RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 LINC00477Q96M19 166 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 AMELXQ99217 191 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 UPK3BQ9BT76 320 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 WFDC10AQ9H1F0 79 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 DPH3P1Q9H4G8 78 aa4.74□□□□□ -1.65
HOXA9-206ENST00000497089 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 IGKV2-40A0A087WW87 121 aaPredicted RBP4.73□□□□□ -1.65
HOXA9-206ENST00000497089 IGHV3-35A0A0C4DH35 117 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 EPM2AB3EWF7 344 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 IGKV2D-40P01614 121 aaPredicted RBP4.73□□□□□ -1.65
HOXA9-206ENST00000497089 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 ZNF80P51504 273 aaPredicted RBP4.73□□□□□ -1.65
HOXA9-206ENST00000497089 HUWE1Q7Z6Z7 4374 aaKnown RBP4.73□□□□□ -1.65
HOXA9-206ENST00000497089 FAM19A4Q96LR4 140 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 C17orf77Q96MU5 243 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 DSCR8Q96T75 97 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 OVOL2Q9BRP0 275 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 TIMM21Q9BVV7 248 aa4.73□□□□□ -1.65
HOXA9-206ENST00000497089 AGRNO00468 2067 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 IGHV3-21A0A0B4J1V1 117 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 IGHV7-4-1A0A0J9YVY3 117 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 A0A0J9YXY3 114 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 BCE1O60756 84 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 TIMM17BO60830 172 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 IGKV1-17P01599 117 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 TSPEAR-AS2P59090 65 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 ZNF876PQ49A33 203 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 S100A7L2Q5SY68 101 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 C1orf195Q5TG92 126 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 ATP5EP2Q5VTU8 51 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 VSIG2Q96IQ7 327 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 RETNQ9HD89 108 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 TP53TG1Q9Y2A0 90 aa4.72□□□□□ -1.65
HOXA9-206ENST00000497089 TRAV8-3A0A0A6YYJ7 113 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 LCE6AA0A183 80 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 IGIPA6NJ69 53 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 BUB3O43684 328 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 OXTP01178 125 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 CMC4P56277 68 aaPredicted RBP4.71□□□□□ -1.66
HOXA9-206ENST00000497089 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
HOXA9-206ENST00000497089 MIAQ16674 131 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 SMCR5Q8TEV8 140 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 RHPN1-AS1Q9BWJ2 59 aa4.71□□□□□ -1.66
HOXA9-206ENST00000497089 TRAV26-2A0A0B4J265 109 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 KNCNA6PVL3 124 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 I3L3M4 83 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 COX7A2LO14548 114 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 RPL35AP18077 110 aaKnown RBP4.7□□□□□ -1.66
HOXA9-206ENST00000497089 APOC4P55056 127 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 RHOHQ15669 191 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 RNF182Q8N6D2 247 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 C14orf178Q8N769 122 aaPredicted RBP4.7□□□□□ -1.66
HOXA9-206ENST00000497089 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 Q8TAT8 98 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 LENEPQ9Y5L5 61 aa4.7□□□□□ -1.66
HOXA9-206ENST00000497089 IGHV3OR16-8A0A075B7F1 116 aa4.69□□□□□ -1.66
HOXA9-206ENST00000497089 IGKV3D-20A0A0C4DH25 116 aa4.69□□□□□ -1.66
HOXA9-206ENST00000497089 DNAL4O96015 105 aa4.69□□□□□ -1.66
HOXA9-206ENST00000497089 PRSS2P07478 247 aa4.68□□□□□ -1.66
HOXA9-206ENST00000497089 RBMY1A1P0DJD3 496 aaKnown RBP4.68□□□□□ -1.66
HOXA9-206ENST00000497089 RBMY1CP0DJD4 496 aa4.68□□□□□ -1.66
HOXA9-206ENST00000497089 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
HOXA9-206ENST00000497089 RBMY1FQ15415 496 aaKnown RBP4.68□□□□□ -1.66
HOXA9-206ENST00000497089 CLEC2BQ92478 149 aa4.68□□□□□ -1.66
HOXA9-206ENST00000497089 LAMTOR3Q9UHA4 124 aa4.68□□□□□ -1.66
HOXA9-206ENST00000497089 RYR3Q15413 4870 aa4.68□□□□□ -1.66
HOXA9-206ENST00000497089 IGHV3OR16-13A0A075B7E8 117 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 IGHV3-49A0A0A0MS15 119 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 IGHV3-74A0A0B4J1X5 117 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 TSHBP01222 138 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 MGPP08493 103 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 BAALC-AS2P0C853 105 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 DAZ2Q13117 558 aaKnown RBP4.67□□□□□ -1.66
HOXA9-206ENST00000497089 FAM19A1Q7Z5A9 133 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 DAZ4Q86SG3 579 aaKnown RBP4.67□□□□□ -1.66
HOXA9-206ENST00000497089 DAZ3Q9NR90 486 aaKnown RBP4.67□□□□□ -1.66
HOXA9-206ENST00000497089 PKIGQ9Y2B9 76 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 CSMD3Q7Z407 3707 aa4.67□□□□□ -1.66
HOXA9-206ENST00000497089 TRBV6-5A0A0K0K1A5 114 aa4.66□□□□□ -1.66
HOXA9-206ENST00000497089 K7EQG2 157 aa4.66□□□□□ -1.66
HOXA9-206ENST00000497089 NDUFC1O43677 76 aa4.66□□□□□ -1.66
HOXA9-206ENST00000497089 CIRBPQ14011 172 aaKnown RBP4.66□□□□□ -1.66
HOXA9-206ENST00000497089 DEFB135Q30KP9 77 aa4.66□□□□□ -1.66
HOXA9-206ENST00000497089 C9orf47Q6ZRZ4 202 aa4.66□□□□□ -1.66
HOXA9-206ENST00000497089 LITAFQ99732 161 aa4.66□□□□□ -1.66
HOXA9-206ENST00000497089 PHLDA3Q9Y5J5 127 aa4.66□□□□□ -1.66
HOXA9-206ENST00000497089 TRAV21A0A0B4J279 112 aa4.65□□□□□ -1.66
HOXA9-206ENST00000497089 TRBV10-3A0A0K0K1G6 114 aa4.65□□□□□ -1.66
HOXA9-206ENST00000497089 NXPH4O95158 308 aa4.65□□□□□ -1.66
HOXA9-206ENST00000497089 S100A4P26447 101 aaKnown RBP4.65□□□□□ -1.66
HOXA9-206ENST00000497089 POLR2KP53803 58 aaKnown RBP4.65□□□□□ -1.66
HOXA9-206ENST00000497089 RPL39LQ96EH5 51 aaKnown RBP4.65□□□□□ -1.66
HOXA9-206ENST00000497089 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.66
HOXA9-206ENST00000497089 IGKV3-7A0A075B6H7 116 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 IGHV3-66A0A0C4DH42 116 aa4.65□□□□□ -1.67
HOXA9-206ENST00000497089 A0A0J9YWU9 116 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms