RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ACYP1P07311 99 aa8.72□□□□□ -1.01
AFF3-215ENST00000498090 LINC00612Q8N6U2 182 aa8.72□□□□□ -1.01
AFF3-215ENST00000498090 NOTCH1P46531 2555 aa8.71□□□□□ -1.01
AFF3-215ENST00000498090 SOSTDC1Q6X4U4 206 aa8.71□□□□□ -1.02
AFF3-215ENST00000498090 TRAV26-1A0A087WT03 109 aa8.7□□□□□ -1.02
AFF3-215ENST00000498090 IBA57-AS1B1ANH7 110 aa8.7□□□□□ -1.02
AFF3-215ENST00000498090 A0A087WZ39 114 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 IGHV3OR16-9A0A0B4J2B5 98 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
AFF3-215ENST00000498090 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 GAGE6Q13070 117 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 KPRPQ5T749 579 aaPredicted RBP8.69□□□□□ -1.02
AFF3-215ENST00000498090 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 LOC100131303A0A0U1RQF7 123 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 CRPP02741 224 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 IGHV4-30-4P0DP06 118 aa8.69□□□□□ -1.02
AFF3-215ENST00000498090 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
AFF3-215ENST00000498090 PRB2P02812 416 aaPredicted RBP8.68□□□□□ -1.02
AFF3-215ENST00000498090 A0A0U1RRA0 63 aa8.67□□□□□ -1.02
AFF3-215ENST00000498090 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
AFF3-215ENST00000498090 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
AFF3-215ENST00000498090 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
AFF3-215ENST00000498090 ANAPC13Q9BS18 74 aa8.65□□□□□ -1.02
AFF3-215ENST00000498090 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.03
AFF3-215ENST00000498090 LYRM9A8MSI8 78 aa8.65□□□□□ -1.03
AFF3-215ENST00000498090 H0YGX0 51 aa8.65□□□□□ -1.03
AFF3-215ENST00000498090 LINC00158P58513 81 aa8.65□□□□□ -1.03
AFF3-215ENST00000498090 SS18Q15532 418 aa8.65□□□□□ -1.03
AFF3-215ENST00000498090 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.03
AFF3-215ENST00000498090 PRO0255Q9UI72 69 aa8.65□□□□□ -1.03
AFF3-215ENST00000498090 INAFM2P0DMQ5 153 aa8.64□□□□□ -1.03
AFF3-215ENST00000498090 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
AFF3-215ENST00000498090 K7EIL1 84 aa8.63□□□□□ -1.03
AFF3-215ENST00000498090 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
AFF3-215ENST00000498090 BAALC-AS2P0C853 105 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 DEFB130BP0DP73 79 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 DEFB130AP0DP74 79 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 GYPEP15421 78 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 Q8IZM0 81 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 APOC4P55056 127 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 IMUPQ9GZP8 106 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 X6R8D5 127 aa8.62□□□□□ -1.03
AFF3-215ENST00000498090 IGKV2-28A0A075B6P5 120 aa8.61□□□□□ -1.03
AFF3-215ENST00000498090 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
AFF3-215ENST00000498090 IGKV2D-28P01615 120 aa8.61□□□□□ -1.03
AFF3-215ENST00000498090 CXCL5P42830 114 aa8.61□□□□□ -1.03
AFF3-215ENST00000498090 NDUFV3P56181 108 aaKnown RBP8.61□□□□□ -1.03
AFF3-215ENST00000498090 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
AFF3-215ENST00000498090 TRBV7-7A0A0K0K1E9 115 aa8.6□□□□□ -1.03
AFF3-215ENST00000498090 CCL18P55774 89 aa8.6□□□□□ -1.03
AFF3-215ENST00000498090 DEFB135Q30KP9 77 aa8.6□□□□□ -1.03
AFF3-215ENST00000498090 LINC00337Q8N6G1 96 aa8.6□□□□□ -1.03
AFF3-215ENST00000498090 DNAL4O96015 105 aa8.59□□□□□ -1.03
AFF3-215ENST00000498090 C5orf38Q86SI9 138 aa8.59□□□□□ -1.03
AFF3-215ENST00000498090 COX17Q14061 63 aa8.59□□□□□ -1.03
AFF3-215ENST00000498090 PAX4O43316 350 aa8.58□□□□□ -1.04
AFF3-215ENST00000498090 MALP21145 153 aa8.58□□□□□ -1.04
AFF3-215ENST00000498090 SMIM11BQ8TCY0 68 aa8.58□□□□□ -1.04
AFF3-215ENST00000498090 PRKDCP78527 4128 aaKnown RBP8.57□□□□□ -1.04
AFF3-215ENST00000498090 LINC00643Q86TS7 51 aa8.57□□□□□ -1.04
AFF3-215ENST00000498090 MUC7Q8TAX7 377 aa8.57□□□□□ -1.04
AFF3-215ENST00000498090 FAM218AQ96MZ4 157 aa8.57□□□□□ -1.04
AFF3-215ENST00000498090 RETNQ9HD89 108 aa8.57□□□□□ -1.04
AFF3-215ENST00000498090 A0A1B0GX51 115 aa8.56□□□□□ -1.04
AFF3-215ENST00000498090 NDUFC2O95298 119 aa8.56□□□□□ -1.04
AFF3-215ENST00000498090 CD164L2Q6UWJ8 174 aa8.56□□□□□ -1.04
AFF3-215ENST00000498090 SDIM1Q6ZPB5 146 aa8.56□□□□□ -1.04
AFF3-215ENST00000498090 PFN2P35080 140 aa8.56□□□□□ -1.04
AFF3-215ENST00000498090 XCL1P47992 114 aa8.56□□□□□ -1.04
AFF3-215ENST00000498090 IGHV4-28A0A0C4DH34 117 aa8.54□□□□□ -1.04
AFF3-215ENST00000498090 NHLRC4P0CG21 123 aaPredicted RBP8.54□□□□□ -1.04
AFF3-215ENST00000498090 C4orf48Q5BLP8 95 aa8.54□□□□□ -1.04
AFF3-215ENST00000498090 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
AFF3-215ENST00000498090 MIFP14174 115 aa8.53□□□□□ -1.04
AFF3-215ENST00000498090 Q8NAQ8 132 aa8.53□□□□□ -1.04
AFF3-215ENST00000498090 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
AFF3-215ENST00000498090 ATP5G1P05496 136 aa8.53□□□□□ -1.04
AFF3-215ENST00000498090 OR13C6PQ8NH95 151 aa8.53□□□□□ -1.04
AFF3-215ENST00000498090 MRAPQ8TCY5 172 aa8.53□□□□□ -1.04
AFF3-215ENST00000498090 OBSCN-AS1Q96MR7 158 aa8.53□□□□□ -1.04
AFF3-215ENST00000498090 HUWE1Q7Z6Z7 4374 aaKnown RBP8.52□□□□□ -1.05
AFF3-215ENST00000498090 DAD1P61803 113 aa8.52□□□□□ -1.05
AFF3-215ENST00000498090 Q9HAA7 133 aa8.52□□□□□ -1.05
AFF3-215ENST00000498090 DNAH9Q9NYC9 4486 aa8.51□□□□□ -1.05
AFF3-215ENST00000498090 TGP01266 2768 aa8.51□□□□□ -1.05
AFF3-215ENST00000498090 A0A087WYN8 130 aa8.51□□□□□ -1.05
AFF3-215ENST00000498090 LINC00269Q8N2A0 174 aa8.51□□□□□ -1.05
AFF3-215ENST00000498090 CHCHD10Q8WYQ3 142 aaPredicted RBP8.51□□□□□ -1.05
AFF3-215ENST00000498090 DEFB4AO15263 64 aa8.5□□□□□ -1.05
AFF3-215ENST00000498090 REG3AQ06141 175 aa8.5□□□□□ -1.05
AFF3-215ENST00000498090 KIAA0087Q14695 138 aa8.5□□□□□ -1.05
AFF3-215ENST00000498090 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
AFF3-215ENST00000498090 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
AFF3-215ENST00000498090 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
AFF3-215ENST00000498090 SPART-AS1P0CW21 52 aa8.49□□□□□ -1.05
AFF3-215ENST00000498090 LINC00167Q96N53 147 aa8.49□□□□□ -1.05
AFF3-215ENST00000498090 LECT2O14960 151 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms