RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TRBV6-8A0A0A6YYG3 113 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 E9PLD3 99 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 H3BNG1 76 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 LINC00694P0DN24 101 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 HTN3P15516 51 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 NMUP48645 174 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 HERVK_113P61574 105 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 RPL24P83731 157 aaKnown RBP3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 C12orf74Q32Q52 190 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 ZC2HC1BQ5TFG8 222 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 LYRM7Q5U5X0 104 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 NTM-AS1Q6ZSK4 140 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 CEND1Q8N111 149 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 C11orf45Q8TAV5 145 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 AMELXQ99217 191 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 TM2D3Q9BRN9 247 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 CHAC1Q9BUX1 264 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 RETNQ9HD89 108 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 ICOSQ9Y6W8 199 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
HMGXB4-208ENST00000498325 A0A0J9YWU9 116 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 A0A0J9YY99 117 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 A0A1B0GWB2 263 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 C11orf86A6NJI1 115 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 TMEM262E9PQX1 116 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 TMEM170BQ5T4T1 132 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 NFE4Q86UQ8 179 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 PCP2Q8IVA1 136 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 CHCHD5Q9BSY4 110 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 TP73-AS1Q9UF72 201 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
HMGXB4-208ENST00000498325 FAT2Q9NYQ8 4349 aa3.65□□□□□ -1.82
HMGXB4-208ENST00000498325 IGLV4-69A0A075B6H9 119 aa3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 A0A0J9YXV3 536 aa3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 TINCRA0A1B0GVN0 87 aa3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 IGLL5B9A064 214 aa3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 GAGE6Q13070 117 aa3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 CEMP1Q6PRD7 247 aaPredicted RBP3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 GEMIN7Q9H840 131 aaKnown RBP3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 CDC42SE2Q9NRR3 84 aa3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 SPANXB1Q9NS25 103 aaPredicted RBP3.65□□□□□ -1.83
HMGXB4-208ENST00000498325 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 DEFB131BA0A096LNP1 70 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 A0A096LPF7 62 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 TRAV10A0A0B4J240 114 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 LY6G6CO95867 125 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 UBE2D1P51668 147 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 FXYD2P54710 66 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 TCTAP57738 103 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 HERVK_113P63121 156 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 Q6ZUT4 128 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 NHP2Q9NX24 153 aaKnown RBP3.64□□□□□ -1.83
HMGXB4-208ENST00000498325 TMEM223A0PJW6 202 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 H3BMG7 143 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 M0QXV9 152 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 PRYO14603 147 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 LEPROTO15243 131 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 ZNF22P17026 224 aaPredicted RBP3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 RNASE13Q5GAN3 156 aaKnown RBP3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 LELP1Q5T871 98 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 LYPD5Q6UWN5 251 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 FAM104AQ969W3 186 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 PLEKHB2Q96CS7 222 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 HIST1H4GQ99525 98 aa3.63□□□□□ -1.83
HMGXB4-208ENST00000498325 IGLV4-60A0A075B6I1 120 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 TRBV20-1A0A075B6N2 111 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 TRAV13-1A0A0B4J241 112 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 MYMXA0A1B0GTQ4 84 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 LGALS3P17931 250 aaKnown RBP3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 WFDC2Q14508 124 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 SS18Q15532 418 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 C15orf53Q8NAA6 179 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 NAA38Q9BRA0 125 aaKnown RBP3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
HMGXB4-208ENST00000498325 HMCN2Q8NDA2 5059 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 IGLV5-45A0A087WSX0 123 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 IGHV1-58A0A0C4DH39 117 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 ZNF815PA8K554 130 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 J3QQQ9 107 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 APOMO95445 188 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 CKS1BP61024 79 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 LINC00242Q5T6M2 205 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 SCGB1D4Q6XE38 83 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 PPDPFLQ8WWR9 84 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 CDKN2A-AS1Q9UH64 79 aa3.61□□□□□ -1.83
HMGXB4-208ENST00000498325 IGKV3OR2-268A0A0C4DH90 116 aa3.6□□□□□ -1.83
HMGXB4-208ENST00000498325 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
HMGXB4-208ENST00000498325 K7ERJ3 54 aa3.6□□□□□ -1.83
HMGXB4-208ENST00000498325 ANGP03950 147 aaKnown RBP3.6□□□□□ -1.83
HMGXB4-208ENST00000498325 SPINK8P0C7L1 97 aa3.6□□□□□ -1.83
HMGXB4-208ENST00000498325 IGHV3-30-3P0DP02 117 aa3.6□□□□□ -1.83
HMGXB4-208ENST00000498325 COX6A2Q02221 97 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms