RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
CDK9-205ENST00000498339 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
CDK9-205ENST00000498339 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.34
CDK9-205ENST00000498339 CTAG1AP78358 180 aa6.65□□□□□ -1.34
CDK9-205ENST00000498339 FP248Q71RG6 208 aaPredicted RBP6.65□□□□□ -1.34
CDK9-205ENST00000498339 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.34
CDK9-205ENST00000498339 BATF3Q9NR55 127 aa6.65□□□□□ -1.34
CDK9-205ENST00000498339 A0A1B0GW15 77 aa6.64□□□□□ -1.35
CDK9-205ENST00000498339 F8W036 122 aa6.64□□□□□ -1.35
CDK9-205ENST00000498339 FAM74A3Q4VXF1 159 aa6.64□□□□□ -1.35
CDK9-205ENST00000498339 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
CDK9-205ENST00000498339 FAM19A1Q7Z5A9 133 aa6.64□□□□□ -1.35
CDK9-205ENST00000498339 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
CDK9-205ENST00000498339 VCX2Q9H322 139 aa6.64□□□□□ -1.35
CDK9-205ENST00000498339 S100A8P05109 93 aa6.63□□□□□ -1.35
CDK9-205ENST00000498339 CXCL5P42830 114 aa6.63□□□□□ -1.35
CDK9-205ENST00000498339 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
CDK9-205ENST00000498339 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
CDK9-205ENST00000498339 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
CDK9-205ENST00000498339 BLOC1S1P78537 153 aa6.62□□□□□ -1.35
CDK9-205ENST00000498339 ADIRFQ15847 76 aa6.62□□□□□ -1.35
CDK9-205ENST00000498339 SPAG11AQ6PDA7 123 aa6.62□□□□□ -1.35
CDK9-205ENST00000498339 GEMIN7Q9H840 131 aaKnown RBP6.62□□□□□ -1.35
CDK9-205ENST00000498339 CYSLTR1Q9Y271 337 aa6.62□□□□□ -1.35
CDK9-205ENST00000498339 LOC389332A0A1B0GUA5 103 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 SCO1O75880 301 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 PPBPP02775 128 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 RAB5BP61020 215 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 HERVK_113P63121 156 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 ORMDL3Q8N138 153 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 PRELID3AQ96N28 172 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 CDKN2A-AS1Q9UH64 79 aa6.61□□□□□ -1.35
CDK9-205ENST00000498339 SMIM27A0A1W2PRY6 76 aa6.6□□□□□ -1.35
CDK9-205ENST00000498339 C2orf66Q6UXQ4 117 aa6.6□□□□□ -1.35
CDK9-205ENST00000498339 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
CDK9-205ENST00000498339 SEC11AP67812 179 aa6.59□□□□□ -1.35
CDK9-205ENST00000498339 TMEM136Q6ZRR5 245 aa6.59□□□□□ -1.35
CDK9-205ENST00000498339 AMELXQ99217 191 aa6.59□□□□□ -1.35
CDK9-205ENST00000498339 TMEM238C9JI98 176 aa6.58□□□□□ -1.36
CDK9-205ENST00000498339 RPL23P62829 140 aaKnown RBP6.58□□□□□ -1.36
CDK9-205ENST00000498339 CBLN2Q8IUK8 224 aa6.58□□□□□ -1.36
CDK9-205ENST00000498339 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
CDK9-205ENST00000498339 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
CDK9-205ENST00000498339 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
CDK9-205ENST00000498339 A0A1B0GVG6 124 aa6.57□□□□□ -1.36
CDK9-205ENST00000498339 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
CDK9-205ENST00000498339 COX7B2Q8TF08 81 aa6.57□□□□□ -1.36
CDK9-205ENST00000498339 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
CDK9-205ENST00000498339 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
CDK9-205ENST00000498339 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
CDK9-205ENST00000498339 FAM19A3Q7Z5A8 133 aa6.56□□□□□ -1.36
CDK9-205ENST00000498339 DAND5Q8N907 189 aa6.56□□□□□ -1.36
CDK9-205ENST00000498339 Q8NBF4 154 aa6.56□□□□□ -1.36
CDK9-205ENST00000498339 A0A1B0GXF2 115 aa6.55□□□□□ -1.36
CDK9-205ENST00000498339 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
CDK9-205ENST00000498339 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
CDK9-205ENST00000498339 ORMDL2Q53FV1 153 aa6.55□□□□□ -1.36
CDK9-205ENST00000498339 GNB1LQ9BYB4 327 aa6.55□□□□□ -1.36
CDK9-205ENST00000498339 NPSP0C0P6 89 aa6.54□□□□□ -1.36
CDK9-205ENST00000498339 PFN2P35080 140 aa6.54□□□□□ -1.36
CDK9-205ENST00000498339 TCTE3Q8IZS6 198 aa6.54□□□□□ -1.36
CDK9-205ENST00000498339 Q8N8P6 123 aa6.54□□□□□ -1.36
CDK9-205ENST00000498339 NAT8Q9UHE5 227 aa6.54□□□□□ -1.36
CDK9-205ENST00000498339 IGIPA6NJ69 53 aa6.53□□□□□ -1.36
CDK9-205ENST00000498339 M0R378 163 aa6.53□□□□□ -1.36
CDK9-205ENST00000498339 ATP5LO75964 103 aa6.53□□□□□ -1.36
CDK9-205ENST00000498339 PDZD11Q5EBL8 140 aa6.53□□□□□ -1.36
CDK9-205ENST00000498339 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
CDK9-205ENST00000498339 LAMTOR2Q9Y2Q5 125 aa6.53□□□□□ -1.36
CDK9-205ENST00000498339 ZNF706Q9Y5V0 76 aaPredicted RBP6.53□□□□□ -1.36
CDK9-205ENST00000498339 SPINK8P0C7L1 97 aa6.52□□□□□ -1.37
CDK9-205ENST00000498339 SPINK1P00995 79 aa6.51□□□□□ -1.37
CDK9-205ENST00000498339 MT1HP80294 61 aa6.51□□□□□ -1.37
CDK9-205ENST00000498339 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
CDK9-205ENST00000498339 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
CDK9-205ENST00000498339 ATP5L2Q7Z4Y8 100 aa6.51□□□□□ -1.37
CDK9-205ENST00000498339 FAM19A2Q8N3H0 131 aa6.51□□□□□ -1.37
CDK9-205ENST00000498339 PRSS47A8MTI9 375 aa6.5□□□□□ -1.37
CDK9-205ENST00000498339 VPREB1P12018 145 aa6.5□□□□□ -1.37
CDK9-205ENST00000498339 RAB14P61106 215 aa6.5□□□□□ -1.37
CDK9-205ENST00000498339 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
CDK9-205ENST00000498339 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
CDK9-205ENST00000498339 K7EMI3 77 aa6.49□□□□□ -1.37
CDK9-205ENST00000498339 G0S2P27469 103 aa6.49□□□□□ -1.37
CDK9-205ENST00000498339 XP32Q5T750 250 aa6.48□□□□□ -1.37
CDK9-205ENST00000498339 SCGB3A1Q96QR1 104 aa6.48□□□□□ -1.37
CDK9-205ENST00000498339 SND1-IT1Q9HBX3 110 aa6.48□□□□□ -1.37
CDK9-205ENST00000498339 AKAP14Q86UN6 197 aa6.47□□□□□ -1.37
CDK9-205ENST00000498339 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
CDK9-205ENST00000498339 NXT2Q9NPJ8 142 aaKnown RBP6.47□□□□□ -1.37
CDK9-205ENST00000498339 IGLV5-45A0A087WSX0 123 aa6.46□□□□□ -1.38
CDK9-205ENST00000498339 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
CDK9-205ENST00000498339 H3BRM9 83 aa6.46□□□□□ -1.38
CDK9-205ENST00000498339 M0R2T5 61 aa6.46□□□□□ -1.38
CDK9-205ENST00000498339 ERG28Q9UKR5 140 aa6.46□□□□□ -1.38
CDK9-205ENST00000498339 C9JQL5 133 aa6.45□□□□□ -1.38
CDK9-205ENST00000498339 MOBPQ13875 183 aa6.45□□□□□ -1.38
CDK9-205ENST00000498339 ERASQ7Z444 233 aa6.45□□□□□ -1.38
CDK9-205ENST00000498339 Q8N377 158 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms