RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	COX7A2L	O14548	114 aa		4.69	□□□□□ -1.66
NVL-223	ENST00000496393	TSHB	P01222	138 aa		4.69	□□□□□ -1.66
NVL-223	ENST00000496393	CT83	Q5H943	113 aa		4.69	□□□□□ -1.66
NVL-223	ENST00000496393	ATP5L2	Q7Z4Y8	100 aa		4.69	□□□□□ -1.66
NVL-223	ENST00000496393	LINC00469	Q8N7U9	141 aa		4.69	□□□□□ -1.66
NVL-223	ENST00000496393	MRAP2	Q96G30	205 aa		4.69	□□□□□ -1.66
NVL-223	ENST00000496393	NAT8B	Q9UHF3	227 aa		4.69	□□□□□ -1.66
NVL-223	ENST00000496393	MUC17	Q685J3	4493 aa		4.68	□□□□□ -1.66
NVL-223	ENST00000496393	SPAG11B	Q08648	103 aa		4.68	□□□□□ -1.66
NVL-223	ENST00000496393	TMEM136	Q6ZRR5	245 aa		4.68	□□□□□ -1.66
NVL-223	ENST00000496393	C5orf38	Q86SI9	138 aa		4.68	□□□□□ -1.66
NVL-223	ENST00000496393	RNASE7	Q9H1E1	156 aa	Known RBP	4.68	□□□□□ -1.66
NVL-223	ENST00000496393	PRO1933	Q9H354	126 aa		4.68	□□□□□ -1.66
NVL-223	ENST00000496393	CDC42SE2	Q9NRR3	84 aa		4.68	□□□□□ -1.66
NVL-223	ENST00000496393	TRAV13-1	A0A0B4J241	112 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393		A8MWL6	223 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393		M0R143	59 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393	SMIM15	Q7Z3B0	74 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393	NUDT10	Q8NFP7	164 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393	TSKU	Q8WUA8	353 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393	NUDT11	Q96G61	164 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393	CNFN	Q9BYD5	112 aa		4.67	□□□□□ -1.66
NVL-223	ENST00000496393		A0A1B0GW15	77 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	C20orf202	A1L168	122 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	SERF1A	O75920	110 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	RPL13A	P40429	203 aa	Known RBP	4.66	□□□□□ -1.66
NVL-223	ENST00000496393	UBE2B	P63146	152 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	PMCHL1	Q16048	86 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	GAGE2E	Q4V326	116 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	TEX43	Q6ZNM6	134 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	BORCS7	Q96B45	105 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	C2orf48	Q96LS8	159 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	VAMP8	Q9BV40	100 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	RPP21	Q9H633	154 aa	Known RBP	4.66	□□□□□ -1.66
NVL-223	ENST00000496393	ST20	Q9HBF5	79 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393	GAGE2D	Q9UEU5	116 aa		4.66	□□□□□ -1.66
NVL-223	ENST00000496393		M0QXV9	152 aa		4.65	□□□□□ -1.67
NVL-223	ENST00000496393	C10orf25	Q5T742	122 aa		4.65	□□□□□ -1.67
NVL-223	ENST00000496393		Q6ZUT4	128 aa		4.65	□□□□□ -1.67
NVL-223	ENST00000496393	ORAOV1	Q8WV07	137 aa		4.65	□□□□□ -1.67
NVL-223	ENST00000496393	MIEN1	Q9BRT3	115 aa		4.65	□□□□□ -1.67
NVL-223	ENST00000496393	TRBV6-5	A0A0K0K1A5	114 aa		4.64	□□□□□ -1.67
NVL-223	ENST00000496393	NUPR1	O60356	82 aa		4.64	□□□□□ -1.67
NVL-223	ENST00000496393	HBB	P68871	147 aa		4.64	□□□□□ -1.67
NVL-223	ENST00000496393	MRPL54	Q6P161	138 aa	Known RBP	4.64	□□□□□ -1.67
NVL-223	ENST00000496393	KRTAP7-1	Q8IUC3	87 aa		4.64	□□□□□ -1.67
NVL-223	ENST00000496393	CHCHD1	Q96BP2	118 aa	Known RBP	4.64	□□□□□ -1.67
NVL-223	ENST00000496393	RETNLB	Q9BQ08	111 aa		4.64	□□□□□ -1.67
NVL-223	ENST00000496393	C6orf48	Q9UBA6	75 aa		4.64	□□□□□ -1.67
NVL-223	ENST00000496393		A0A1B0GXF2	115 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	C9orf118	A6NHY6	69 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	SMKR1	H3BMG3	65 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	NDUFA1	O15239	70 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	HSBP1	O75506	76 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	FCER1G	P30273	86 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	RNF151	Q2KHN1	245 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	C18orf32	Q8TCD1	76 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	MRPL35	Q9NZE8	188 aa	Known RBP	4.63	□□□□□ -1.67
NVL-223	ENST00000496393	UQCR10	Q9UDW1	63 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393	UBE2D4	Q9Y2X8	147 aa		4.63	□□□□□ -1.67
NVL-223	ENST00000496393		A0A087X002	238 aa		4.62	□□□□□ -1.67
NVL-223	ENST00000496393		A0A1B0GV90	55 aa		4.62	□□□□□ -1.67
NVL-223	ENST00000496393	HIGD1C	A8MV81	97 aa		4.62	□□□□□ -1.67
NVL-223	ENST00000496393	POLR2K	P53803	58 aa	Known RBP	4.62	□□□□□ -1.67
NVL-223	ENST00000496393	KRTDAP	P60985	99 aa		4.62	□□□□□ -1.67
NVL-223	ENST00000496393	RIG	Q13278	110 aa		4.62	□□□□□ -1.67
NVL-223	ENST00000496393	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.62	□□□□□ -1.67
NVL-223	ENST00000496393	TRBV27	A0A0K0K1C4	114 aa		4.61	□□□□□ -1.67
NVL-223	ENST00000496393	TCAP	O15273	167 aa		4.61	□□□□□ -1.67
NVL-223	ENST00000496393	C3orf79	P0CE67	100 aa		4.61	□□□□□ -1.67
NVL-223	ENST00000496393	KIAA1644	Q3SXP7	199 aa		4.61	□□□□□ -1.67
NVL-223	ENST00000496393	SPATA45	Q537H7	98 aa		4.61	□□□□□ -1.67
NVL-223	ENST00000496393	AMN1	Q8IY45	258 aa		4.61	□□□□□ -1.67
NVL-223	ENST00000496393		A0A1B0GUT8	65 aa		4.6	□□□□□ -1.67
NVL-223	ENST00000496393	ZNF861P	O60384	105 aa		4.6	□□□□□ -1.67
NVL-223	ENST00000496393	TLX1NB	P0CAT3	122 aa		4.6	□□□□□ -1.67
NVL-223	ENST00000496393	COL5A1-AS1	Q5SY13	56 aa		4.6	□□□□□ -1.67
NVL-223	ENST00000496393	SNHG12	Q9BXW3	62 aa		4.6	□□□□□ -1.67
NVL-223	ENST00000496393	CDIP1	Q9H305	208 aa		4.6	□□□□□ -1.67
NVL-223	ENST00000496393	PAM16	Q9Y3D7	125 aa		4.6	□□□□□ -1.67
NVL-223	ENST00000496393	VCY	O14598	125 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	LINC00614	P0C842	121 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	RPL39	P62891	51 aa	Known RBP	4.59	□□□□□ -1.67
NVL-223	ENST00000496393	C9orf129	Q5T035	196 aa	Known RBP	4.59	□□□□□ -1.67
NVL-223	ENST00000496393	PET117	Q6UWS5	81 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	C2orf82	Q6UX34	121 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	TYMSOS	Q8TAI1	123 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	TMEM191A	Q9H0A3	160 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	ANAPC11	Q9NYG5	84 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	HSPB8	Q9UJY1	196 aa		4.59	□□□□□ -1.67
NVL-223	ENST00000496393	CSDC2	Q9Y534	153 aa	Known RBP	4.59	□□□□□ -1.67
NVL-223	ENST00000496393	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.58	□□□□□ -1.68
NVL-223	ENST00000496393	HSBP1L1	C9JCN9	74 aa		4.58	□□□□□ -1.68
NVL-223	ENST00000496393	LEPROTL1	O95214	131 aa		4.58	□□□□□ -1.68
NVL-223	ENST00000496393	IGLC3	P0DOY3	106 aa		4.58	□□□□□ -1.68
NVL-223	ENST00000496393	SUMO2	P61956	95 aa	Known RBP	4.58	□□□□□ -1.68
NVL-223	ENST00000496393	SMAGP	Q0VAQ4	97 aa		4.58	□□□□□ -1.68
NVL-223	ENST00000496393	NRAC	Q8N912	160 aa		4.58	□□□□□ -1.68
NVL-223	ENST00000496393	PMCHL2	Q9BQD1	86 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms