RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 MT-ND6P03923 174 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 PRSS2P07478 247 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 NPSP0C0P6 89 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 CKS1BP61024 79 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 HERVK_113P63121 156 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 PRR3P79522 188 aaKnown RBP4.51□□□□□ -1.69
RBM39-239ENST00000494274 Q6ZRP5 223 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 PHF5AQ7RTV0 110 aaKnown RBP4.51□□□□□ -1.69
RBM39-239ENST00000494274 ERASQ7Z444 233 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 PACRGQ96M98 296 aaPredicted RBP4.51□□□□□ -1.69
RBM39-239ENST00000494274 TIMM17AQ99595 171 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 C6orf48Q9UBA6 75 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 TRAPPC1Q9Y5R8 145 aa4.51□□□□□ -1.69
RBM39-239ENST00000494274 FAM168BA1KXE4 195 aa4.5□□□□□ -1.69
RBM39-239ENST00000494274 C5orf52A6NGY3 159 aa4.5□□□□□ -1.69
RBM39-239ENST00000494274 SEC11AP67812 179 aa4.5□□□□□ -1.69
RBM39-239ENST00000494274 LINC01561Q8N1V8 128 aa4.5□□□□□ -1.69
RBM39-239ENST00000494274 LINC00469Q8N7U9 141 aa4.5□□□□□ -1.69
RBM39-239ENST00000494274 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
RBM39-239ENST00000494274 CDKN2A-AS1Q9UH64 79 aa4.5□□□□□ -1.69
RBM39-239ENST00000494274 TRBV30A0A0K0K1B3 111 aa4.49□□□□□ -1.69
RBM39-239ENST00000494274 NDUFA6P56556 154 aa4.49□□□□□ -1.69
RBM39-239ENST00000494274 SERTAD4-AS1Q5TG53 156 aa4.49□□□□□ -1.69
RBM39-239ENST00000494274 FAM19A5Q7Z5A7 132 aaPredicted RBP4.49□□□□□ -1.69
RBM39-239ENST00000494274 FAM19A3Q7Z5A8 133 aa4.49□□□□□ -1.69
RBM39-239ENST00000494274 CST9LQ9H4G1 147 aa4.49□□□□□ -1.69
RBM39-239ENST00000494274 LINC01546A6NGU7 62 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 LINC01549A6NIU2 74 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 TLX1NBP0CAT3 122 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 RAB5BP61020 215 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 C1orf137Q5JT78 98 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 SPINK6Q6UWN8 80 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 Q8IZM0 81 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 PSORS1C2Q9UIG4 136 aa4.48□□□□□ -1.69
RBM39-239ENST00000494274 TINCRA0A1B0GVN0 87 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BKO60814 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 TRGC2P03986 189 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BJP06899 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 SPINK8P0C7L1 97 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 LINC00614P0C842 121 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BOP23527 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BBP33778 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BDP58876 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 SNRPEP62304 92 aaKnown RBP4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BCP62807 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 UBE2BP63146 152 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 SRSF9Q13242 221 aaKnown RBP eCLIP4.47□□□□□ -1.695e-10■■■■□ 22.3
RBM39-239ENST00000494274 PMVKQ15126 192 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 PMCHL1Q16048 86 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST2H2BEQ16778 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.47□□□□□ -1.69
RBM39-239ENST00000494274 C18orf32Q8TCD1 76 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
RBM39-239ENST00000494274 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
RBM39-239ENST00000494274 F8VRH5 84 aa4.46□□□□□ -1.7
RBM39-239ENST00000494274 MT1HL1P0DM35 61 aa4.46□□□□□ -1.7
RBM39-239ENST00000494274 PDZD11Q5EBL8 140 aa4.46□□□□□ -1.7
RBM39-239ENST00000494274 C9orf129Q5T035 196 aaKnown RBP4.46□□□□□ -1.7
RBM39-239ENST00000494274 REG3GQ6UW15 175 aa4.46□□□□□ -1.7
RBM39-239ENST00000494274 COX7B2Q8TF08 81 aa4.46□□□□□ -1.7
RBM39-239ENST00000494274 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.7
RBM39-239ENST00000494274 XAGE1AQ9HD64 81 aa4.46□□□□□ -1.7
RBM39-239ENST00000494274 A0A096LNJ9 63 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 SMIM1B2RUZ4 78 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 H3BRM9 83 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 M0QXV9 152 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 COA6Q5JTJ3 125 aaKnown RBP4.45□□□□□ -1.7
RBM39-239ENST00000494274 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 LINC00518Q8N0U6 118 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 LINC01600Q96MT4 127 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 PLA2G2DQ9UNK4 145 aa4.45□□□□□ -1.7
RBM39-239ENST00000494274 IGLV5-45A0A087WSX0 123 aa4.44□□□□□ -1.7
RBM39-239ENST00000494274 HBDP02042 147 aa4.44□□□□□ -1.7
RBM39-239ENST00000494274 CXCL5P42830 114 aa4.44□□□□□ -1.7
RBM39-239ENST00000494274 BAGE3Q86Y29 109 aa4.44□□□□□ -1.7
RBM39-239ENST00000494274 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
RBM39-239ENST00000494274 ATP5LO75964 103 aa4.43□□□□□ -1.7
RBM39-239ENST00000494274 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
RBM39-239ENST00000494274 HIST3H2BBQ8N257 126 aa4.43□□□□□ -1.7
RBM39-239ENST00000494274 S100A6P06703 90 aa4.42□□□□□ -1.7
RBM39-239ENST00000494274 IGLC3P0DOY3 106 aa4.42□□□□□ -1.7
RBM39-239ENST00000494274 PFN2P35080 140 aa4.42□□□□□ -1.7
RBM39-239ENST00000494274 LINC00310P59036 64 aa4.42□□□□□ -1.7
RBM39-239ENST00000494274 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
RBM39-239ENST00000494274 LBHQ53QV2 105 aaPredicted RBP4.42□□□□□ -1.7
RBM39-239ENST00000494274 TMEM170BQ5T4T1 132 aa4.42□□□□□ -1.7
RBM39-239ENST00000494274 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
RBM39-239ENST00000494274 GAGE10A6NGK3 116 aa4.41□□□□□ -1.7
RBM39-239ENST00000494274 NUPR1O60356 82 aa4.41□□□□□ -1.7
RBM39-239ENST00000494274 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
RBM39-239ENST00000494274 AKR1D1P51857 326 aa4.41□□□□□ -1.7
RBM39-239ENST00000494274 FAM19A2Q8N3H0 131 aa4.41□□□□□ -1.7
RBM39-239ENST00000494274 DIRC1Q969H9 104 aa4.41□□□□□ -1.7
RBM39-239ENST00000494274 CHCHD1Q96BP2 118 aaKnown RBP4.41□□□□□ -1.7
RBM39-239ENST00000494274 ZNF625Q96I27 306 aaPredicted RBP4.41□□□□□ -1.7
RBM39-239ENST00000494274 CHTOPQ9Y3Y2 248 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms