RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 K7EMI3 77 aa4.26□□□□□ -1.73
PDCD4-211ENST00000498367 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
PDCD4-211ENST00000498367 ARHGAP32A7KAX9 2087 aa4.26□□□□□ -1.73
PDCD4-211ENST00000498367 INTS1Q8N201 2190 aaKnown RBP4.26□□□□□ -1.73
PDCD4-211ENST00000498367 RNASE3P12724 160 aaKnown RBP4.25□□□□□ -1.73
PDCD4-211ENST00000498367 LINC00322Q6ZN03 302 aaPredicted RBP4.25□□□□□ -1.73
PDCD4-211ENST00000498367 J3QRE1 110 aa4.24□□□□□ -1.73
PDCD4-211ENST00000498367 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
PDCD4-211ENST00000498367 GAFA1Q96PS6 74 aa4.24□□□□□ -1.73
PDCD4-211ENST00000498367 RPL37AP61513 92 aaKnown RBP4.23□□□□□ -1.73
PDCD4-211ENST00000498367 DEFB134Q4QY38 66 aa4.23□□□□□ -1.73
PDCD4-211ENST00000498367 CACNA1DQ01668 2161 aa4.23□□□□□ -1.73
PDCD4-211ENST00000498367 DUOX1Q9NRD9 1551 aa4.23□□□□□ -1.73
PDCD4-211ENST00000498367 COL4A5P29400 1685 aa4.22□□□□□ -1.73
PDCD4-211ENST00000498367 ZNF831Q5JPB2 1677 aa4.22□□□□□ -1.73
PDCD4-211ENST00000498367 PRR14LQ5THK1 2151 aa4.21□□□□□ -1.73
PDCD4-211ENST00000498367 COL5A1P20908 1838 aaPredicted RBP4.21□□□□□ -1.74
PDCD4-211ENST00000498367 DNAJC13O75165 2243 aa4.21□□□□□ -1.74
PDCD4-211ENST00000498367 TRGV4A0A0C4DH28 118 aa4.21□□□□□ -1.74
PDCD4-211ENST00000498367 HRES1P13985 223 aa4.21□□□□□ -1.74
PDCD4-211ENST00000498367 DEFB114Q30KQ6 69 aa4.21□□□□□ -1.74
PDCD4-211ENST00000498367 SPINK7P58062 85 aa4.2□□□□□ -1.74
PDCD4-211ENST00000498367 FXYD3Q14802 87 aa4.2□□□□□ -1.74
PDCD4-211ENST00000498367 DEFB112Q30KQ8 113 aa4.2□□□□□ -1.74
PDCD4-211ENST00000498367 TOGARAM1Q9Y4F4 1720 aa4.2□□□□□ -1.74
PDCD4-211ENST00000498367 RP1P56715 2156 aa4.19□□□□□ -1.74
PDCD4-211ENST00000498367 NBDYA0A0U1RRE5 68 aa4.19□□□□□ -1.74
PDCD4-211ENST00000498367 M0R1W7 72 aa4.19□□□□□ -1.74
PDCD4-211ENST00000498367 COX6B1P14854 86 aa4.19□□□□□ -1.74
PDCD4-211ENST00000498367 KRTAP24-1Q3LI83 254 aa4.19□□□□□ -1.74
PDCD4-211ENST00000498367 C10orf55Q5SWW7 151 aa4.19□□□□□ -1.74
PDCD4-211ENST00000498367 A0A087WTM6 91 aa4.18□□□□□ -1.74
PDCD4-211ENST00000498367 IGIPA6NJ69 53 aa4.18□□□□□ -1.74
PDCD4-211ENST00000498367 I3L3M4 83 aa4.18□□□□□ -1.74
PDCD4-211ENST00000498367 FXYD6P3P58550 94 aa4.18□□□□□ -1.74
PDCD4-211ENST00000498367 ARFGEF3Q5TH69 2177 aa4.18□□□□□ -1.74
PDCD4-211ENST00000498367 LMO7Q8WWI1 1683 aa4.17□□□□□ -1.74
PDCD4-211ENST00000498367 A0A0G2JQZ4 141 aa4.17□□□□□ -1.74
PDCD4-211ENST00000498367 IGLV4-60A0A075B6I1 120 aa4.16□□□□□ -1.74
PDCD4-211ENST00000498367 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
PDCD4-211ENST00000498367 NDUFA4O00483 81 aa4.16□□□□□ -1.74
PDCD4-211ENST00000498367 C5orf56Q8N8D9 126 aa4.16□□□□□ -1.74
PDCD4-211ENST00000498367 ZNF625Q96I27 306 aaPredicted RBP4.16□□□□□ -1.74
PDCD4-211ENST00000498367 SPINK4O60575 86 aa4.15□□□□□ -1.75
PDCD4-211ENST00000498367 ARL14EPLP0DKL9 152 aa4.15□□□□□ -1.75
PDCD4-211ENST00000498367 ZNF318Q5VUA4 2279 aa4.15□□□□□ -1.75
PDCD4-211ENST00000498367 LOC110117498A0A087WWA1 95 aa4.14□□□□□ -1.75
PDCD4-211ENST00000498367 H0YGX0 51 aa4.14□□□□□ -1.75
PDCD4-211ENST00000498367 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
PDCD4-211ENST00000498367 MAPK1IP1LQ8NDC0 245 aa4.14□□□□□ -1.75
PDCD4-211ENST00000498367 C4AP0C0L4 1744 aa4.13□□□□□ -1.75
PDCD4-211ENST00000498367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.13□□□□□ -1.75
PDCD4-211ENST00000498367 TRGV1A0A0A0MS02 117 aa4.13□□□□□ -1.75
PDCD4-211ENST00000498367 IGLV3-19P01714 112 aa4.13□□□□□ -1.75
PDCD4-211ENST00000498367 TMEM167BQ9NRX6 74 aa4.13□□□□□ -1.75
PDCD4-211ENST00000498367 TIMM8BQ9Y5J9 83 aaPredicted RBP4.13□□□□□ -1.75
PDCD4-211ENST00000498367 TRGV2A0A075B6R0 118 aa4.12□□□□□ -1.75
PDCD4-211ENST00000498367 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
PDCD4-211ENST00000498367 ABCA4P78363 2273 aa4.12□□□□□ -1.75
PDCD4-211ENST00000498367 UNC13CQ8NB66 2214 aa4.11□□□□□ -1.75
PDCD4-211ENST00000498367 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
PDCD4-211ENST00000498367 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
PDCD4-211ENST00000498367 RPL38P63173 70 aaKnown RBP4.11□□□□□ -1.75
PDCD4-211ENST00000498367 ZFHX3Q15911 3703 aa4.1□□□□□ -1.75
PDCD4-211ENST00000498367 INE1O15225 51 aa4.1□□□□□ -1.75
PDCD4-211ENST00000498367 ACYP2P14621 99 aa4.1□□□□□ -1.75
PDCD4-211ENST00000498367 COA5Q86WW8 74 aa4.1□□□□□ -1.75
PDCD4-211ENST00000498367 Q96NJ1 140 aa4.1□□□□□ -1.75
PDCD4-211ENST00000498367 DOCK10Q96BY6 2186 aa4.1□□□□□ -1.75
PDCD4-211ENST00000498367 A0A087WYN8 130 aa4.09□□□□□ -1.75
PDCD4-211ENST00000498367 A0A1B0GU69 56 aa4.09□□□□□ -1.75
PDCD4-211ENST00000498367 FXYD4P59646 89 aa4.09□□□□□ -1.75
PDCD4-211ENST00000498367 SPACA4Q8TDM5 124 aa4.09□□□□□ -1.75
PDCD4-211ENST00000498367 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.75
PDCD4-211ENST00000498367 IGKV3-15P01624 115 aa4.08□□□□□ -1.76
PDCD4-211ENST00000498367 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
PDCD4-211ENST00000498367 LRRC37A2A6NM11 1700 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 ZFHX2Q9C0A1 2572 aaPredicted RBP4.07□□□□□ -1.76
PDCD4-211ENST00000498367 ETDCA0A1B0GVM5 59 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 M0R2N4 97 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 NCR3O14931 201 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 COX7BP24311 80 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 KRTAP7-1Q8IUC3 87 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 Q8N9L7 120 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 KCNQ1DNQ9H478 68 aa4.07□□□□□ -1.76
PDCD4-211ENST00000498367 IGKV2D-24A0A075B6R9 120 aa4.06□□□□□ -1.76
PDCD4-211ENST00000498367 H3BRN7 92 aa4.06□□□□□ -1.76
PDCD4-211ENST00000498367 MRPL33O75394 65 aaKnown RBP4.06□□□□□ -1.76
PDCD4-211ENST00000498367 NDUFA3O95167 84 aa4.06□□□□□ -1.76
PDCD4-211ENST00000498367 IGLV6-57P01721 117 aa4.06□□□□□ -1.76
PDCD4-211ENST00000498367 HAMPP81172 84 aa4.06□□□□□ -1.76
PDCD4-211ENST00000498367 LINC00304Q8N9R0 145 aa4.05□□□□□ -1.76
PDCD4-211ENST00000498367 KMT2BQ9UMN6 2715 aaPredicted RBP4.04□□□□□ -1.76
PDCD4-211ENST00000498367 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
PDCD4-211ENST00000498367 A0A0G2JMZ2 1700 aa4.04□□□□□ -1.76
PDCD4-211ENST00000498367 LRRC37AA6NMS7 1700 aa4.04□□□□□ -1.76
PDCD4-211ENST00000498367 C4BP0C0L5 1744 aa4.04□□□□□ -1.76
PDCD4-211ENST00000498367 LINC00315P59091 139 aa4.03□□□□□ -1.76
PDCD4-211ENST00000498367 SDK1Q7Z5N4 2213 aa4.03□□□□□ -1.76
PDCD4-211ENST00000498367 BRWD1Q9NSI6 2320 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms