RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 OPRPNQ99935 248 aaPredicted RBP4□□□□□ -1.77
HMGCL-206ENST00000496907 MAP1LC3CQ9BXW4 147 aa4□□□□□ -1.77
HMGCL-206ENST00000496907 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
HMGCL-206ENST00000496907 IGHV3-64A0A075B6Q5 118 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 GVQW2A0A096LPI5 108 aaPredicted RBP3.99□□□□□ -1.77
HMGCL-206ENST00000496907 hDV102S1A0JD36 115 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 PRSS2P07478 247 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 GCSHP23434 173 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 CXCL5P42830 114 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 LINC00310P59036 64 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 RNF151Q2KHN1 245 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 RNASE13Q5GAN3 156 aaKnown RBP3.99□□□□□ -1.77
HMGCL-206ENST00000496907 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 FAT1Q14517 4588 aa3.99□□□□□ -1.77
HMGCL-206ENST00000496907 IGLV4-69A0A075B6H9 119 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 IGLV5-45A0A087WSX0 123 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 A0A096LNJ9 63 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 F8VRH5 84 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 IGLC3P0DOY3 106 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 PLNP26678 52 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 S100A2P29034 98 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 KRTAP10-2P60368 255 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 C6orf226Q5I0X4 101 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 LINC00173Q6ZV60 143 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 C5orf38Q86SI9 138 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 LINC00469Q8N7U9 141 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 C9orf163Q8N9P6 203 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 LINC00474Q9P2X8 69 aa3.98□□□□□ -1.77
HMGCL-206ENST00000496907 CHTOPQ9Y3Y2 248 aaKnown RBP3.98□□□□□ -1.77
HMGCL-206ENST00000496907 A0A0J9YXV3 536 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 LINC00587B1AMM8 73 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 NDUFA1O15239 70 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 CKS1BP61024 79 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 COX6A2Q02221 97 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 SYCNQ0VAF6 134 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 PMCHL1Q16048 86 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 PET117Q6UWS5 81 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 Q8IZM0 81 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 ORAOV1Q8WV07 137 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
HMGCL-206ENST00000496907 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
HMGCL-206ENST00000496907 TRBV30A0A0K0K1B3 111 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 C20orf202A1L168 122 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 LECT2O14960 151 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 FABP4P15090 132 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 HERVK_113P61574 105 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 TMEM170BQ5T4T1 132 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 Q5VSD8 79 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 C15orf56Q8N910 161 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 CHAC1Q9BUX1 264 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 MRPL35Q9NZE8 188 aaKnown RBP3.96□□□□□ -1.78
HMGCL-206ENST00000496907 CDKN2A-AS1Q9UH64 79 aa3.96□□□□□ -1.78
HMGCL-206ENST00000496907 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 SYS1-DBNDD2H3BUS1 97 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 NUPR1O60356 82 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 DPM2O94777 84 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 SNRPEP62304 92 aaKnown RBP3.95□□□□□ -1.78
HMGCL-206ENST00000496907 WFDC2Q14508 124 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 HIGD2BQ4VC39 106 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 ZC2HC1BQ5TFG8 222 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 SERTAD4-AS1Q5TG53 156 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 DPH3Q96FX2 82 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 CARD19Q96LW7 228 aa3.95□□□□□ -1.78
HMGCL-206ENST00000496907 IGKCP01834 107 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 TLX1NBP0CAT3 122 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 HERV-K104P63124 156 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 COX17Q14061 63 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 KIAA0087Q14695 138 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 ODF1Q14990 250 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 SDIM1Q6ZPB5 146 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 COX7B2Q8TF08 81 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 PLEKHB2Q96CS7 222 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 TOMM7Q9P0U1 55 aa3.94□□□□□ -1.78
HMGCL-206ENST00000496907 IGLV5-39A0A0G2JS06 123 aa3.93□□□□□ -1.78
HMGCL-206ENST00000496907 TMEM223A0PJW6 202 aa3.93□□□□□ -1.78
HMGCL-206ENST00000496907 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
HMGCL-206ENST00000496907 ZNF22P17026 224 aaPredicted RBP3.93□□□□□ -1.78
HMGCL-206ENST00000496907 NMUP48645 174 aa3.93□□□□□ -1.78
HMGCL-206ENST00000496907 LINC01545Q5VT33 79 aa3.93□□□□□ -1.78
HMGCL-206ENST00000496907 VPS13BQ7Z7G8 4022 aa3.93□□□□□ -1.78
HMGCL-206ENST00000496907 MYMXA0A1B0GTQ4 84 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 C5orf52A6NGY3 159 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 H0Y8G0 127 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 SLPIP03973 132 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 SPINK8P0C7L1 97 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 C3orf79P0CE67 100 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 Q6ZRU5 148 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 HIST3H2BBQ8N257 126 aa3.92□□□□□ -1.78
HMGCL-206ENST00000496907 HSBP1L1C9JCN9 74 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 NDUFC2-KCTD14E9PQ53 114 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 LEPROTO15243 131 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 KRTAP10-1P60331 282 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 KRTDAPP60985 99 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 CIRBPQ14011 172 aaKnown RBP3.91□□□□□ -1.78
HMGCL-206ENST00000496907 UNQ6190/PRO20217Q6UXQ8 127 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 Q6ZSA8 131 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 TMA7Q9Y2S6 64 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms