RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
HDAC3-214ENST00000495485 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
HDAC3-214ENST00000495485 GTF2H5Q6ZYL4 71 aa7□□□□□ -1.29
HDAC3-214ENST00000495485 RAB37Q96AX2 223 aa7□□□□□ -1.29
HDAC3-214ENST00000495485 PPDPFQ9H3Y8 114 aa7□□□□□ -1.29
HDAC3-214ENST00000495485 KLK12Q9UKR0 248 aa7□□□□□ -1.29
HDAC3-214ENST00000495485 A0A1B0GWB2 263 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 IGHV3-33P01772 117 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 FABP2P12104 132 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 CKS1BP61024 79 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 ESRGQ1W209 222 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 LINC01556Q5JQF7 62 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 CLPSL2Q6UWE3 100 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 MUSTN1Q8IVN3 82 aa6.99□□□□□ -1.29
HDAC3-214ENST00000495485 ZNF625Q96I27 306 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-214ENST00000495485 IBA57-AS1B1ANH7 110 aa6.98□□□□□ -1.29
HDAC3-214ENST00000495485 IGLL5B9A064 214 aa6.98□□□□□ -1.29
HDAC3-214ENST00000495485 H3BUT2 72 aa6.98□□□□□ -1.29
HDAC3-214ENST00000495485 K7EP13 123 aa6.98□□□□□ -1.29
HDAC3-214ENST00000495485 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
HDAC3-214ENST00000495485 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
HDAC3-214ENST00000495485 UBE2WQ96B02 151 aa6.97□□□□□ -1.29
HDAC3-214ENST00000495485 RMI2Q96E14 147 aa6.97□□□□□ -1.29
HDAC3-214ENST00000495485 PRO1854Q9UHT4 67 aa6.97□□□□□ -1.29
HDAC3-214ENST00000495485 IGLV10-54A0A075B6I4 117 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 A4D1N5 150 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 GAGE12HA6NDE8 117 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 GAGE10A6NGK3 116 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 LINC00158P58513 81 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 UBE2V1Q13404 147 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 COX17Q14061 63 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 WFDC10BQ8IUB3 73 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 LITAFQ99732 161 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 C1orf43Q9BWL3 253 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 APLNQ9ULZ1 77 aa6.96□□□□□ -1.3
HDAC3-214ENST00000495485 LCE6AA0A183 80 aa6.95□□□□□ -1.3
HDAC3-214ENST00000495485 A0A1W2PPM0 123 aa6.95□□□□□ -1.3
HDAC3-214ENST00000495485 F8WDY8 70 aa6.95□□□□□ -1.3
HDAC3-214ENST00000495485 DNAH10OSP0CZ25 163 aa6.95□□□□□ -1.3
HDAC3-214ENST00000495485 FOXI1Q12951 378 aa6.95□□□□□ -1.3
HDAC3-214ENST00000495485 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
HDAC3-214ENST00000495485 ERG28Q9UKR5 140 aa6.95□□□□□ -1.3
HDAC3-214ENST00000495485 CFC1BP0CG36 223 aa6.94□□□□□ -1.3
HDAC3-214ENST00000495485 CFC1P0CG37 223 aa6.94□□□□□ -1.3
HDAC3-214ENST00000495485 LINC00308Q8TCZ7 52 aa6.94□□□□□ -1.3
HDAC3-214ENST00000495485 UPK3BQ9BT76 320 aa6.94□□□□□ -1.3
HDAC3-214ENST00000495485 PGPEP1Q9NXJ5 209 aa6.94□□□□□ -1.3
HDAC3-214ENST00000495485 K7ERJ3 54 aa6.93□□□□□ -1.3
HDAC3-214ENST00000495485 COX6CP09669 75 aa6.93□□□□□ -1.3
HDAC3-214ENST00000495485 ADAMTSL4-AS1Q5T5F5 129 aa6.93□□□□□ -1.3
HDAC3-214ENST00000495485 LINC00476Q8WZB0 136 aa6.93□□□□□ -1.3
HDAC3-214ENST00000495485 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
HDAC3-214ENST00000495485 PSMB2P49721 201 aa6.92□□□□□ -1.3
HDAC3-214ENST00000495485 SPAG11BQ08648 103 aa6.92□□□□□ -1.3
HDAC3-214ENST00000495485 Q1RN00 199 aa6.92□□□□□ -1.3
HDAC3-214ENST00000495485 LINC00588Q9Y4M8 146 aa6.92□□□□□ -1.3
HDAC3-214ENST00000495485 SPCS1Q9Y6A9 102 aa6.92□□□□□ -1.3
HDAC3-214ENST00000495485 TRBV20-1A0A075B6N2 111 aa6.91□□□□□ -1.3
HDAC3-214ENST00000495485 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
HDAC3-214ENST00000495485 A0A0U1RRA0 63 aa6.91□□□□□ -1.3
HDAC3-214ENST00000495485 K7EP34 96 aa6.91□□□□□ -1.3
HDAC3-214ENST00000495485 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
HDAC3-214ENST00000495485 UBE2DNLQ8IWF7 75 aa6.91□□□□□ -1.3
HDAC3-214ENST00000495485 Q8N3U1 123 aa6.91□□□□□ -1.3
HDAC3-214ENST00000495485 IGKV2D-24A0A075B6R9 120 aa6.9□□□□□ -1.3
HDAC3-214ENST00000495485 LOC107984156A0A0G2JMH3 177 aa6.9□□□□□ -1.3
HDAC3-214ENST00000495485 PFN2P35080 140 aa6.9□□□□□ -1.3
HDAC3-214ENST00000495485 NPC2P61916 151 aa6.9□□□□□ -1.3
HDAC3-214ENST00000495485 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
HDAC3-214ENST00000495485 ARL17AQ8IVW1 177 aa6.9□□□□□ -1.3
HDAC3-214ENST00000495485 MIR7-3HGQ8N6C7 128 aa6.9□□□□□ -1.3
HDAC3-214ENST00000495485 TSPAN13O95857 204 aa6.89□□□□□ -1.31
HDAC3-214ENST00000495485 DAND5Q8N907 189 aa6.89□□□□□ -1.31
HDAC3-214ENST00000495485 RYR2Q92736 4967 aa6.89□□□□□ -1.31
HDAC3-214ENST00000495485 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-214ENST00000495485 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
HDAC3-214ENST00000495485 LY6G6CO95867 125 aa6.88□□□□□ -1.31
HDAC3-214ENST00000495485 C2orf48Q96LS8 159 aa6.88□□□□□ -1.31
HDAC3-214ENST00000495485 NAA38Q9BRA0 125 aaKnown RBP6.88□□□□□ -1.31
HDAC3-214ENST00000495485 SND1-IT1Q9HBX3 110 aa6.88□□□□□ -1.31
HDAC3-214ENST00000495485 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-214ENST00000495485 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
HDAC3-214ENST00000495485 FRAS1Q86XX4 4008 aa6.86□□□□□ -1.31
HDAC3-214ENST00000495485 NDUFC2O95298 119 aa6.86□□□□□ -1.31
HDAC3-214ENST00000495485 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
HDAC3-214ENST00000495485 TTC32Q5I0X7 151 aa6.86□□□□□ -1.31
HDAC3-214ENST00000495485 C2orf82Q6UX34 121 aa6.86□□□□□ -1.31
HDAC3-214ENST00000495485 DNAH10Q8IVF4 4471 aa6.86□□□□□ -1.31
HDAC3-214ENST00000495485 RYR3Q15413 4870 aa6.85□□□□□ -1.31
HDAC3-214ENST00000495485 HYDINQ4G0P3 5121 aa6.85□□□□□ -1.31
HDAC3-214ENST00000495485 F8W1H4 67 aa6.85□□□□□ -1.31
HDAC3-214ENST00000495485 H7C2G1 150 aa6.85□□□□□ -1.31
HDAC3-214ENST00000495485 Q9HAA7 133 aa6.85□□□□□ -1.31
HDAC3-214ENST00000495485 ATXN8Q156A1 80 aa6.84□□□□□ -1.31
HDAC3-214ENST00000495485 KRTAP26-1Q6PEX3 210 aa6.84□□□□□ -1.31
HDAC3-214ENST00000495485 UNQ6190/PRO20217Q6UXQ8 127 aa6.84□□□□□ -1.31
HDAC3-214ENST00000495485 DNAH2Q9P225 4427 aa6.83□□□□□ -1.32
HDAC3-214ENST00000495485 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
HDAC3-214ENST00000495485 SOSTDC1Q6X4U4 206 aa6.83□□□□□ -1.32
HDAC3-214ENST00000495485 CBY1Q9Y3M2 126 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms