RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-225	ENST00000494018	IGLV6-57	P01721	117 aa		5.01	□□□□□ -1.61
NR1H3-225	ENST00000494018	NRAC	Q8N912	160 aa		5.01	□□□□□ -1.61
NR1H3-225	ENST00000494018	CCL20	P78556	96 aa		5	□□□□□ -1.61
NR1H3-225	ENST00000494018	MRPS36	P82909	103 aa	Known RBP	5	□□□□□ -1.61
NR1H3-225	ENST00000494018		Q6ZN92	141 aa		5	□□□□□ -1.61
NR1H3-225	ENST00000494018	C11orf52	Q96A22	123 aa		5	□□□□□ -1.61
NR1H3-225	ENST00000494018	TIMM17A	Q99595	171 aa		5	□□□□□ -1.61
NR1H3-225	ENST00000494018	GNG13	Q9P2W3	67 aa		5	□□□□□ -1.61
NR1H3-225	ENST00000494018	TCAP	O15273	167 aa		4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018	RPS29	P62273	56 aa	Known RBP	4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018	GAGE2A	Q6NT46	116 aa		4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018	FAM231D	Q6ZW35	169 aa		4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018		Q8IZM0	81 aa		4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018	SPANXA1	Q9NS26	97 aa		4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018	MED9	Q9NWA0	146 aa		4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.99	□□□□□ -1.61
NR1H3-225	ENST00000494018	FXYD6-FXYD2	A0A087WZ82	144 aa		4.98	□□□□□ -1.61
NR1H3-225	ENST00000494018		K7EN84	100 aa		4.98	□□□□□ -1.61
NR1H3-225	ENST00000494018	NPS	P0C0P6	89 aa		4.98	□□□□□ -1.61
NR1H3-225	ENST00000494018	SMCR5	Q8TEV8	140 aa		4.98	□□□□□ -1.61
NR1H3-225	ENST00000494018	MBD3L1	Q8WWY6	194 aa		4.98	□□□□□ -1.61
NR1H3-225	ENST00000494018	IGLV4-3	A0A075B6K6	122 aa		4.97	□□□□□ -1.61
NR1H3-225	ENST00000494018	RPL37	P61927	97 aa	Known RBP	4.97	□□□□□ -1.61
NR1H3-225	ENST00000494018	TMEM191A	Q9H0A3	160 aa		4.97	□□□□□ -1.61
NR1H3-225	ENST00000494018	KMT2D	O14686	5537 aa		4.97	□□□□□ -1.61
NR1H3-225	ENST00000494018	RAB14	P61106	215 aa		4.96	□□□□□ -1.62
NR1H3-225	ENST00000494018	HRCT1	Q6UXD1	115 aa		4.96	□□□□□ -1.62
NR1H3-225	ENST00000494018	LINC00299	Q6ZSB3	139 aa		4.96	□□□□□ -1.62
NR1H3-225	ENST00000494018		Q8NDZ9	215 aa		4.96	□□□□□ -1.62
NR1H3-225	ENST00000494018	OCC1	Q8TAD7	63 aa		4.96	□□□□□ -1.62
NR1H3-225	ENST00000494018	BIN3	Q9NQY0	253 aa		4.96	□□□□□ -1.62
NR1H3-225	ENST00000494018	GATC	O43716	136 aa	Known RBP	4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	H2AFB1	P0C5Y9	115 aa		4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	VPREB1	P12018	145 aa		4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	SSBP3-AS1	Q7Z2R9	100 aa		4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	LINC01551	Q86U37	167 aa		4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	LINC01561	Q8N1V8	128 aa		4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	SMIM12	Q96EX1	92 aa		4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.95	□□□□□ -1.62
NR1H3-225	ENST00000494018	LGALS3	P17931	250 aa	Known RBP	4.94	□□□□□ -1.62
NR1H3-225	ENST00000494018	IFI27	P40305	119 aa	Predicted RBP	4.94	□□□□□ -1.62
NR1H3-225	ENST00000494018	AKAP14	Q86UN6	197 aa		4.94	□□□□□ -1.62
NR1H3-225	ENST00000494018	BORCS7	Q96B45	105 aa		4.94	□□□□□ -1.62
NR1H3-225	ENST00000494018	TMEM141	Q96I45	108 aa		4.94	□□□□□ -1.62
NR1H3-225	ENST00000494018	NDUFA13	Q9P0J0	144 aa		4.94	□□□□□ -1.62
NR1H3-225	ENST00000494018	CDKN2A-AS1	Q9UH64	79 aa		4.94	□□□□□ -1.62
NR1H3-225	ENST00000494018		A0A1B0GUT8	65 aa		4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	PFN2	P35080	140 aa		4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	IFITM3	Q01628	133 aa		4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	MRPL51	Q4U2R6	128 aa	Known RBP	4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	C9orf153	Q5TBE3	101 aa		4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	TEX43	Q6ZNM6	134 aa		4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	FAM19A3	Q7Z5A8	133 aa		4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	S100Z	Q8WXG8	99 aa		4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	EIF5A2	Q9GZV4	153 aa	Known RBP	4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	GEMIN7	Q9H840	131 aa	Known RBP	4.93	□□□□□ -1.62
NR1H3-225	ENST00000494018	MDN1	Q9NU22	5596 aa		4.92	□□□□□ -1.62
NR1H3-225	ENST00000494018		A8MWL6	223 aa		4.92	□□□□□ -1.62
NR1H3-225	ENST00000494018	PPP1R2P9	O14990	202 aa		4.92	□□□□□ -1.62
NR1H3-225	ENST00000494018	LINC00483	Q53H64	154 aa		4.92	□□□□□ -1.62
NR1H3-225	ENST00000494018	MANBAL	Q9NQG1	85 aa		4.92	□□□□□ -1.62
NR1H3-225	ENST00000494018	HIGD1C	A8MV81	97 aa		4.91	□□□□□ -1.62
NR1H3-225	ENST00000494018	ERC2-IT1	O76042	136 aa		4.91	□□□□□ -1.62
NR1H3-225	ENST00000494018	PPP1R17	O96001	155 aa		4.91	□□□□□ -1.62
NR1H3-225	ENST00000494018	SMIM2	Q9BVW6	85 aa		4.91	□□□□□ -1.62
NR1H3-225	ENST00000494018	KIAA1644	Q3SXP7	199 aa		4.9	□□□□□ -1.63
NR1H3-225	ENST00000494018	COX7B2	Q8TF08	81 aa		4.9	□□□□□ -1.63
NR1H3-225	ENST00000494018	C2orf88	Q9BSF0	95 aa		4.9	□□□□□ -1.63
NR1H3-225	ENST00000494018	RAB5A	P20339	215 aa		4.89	□□□□□ -1.63
NR1H3-225	ENST00000494018	CKS2	P33552	79 aa		4.89	□□□□□ -1.63
NR1H3-225	ENST00000494018	CXCL5	P42830	114 aa		4.89	□□□□□ -1.63
NR1H3-225	ENST00000494018	C20orf78	Q9BR46	151 aa		4.89	□□□□□ -1.63
NR1H3-225	ENST00000494018	SND1-IT1	Q9HBX3	110 aa		4.89	□□□□□ -1.63
NR1H3-225	ENST00000494018	LOC389332	A0A1B0GUA5	103 aa		4.88	□□□□□ -1.63
NR1H3-225	ENST00000494018	ARPC5	O15511	151 aa		4.88	□□□□□ -1.63
NR1H3-225	ENST00000494018	PDE6D	O43924	150 aa		4.88	□□□□□ -1.63
NR1H3-225	ENST00000494018	NPY	P01303	97 aa		4.88	□□□□□ -1.63
NR1H3-225	ENST00000494018	VCX2	Q9H322	139 aa		4.88	□□□□□ -1.63
NR1H3-225	ENST00000494018	PYGO1	Q9Y3Y4	419 aa		4.88	□□□□□ -1.63
NR1H3-225	ENST00000494018	C20orf202	A1L168	122 aa		4.87	□□□□□ -1.63
NR1H3-225	ENST00000494018	SMIM1	B2RUZ4	78 aa		4.87	□□□□□ -1.63
NR1H3-225	ENST00000494018	RPL24	P83731	157 aa	Known RBP	4.87	□□□□□ -1.63
NR1H3-225	ENST00000494018	FAM104B	Q5XKR9	115 aa		4.87	□□□□□ -1.63
NR1H3-225	ENST00000494018	TRBV24-1	A0A075B6N3	115 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	UMAD1	C9J7I0	102 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018		D6R8Y8	96 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	KRTAP2-3	P0C7H8	128 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	RIG	Q13278	110 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	C2orf66	Q6UXQ4	117 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	AMELX	Q99217	191 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	KRTAP2-4	Q9BYR9	128 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	BATF3	Q9NR55	127 aa		4.86	□□□□□ -1.63
NR1H3-225	ENST00000494018	ETDC	A0A1B0GVM5	59 aa		4.85	□□□□□ -1.63
NR1H3-225	ENST00000494018	SPINK8	P0C7L1	97 aa		4.85	□□□□□ -1.63
NR1H3-225	ENST00000494018		H7C2G1	150 aa		4.84	□□□□□ -1.63
NR1H3-225	ENST00000494018	HERVK_113	P63121	156 aa		4.84	□□□□□ -1.63
NR1H3-225	ENST00000494018	ZNF625	Q96I27	306 aa	Predicted RBP	4.84	□□□□□ -1.63
NR1H3-225	ENST00000494018	LIMD2	Q9BT23	127 aa		4.84	□□□□□ -1.63
NR1H3-225	ENST00000494018	SMLR1	H3BR10	107 aa		4.83	□□□□□ -1.64
NR1H3-225	ENST00000494018	LINC00862	A6NCI5	91 aa		4.82	□□□□□ -1.64

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