RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
CMSS1-208ENST00000496116 Q8NAQ8 132 aa7.67□□□□□ -1.18
CMSS1-208ENST00000496116 Q8IZM0 81 aa7.66□□□□□ -1.18
CMSS1-208ENST00000496116 TEX49A0A1B0GTD5 131 aa7.66□□□□□ -1.18
CMSS1-208ENST00000496116 CLPSL2Q6UWE3 100 aa7.66□□□□□ -1.18
CMSS1-208ENST00000496116 IGHV4-30-4P0DP06 118 aa7.65□□□□□ -1.18
CMSS1-208ENST00000496116 VWFP04275 2813 aa7.65□□□□□ -1.19
CMSS1-208ENST00000496116 PFN2P35080 140 aa7.64□□□□□ -1.19
CMSS1-208ENST00000496116 MRPL23Q16540 153 aaKnown RBP7.64□□□□□ -1.19
CMSS1-208ENST00000496116 LINC00269Q8N2A0 174 aa7.64□□□□□ -1.19
CMSS1-208ENST00000496116 CELA1Q9UNI1 258 aa7.64□□□□□ -1.19
CMSS1-208ENST00000496116 ANGP03950 147 aaKnown RBP7.64□□□□□ -1.19
CMSS1-208ENST00000496116 RPL28P46779 137 aaKnown RBP7.64□□□□□ -1.19
CMSS1-208ENST00000496116 CD164L2Q6UWJ8 174 aa7.64□□□□□ -1.19
CMSS1-208ENST00000496116 FLNBO75369 2602 aaKnown RBP7.64□□□□□ -1.19
CMSS1-208ENST00000496116 TRACP01848 142 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 CCL18P55774 89 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 XGP55808 180 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
CMSS1-208ENST00000496116 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 TRAV8-4A0A0B4J246 113 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 CXCL5P42830 114 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 CKS1BP61024 79 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 REG3AQ06141 175 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 LINC00337Q8N6G1 96 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 NBEAL2Q6ZNJ1 2754 aa7.63□□□□□ -1.19
CMSS1-208ENST00000496116 MT-ATP8P03928 68 aa7.62□□□□□ -1.19
CMSS1-208ENST00000496116 HIVEP1P15822 2718 aa7.62□□□□□ -1.19
CMSS1-208ENST00000496116 HTN3P15516 51 aa7.61□□□□□ -1.19
CMSS1-208ENST00000496116 MALP21145 153 aa7.61□□□□□ -1.19
CMSS1-208ENST00000496116 LELP1Q5T871 98 aa7.61□□□□□ -1.19
CMSS1-208ENST00000496116 CHCHD10Q8WYQ3 142 aaPredicted RBP7.61□□□□□ -1.19
CMSS1-208ENST00000496116 TEP1Q99973 2627 aaKnown RBP7.61□□□□□ -1.19
CMSS1-208ENST00000496116 TENM1Q9UKZ4 2725 aa7.61□□□□□ -1.19
CMSS1-208ENST00000496116 ATRQ13535 2644 aa7.6□□□□□ -1.19
CMSS1-208ENST00000496116 COX17Q14061 63 aa7.6□□□□□ -1.19
CMSS1-208ENST00000496116 DEFB121Q5J5C9 76 aa7.6□□□□□ -1.19
CMSS1-208ENST00000496116 IGLV10-54A0A075B6I4 117 aa7.59□□□□□ -1.19
CMSS1-208ENST00000496116 A0A1B0GV72 72 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 H0YGX0 51 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 SMIM11BQ8TCY0 68 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 FAM240AA0A1B0GVK7 77 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 KIAA0087Q14695 138 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 Q8N3U1 123 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 OR13C6PQ8NH95 151 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
CMSS1-208ENST00000496116 SNCGO76070 127 aa7.57□□□□□ -1.2
CMSS1-208ENST00000496116 DNAL4O96015 105 aa7.57□□□□□ -1.2
CMSS1-208ENST00000496116 BAALC-AS2P0C853 105 aa7.57□□□□□ -1.2
CMSS1-208ENST00000496116 MAST4O15021 2626 aa7.56□□□□□ -1.2
CMSS1-208ENST00000496116 TRRAPQ9Y4A5 3859 aa7.56□□□□□ -1.2
CMSS1-208ENST00000496116 NDUFC2O95298 119 aa7.55□□□□□ -1.2
CMSS1-208ENST00000496116 PRR34Q9NV39 138 aa7.55□□□□□ -1.2
CMSS1-208ENST00000496116 KLK5Q9Y337 293 aaPredicted RBP7.55□□□□□ -1.2
CMSS1-208ENST00000496116 ACYP1P07311 99 aa7.54□□□□□ -1.2
CMSS1-208ENST00000496116 LYPD5Q6UWN5 251 aa7.54□□□□□ -1.2
CMSS1-208ENST00000496116 KLK12Q9UKR0 248 aa7.54□□□□□ -1.2
CMSS1-208ENST00000496116 H3BNG1 76 aa7.54□□□□□ -1.2
CMSS1-208ENST00000496116 MUC7Q8TAX7 377 aa7.54□□□□□ -1.2
CMSS1-208ENST00000496116 Q9HAA7 133 aa7.54□□□□□ -1.2
CMSS1-208ENST00000496116 A0A087WYN8 130 aa7.53□□□□□ -1.2
CMSS1-208ENST00000496116 INAFM2P0DMQ5 153 aa7.53□□□□□ -1.2
CMSS1-208ENST00000496116 KRTAP10-11P60412 298 aa7.53□□□□□ -1.2
CMSS1-208ENST00000496116 SPAG11BQ08648 103 aa7.53□□□□□ -1.2
CMSS1-208ENST00000496116 EGFEM1PQ0D2K5 195 aa7.52□□□□□ -1.2
CMSS1-208ENST00000496116 GAGE2BQ13066 116 aa7.52□□□□□ -1.2
CMSS1-208ENST00000496116 GAGE2EQ4V326 116 aa7.52□□□□□ -1.2
CMSS1-208ENST00000496116 C15orf53Q8NAA6 179 aa7.52□□□□□ -1.2
CMSS1-208ENST00000496116 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.2
CMSS1-208ENST00000496116 C3orf56Q8N813 242 aa7.52□□□□□ -1.21
CMSS1-208ENST00000496116 TMEM126AQ9H061 195 aa7.52□□□□□ -1.21
CMSS1-208ENST00000496116 ENHOQ6UWT2 76 aa7.51□□□□□ -1.21
CMSS1-208ENST00000496116 RETNQ9HD89 108 aa7.51□□□□□ -1.21
CMSS1-208ENST00000496116 LECT2O14960 151 aa7.51□□□□□ -1.21
CMSS1-208ENST00000496116 KRTAP24-1Q3LI83 254 aa7.51□□□□□ -1.21
CMSS1-208ENST00000496116 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
CMSS1-208ENST00000496116 KPRPQ5T749 579 aaPredicted RBP7.51□□□□□ -1.21
CMSS1-208ENST00000496116 Q6Q795 121 aa7.51□□□□□ -1.21
CMSS1-208ENST00000496116 F8P00451 2351 aa7.5□□□□□ -1.21
CMSS1-208ENST00000496116 A0A0J9YWU9 116 aa7.49□□□□□ -1.21
CMSS1-208ENST00000496116 A0A1B0GX51 115 aa7.49□□□□□ -1.21
CMSS1-208ENST00000496116 CYSRT1A8MQ03 144 aa7.49□□□□□ -1.21
CMSS1-208ENST00000496116 C22orf24Q9Y442 160 aa7.49□□□□□ -1.21
CMSS1-208ENST00000496116 UNQ6190/PRO20217Q6UXQ8 127 aa7.49□□□□□ -1.21
CMSS1-208ENST00000496116 Q6ZTC4 211 aa7.49□□□□□ -1.21
CMSS1-208ENST00000496116 C6orf223Q8N319 242 aa7.49□□□□□ -1.21
CMSS1-208ENST00000496116 PRR3P79522 188 aaKnown RBP7.48□□□□□ -1.21
CMSS1-208ENST00000496116 TTC32Q5I0X7 151 aa7.48□□□□□ -1.21
CMSS1-208ENST00000496116 S100A7L2Q5SY68 101 aa7.48□□□□□ -1.21
CMSS1-208ENST00000496116 C10orf25Q5T742 122 aa7.48□□□□□ -1.21
CMSS1-208ENST00000496116 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
CMSS1-208ENST00000496116 GVQW2A0A096LPI5 108 aaPredicted RBP7.47□□□□□ -1.21
CMSS1-208ENST00000496116 NANOS2P60321 138 aaKnown RBP7.47□□□□□ -1.21
CMSS1-208ENST00000496116 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
CMSS1-208ENST00000496116 ANAPC13Q9BS18 74 aa7.46□□□□□ -1.21
CMSS1-208ENST00000496116 NCR3O14931 201 aa7.46□□□□□ -1.22
CMSS1-208ENST00000496116 LINC00526Q96FQ7 95 aa7.46□□□□□ -1.22
CMSS1-208ENST00000496116 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
CMSS1-208ENST00000496116 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms