□□□ -2.03
STRADB-210ENST00000498648 Q6ZS92 163 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 GTF2H5Q6ZYL4 71 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 CUBNO60494 3623 aa2.37□□□□□ -2.03
STRADB-210ENST00000498648 PIGBOS1A0A0B4J2F0 54 aa2.36□□□□□ -2.03
STRADB-210ENST00000498648 HSD52Q0P140 79 aa2.36□□□□□ -2.03
STRADB-210ENST00000498648 RPL7L1Q6DKI1 246 aaKnown RBP2.36□□□□□ -2.03
STRADB-210ENST00000498648 COA5Q86WW8 74 aa2.36□□□□□ -2.03
STRADB-210ENST00000498648 TMEM242Q9NWH2 141 aa2.36□□□□□ -2.03
STRADB-210ENST00000498648 TLN2Q9Y4G6 2542 aa2.36□□□□□ -2.03
STRADB-210ENST00000498648 CNTRLQ7Z7A1 2325 aa2.36□□□□□ -2.03
STRADB-210ENST00000498648 DOCK10Q96BY6 2186 aa2.36□□□□□ -2.03
STRADB-210ENST00000498648 ESPL1Q14674 2120 aa2.35□□□□□ -2.03
STRADB-210ENST00000498648 TMEM30CPA0ZSE6 113 aa2.35□□□□□ -2.03
STRADB-210ENST00000498648 FAM24AA6NFZ4 105 aa2.35□□□□□ -2.03
STRADB-210ENST00000498648 SLC25A6P12236 298 aa2.35□□□□□ -2.03
STRADB-210ENST00000498648 HMGN3Q15651 99 aa2.35□□□□□ -2.03
STRADB-210ENST00000498648 ZNF818PQ6ZRF7 136 aa2.35□□□□□ -2.03
STRADB-210ENST00000498648 Q6ZRN7 208 aaPredicted RBP2.35□□□□□ -2.03
STRADB-210ENST00000498648 KMT2CQ8NEZ4 4911 aaKnown RBP2.35□□□□□ -2.03
STRADB-210ENST00000498648 M0R143 59 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 IFNA17P01571 189 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 APOC3P02656 99 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 DEFA5Q01523 94 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 NMSQ5H8A3 153 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 SPANXN1Q5VSR9 72 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 LINC00526Q96FQ7 95 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 CACFD1Q9UGQ2 172 aa2.34□□□□□ -2.03
STRADB-210ENST00000498648 ANK2Q01484 3957 aa2.34□□□□□ -2.04
STRADB-210ENST00000498648 PKDREJQ9NTG1 2253 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 OOSP1A8MZH6 123 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 UMAD1C9J7I0 102 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 SSSCA1O60232 199 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 PRH1P02810 166 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 TFF1P04155 84 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 PEA15Q15121 130 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 RHOHQ15669 191 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 C9orf153Q5TBE3 101 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 PSENENQ9NZ42 101 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 NDUFA12Q9UI09 145 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 FREM1Q5H8C1 2179 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 DNAJC13O75165 2243 aa2.33□□□□□ -2.04
STRADB-210ENST00000498648 TNRC6AQ8NDV7 1962 aaKnown RBP2.32□□□□□ -2.04
STRADB-210ENST00000498648 BIRC6Q9NR09 4857 aa2.32□□□□□ -2.04
STRADB-210ENST00000498648 TRBV6-4A0A1B0GX49 114 aa2.32□□□□□ -2.04
STRADB-210ENST00000498648 H3BRM9 83 aa2.32□□□□□ -2.04
STRADB-210ENST00000498648 SNCGO76070 127 aa2.32□□□□□ -2.04
STRADB-210ENST00000498648 IAPPP10997 89 aa2.32□□□□□ -2.04
STRADB-210ENST00000498648 SNCAP37840 140 aa2.32□□□□□ -2.04
STRADB-210ENST00000498648 PKIAP61925 76 aa2.32□□□□□ -2.04
STRADB-210ENST00000498648 KRTAP13-3Q3SY46 172 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms