RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 ICOSQ9Y6W8 199 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 STARD9Q9P2P6 4700 aa1.29□□□□□ -2.2
CBX3-208ENST00000497498 TRBV20OR9-2A0A075B6H5 130 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 TRBV7-3A0A075B6L6 115 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 TRAV12-1A0A0B4J245 112 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 IGHV1-58A0A0C4DH39 117 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 A0A0J9YW62 118 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 TRBV30A0A0K0K1B3 111 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 TRBV6-1A0A0K0K1D8 114 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 A0A1B0GUT8 65 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 A6NED7 52 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 HIGD1CA8MV81 97 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 OOSP1A8MZH6 123 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 LY6LH3BQJ8 138 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 UPK2O00526 184 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 EPPINO95925 133 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 ARL14EPLP0DKL9 152 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 HRES1P13985 223 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 SLC25A16P16260 332 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 FKBP2P26885 142 aaKnown RBP1.28□□□□□ -2.2
CBX3-208ENST00000497498 CKS2P33552 79 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 IFI27P40305 119 aaPredicted RBP1.28□□□□□ -2.2
CBX3-208ENST00000497498 INSL3P51460 131 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 DSCR4P56555 118 aaPredicted RBP1.28□□□□□ -2.2
CBX3-208ENST00000497498 FXYD4P59646 89 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 DAD1P61803 113 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 HIST1H4AP62805 103 aaKnown RBP1.28□□□□□ -2.2
CBX3-208ENST00000497498 ZNF56Q15929 161 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 TMEM155Q4W5P6 130 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 SPANXN5Q5MJ07 72 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 MIC13Q5XKP0 118 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 LINC00305Q7Z4B0 112 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 C5orf38Q86SI9 138 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 MARCH3Q86UD3 253 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 NDUFA11Q86Y39 141 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 PFN4Q8NHR9 129 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 BRK1Q8WUW1 75 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 ODF3Q96PU9 254 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 TTTY10Q9BZA0 68 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 C11orf68Q9H3H3 251 aaKnown RBP1.28□□□□□ -2.2
CBX3-208ENST00000497498 TAC3Q9UHF0 121 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 PRO1854Q9UHT4 67 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 RPUSD1Q9UJJ7 312 aaKnown RBP1.28□□□□□ -2.2
CBX3-208ENST00000497498 R4GN34 69 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 DNAH11Q96DT5 4516 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 PLXNB1O43157 2135 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 NUMA1Q14980 2115 aa1.28□□□□□ -2.2
CBX3-208ENST00000497498 FLG2Q5D862 2391 aaPredicted RBP1.28□□□□□ -2.2
CBX3-208ENST00000497498 ANAPC1Q9H1A4 1944 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 TRBV10-3A0A0K0K1G6 114 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 LINC01546A6NGU7 62 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 C19orf84I3L1E1 186 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 CCL22O00626 93 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 COX7A2P2O60397 106 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 PGLYRP1O75594 196 aaPredicted RBP1.27□□□□□ -2.21
CBX3-208ENST00000497498 IGLV3-27P01718 113 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 IGLV6-57P01721 117 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 PIRTP0C851 137 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 IAPPP10997 89 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 NPPCP23582 126 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 FCER1GP30273 86 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 UBE2BP63146 152 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 KISS1Q15726 138 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 DEFB109BQ30KR1 87 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 FBXL19-AS1Q494R0 122 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 Q6JHZ5 121 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 C2orf82Q6UX34 121 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 SDIM1Q6ZPB5 146 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 SPTSSAQ969W0 71 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 WFDC6Q9BQY6 131 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 DPH3P1Q9H4G8 78 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 OTORQ9NRC9 128 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 LHFPL6Q9Y693 200 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 VPS13DQ5THJ4 4388 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 DNAH6Q9C0G6 4158 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 MED12LQ86YW9 2145 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 MDC1Q14676 2089 aaKnown RBP1.27□□□□□ -2.21
CBX3-208ENST00000497498 TRPM6Q9BX84 2022 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 DOCK4Q8N1I0 1966 aa1.27□□□□□ -2.21
CBX3-208ENST00000497498 ALMS1Q8TCU4 4167 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 WNK2Q9Y3S1 2297 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 FREM1Q5H8C1 2179 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 TRAV7A0A075B6U4 112 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 TRAV13-2A0A0B4J235 113 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 TRBV27A0A0K0K1C4 114 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 A0A1W2PQD3 144 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 C19orf71A6NCJ1 209 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 SDHAF1A6NFY7 115 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 F8VRH5 84 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 K7ERJ3 54 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 M0R135 149 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 SH2D1AO60880 128 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 ERC2-IT1O76042 136 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 TCL1BO95988 128 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 DNAL4O96015 105 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 IGKV1D-33P01593 117 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 IGKV1-33P01594 117 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 SPINT3P49223 89 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 EDDM3BP56851 147 aa1.26□□□□□ -2.21
CBX3-208ENST00000497498 FGF12P61328 243 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms