RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 CKS1BP61024 79 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 FAM19A3Q7Z5A8 133 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 MRPL35Q9NZE8 188 aaKnown RBP6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 PLA2G2DQ9UNK4 145 aa6.6□□□□□ -1.35
TRAPPC12-222ENST00000493792 HSBP1O75506 76 aa6.59□□□□□ -1.35
TRAPPC12-222ENST00000493792 SCO1O75880 301 aa6.59□□□□□ -1.35
TRAPPC12-222ENST00000493792 PTTG1IPP53801 180 aa6.59□□□□□ -1.35
TRAPPC12-222ENST00000493792 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
TRAPPC12-222ENST00000493792 CHCHD1Q96BP2 118 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-222ENST00000493792 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
TRAPPC12-222ENST00000493792 LRP2P98164 4655 aa6.58□□□□□ -1.36
TRAPPC12-222ENST00000493792 COLCA2A8K830 154 aa6.58□□□□□ -1.36
TRAPPC12-222ENST00000493792 SPINK8P0C7L1 97 aa6.58□□□□□ -1.36
TRAPPC12-222ENST00000493792 KIAA0087Q14695 138 aa6.58□□□□□ -1.36
TRAPPC12-222ENST00000493792 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
TRAPPC12-222ENST00000493792 PDZD11Q5EBL8 140 aa6.58□□□□□ -1.36
TRAPPC12-222ENST00000493792 C6orf48Q9UBA6 75 aa6.58□□□□□ -1.36
TRAPPC12-222ENST00000493792 H3BRM9 83 aa6.57□□□□□ -1.36
TRAPPC12-222ENST00000493792 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC12-222ENST00000493792 GAGE2EQ4V326 116 aa6.57□□□□□ -1.36
TRAPPC12-222ENST00000493792 Q8IZM0 81 aa6.57□□□□□ -1.36
TRAPPC12-222ENST00000493792 FAM19A2Q8N3H0 131 aa6.57□□□□□ -1.36
TRAPPC12-222ENST00000493792 GAGE2DQ9UEU5 116 aa6.57□□□□□ -1.36
TRAPPC12-222ENST00000493792 TRBV30A0A0K0K1B3 111 aa6.56□□□□□ -1.36
TRAPPC12-222ENST00000493792 SMIM1B2RUZ4 78 aa6.56□□□□□ -1.36
TRAPPC12-222ENST00000493792 H0Y8G0 127 aa6.56□□□□□ -1.36
TRAPPC12-222ENST00000493792 C9orf116Q5BN46 136 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC12-222ENST00000493792 COX7B2Q8TF08 81 aa6.56□□□□□ -1.36
TRAPPC12-222ENST00000493792 IGLV5-45A0A087WSX0 123 aa6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 SERF1AO75920 110 aa6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 OXTP01178 125 aa6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 IGLC3P0DOY3 106 aa6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 TMEM170BQ5T4T1 132 aa6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 Q6ZRP5 223 aa6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 IFI27L1Q96BM0 104 aa6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
TRAPPC12-222ENST00000493792 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
TRAPPC12-222ENST00000493792 F8VRH5 84 aa6.54□□□□□ -1.36
TRAPPC12-222ENST00000493792 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC12-222ENST00000493792 CXCL5P42830 114 aa6.54□□□□□ -1.36
TRAPPC12-222ENST00000493792 C11orf86A6NJI1 115 aa6.53□□□□□ -1.36
TRAPPC12-222ENST00000493792 NDUFC2-KCTD14E9PQ53 114 aa6.53□□□□□ -1.36
TRAPPC12-222ENST00000493792 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC12-222ENST00000493792 LEPROTL1O95214 131 aa6.52□□□□□ -1.37
TRAPPC12-222ENST00000493792 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
TRAPPC12-222ENST00000493792 FABP4P15090 132 aa6.52□□□□□ -1.37
TRAPPC12-222ENST00000493792 TRAV12-1A0A0B4J245 112 aa6.51□□□□□ -1.37
TRAPPC12-222ENST00000493792 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
TRAPPC12-222ENST00000493792 PKHD1L1Q86WI1 4243 aa6.5□□□□□ -1.37
TRAPPC12-222ENST00000493792 NUPR1O60356 82 aa6.5□□□□□ -1.37
TRAPPC12-222ENST00000493792 LINC00310P59036 64 aa6.5□□□□□ -1.37
TRAPPC12-222ENST00000493792 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
TRAPPC12-222ENST00000493792 PHF5AQ7RTV0 110 aaKnown RBP6.5□□□□□ -1.37
TRAPPC12-222ENST00000493792 XAGE1AQ9HD64 81 aa6.5□□□□□ -1.37
TRAPPC12-222ENST00000493792 HSPB8Q9UJY1 196 aa6.5□□□□□ -1.37
TRAPPC12-222ENST00000493792 HNRNPA3P51991 378 aaKnown RBP6.49□□□□□ -1.37
TRAPPC12-222ENST00000493792 IGLV5-39A0A0G2JS06 123 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 M0QXV9 152 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BKO60814 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BJP06899 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BOP23527 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BBP33778 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 PFN2P35080 140 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BDP58876 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BCP62807 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 UBE2BP63146 152 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST2H2BEQ16778 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 C9orf129Q5T035 196 aaKnown RBP6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BHQ93079 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 ZNF625Q96I27 306 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BNQ99877 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 HIST1H2BMQ99879 126 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 TNXBP22105 4242 aa6.48□□□□□ -1.37
TRAPPC12-222ENST00000493792 PMCHL2Q9BQD1 86 aa6.47□□□□□ -1.37
TRAPPC12-222ENST00000493792 TMEM223A0PJW6 202 aa6.46□□□□□ -1.38
TRAPPC12-222ENST00000493792 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
TRAPPC12-222ENST00000493792 S100A1P23297 94 aa6.46□□□□□ -1.38
TRAPPC12-222ENST00000493792 ODF1Q14990 250 aa6.46□□□□□ -1.38
TRAPPC12-222ENST00000493792 MAP1LC3CQ9BXW4 147 aa6.46□□□□□ -1.38
TRAPPC12-222ENST00000493792 ATP6V1G1O75348 118 aa6.45□□□□□ -1.38
TRAPPC12-222ENST00000493792 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
TRAPPC12-222ENST00000493792 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
TRAPPC12-222ENST00000493792 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
TRAPPC12-222ENST00000493792 DPM2O94777 84 aa6.44□□□□□ -1.38
TRAPPC12-222ENST00000493792 PLNP26678 52 aa6.44□□□□□ -1.38
TRAPPC12-222ENST00000493792 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
TRAPPC12-222ENST00000493792 A0A0U1RRA0 63 aa6.43□□□□□ -1.38
TRAPPC12-222ENST00000493792 LINC00158P58513 81 aa6.43□□□□□ -1.38
TRAPPC12-222ENST00000493792 HERVK_113P61574 105 aa6.43□□□□□ -1.38
TRAPPC12-222ENST00000493792 LBHQ53QV2 105 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC12-222ENST00000493792 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
TRAPPC12-222ENST00000493792 C22orf24Q9Y442 160 aa6.43□□□□□ -1.38
TRAPPC12-222ENST00000493792 GAGE10A6NGK3 116 aa6.42□□□□□ -1.38
TRAPPC12-222ENST00000493792 IGKCP01834 107 aa6.42□□□□□ -1.38
TRAPPC12-222ENST00000493792 MEIG1Q5JSS6 88 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms