RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 DNAH17Q9UFH2 4485 aa8.36□□□□□ -1.07
VPS52-220ENST00000493674 FRAS1Q86XX4 4008 aa8.35□□□□□ -1.07
VPS52-220ENST00000493674 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
VPS52-220ENST00000493674 EREGO14944 169 aa8.35□□□□□ -1.07
VPS52-220ENST00000493674 CXCL5P42830 114 aa8.35□□□□□ -1.07
VPS52-220ENST00000493674 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
VPS52-220ENST00000493674 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
VPS52-220ENST00000493674 M0R143 59 aa8.34□□□□□ -1.07
VPS52-220ENST00000493674 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
VPS52-220ENST00000493674 HERV-K104P63124 156 aa8.34□□□□□ -1.07
VPS52-220ENST00000493674 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
VPS52-220ENST00000493674 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
VPS52-220ENST00000493674 LITAFQ99732 161 aa8.34□□□□□ -1.07
VPS52-220ENST00000493674 F8WDY8 70 aa8.33□□□□□ -1.08
VPS52-220ENST00000493674 TIMM17BO60830 172 aa8.33□□□□□ -1.08
VPS52-220ENST00000493674 PRSS2P07478 247 aa8.33□□□□□ -1.08
VPS52-220ENST00000493674 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
VPS52-220ENST00000493674 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
VPS52-220ENST00000493674 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
VPS52-220ENST00000493674 C6orf226Q5I0X4 101 aa8.32□□□□□ -1.08
VPS52-220ENST00000493674 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
VPS52-220ENST00000493674 SNHG12Q9BXW3 62 aa8.32□□□□□ -1.08
VPS52-220ENST00000493674 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
VPS52-220ENST00000493674 M0R2N4 97 aa8.31□□□□□ -1.08
VPS52-220ENST00000493674 SCGB1D4Q6XE38 83 aa8.31□□□□□ -1.08
VPS52-220ENST00000493674 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
VPS52-220ENST00000493674 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
VPS52-220ENST00000493674 WFDC2Q14508 124 aa8.3□□□□□ -1.08
VPS52-220ENST00000493674 TAL2Q16559 108 aa8.3□□□□□ -1.08
VPS52-220ENST00000493674 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
VPS52-220ENST00000493674 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
VPS52-220ENST00000493674 ZNF561-AS1K7EIQ3 104 aa8.29□□□□□ -1.08
VPS52-220ENST00000493674 CKS1BP61024 79 aa8.29□□□□□ -1.08
VPS52-220ENST00000493674 C10orf25Q5T742 122 aa8.29□□□□□ -1.08
VPS52-220ENST00000493674 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
VPS52-220ENST00000493674 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
VPS52-220ENST00000493674 TMEM238C9JI98 176 aa8.28□□□□□ -1.08
VPS52-220ENST00000493674 HSD52Q0P140 79 aa8.28□□□□□ -1.08
VPS52-220ENST00000493674 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
VPS52-220ENST00000493674 UNQ6190/PRO20217Q6UXQ8 127 aa8.28□□□□□ -1.08
VPS52-220ENST00000493674 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
VPS52-220ENST00000493674 TRBV30A0A0K0K1B3 111 aa8.27□□□□□ -1.09
VPS52-220ENST00000493674 PSCAO43653 123 aa8.27□□□□□ -1.09
VPS52-220ENST00000493674 SLPIP03973 132 aa8.27□□□□□ -1.09
VPS52-220ENST00000493674 Q6ZVH6 145 aa8.27□□□□□ -1.09
VPS52-220ENST00000493674 PPDPFQ9H3Y8 114 aa8.27□□□□□ -1.09
VPS52-220ENST00000493674 C6orf48Q9UBA6 75 aa8.27□□□□□ -1.09
VPS52-220ENST00000493674 HECTD4Q9Y4D8 3996 aa8.27□□□□□ -1.09
VPS52-220ENST00000493674 SMIM13P0DJ93 91 aa8.26□□□□□ -1.09
VPS52-220ENST00000493674 PTTG1IPP53801 180 aa8.26□□□□□ -1.09
VPS52-220ENST00000493674 COX17Q14061 63 aa8.26□□□□□ -1.09
VPS52-220ENST00000493674 RNF151Q2KHN1 245 aa8.26□□□□□ -1.09
VPS52-220ENST00000493674 Q6ZRU5 148 aa8.26□□□□□ -1.09
VPS52-220ENST00000493674 CAMK2N2Q96S95 79 aa8.26□□□□□ -1.09
VPS52-220ENST00000493674 DNAH11Q96DT5 4516 aa8.25□□□□□ -1.09
VPS52-220ENST00000493674 LECT2O14960 151 aa8.25□□□□□ -1.09
VPS52-220ENST00000493674 CNBPP62633 177 aaKnown RBP8.25□□□□□ -1.09
VPS52-220ENST00000493674 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
VPS52-220ENST00000493674 CIRBPQ14011 172 aaKnown RBP8.25□□□□□ -1.09
VPS52-220ENST00000493674 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
VPS52-220ENST00000493674 MEIG1Q5JSS6 88 aa8.25□□□□□ -1.09
VPS52-220ENST00000493674 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
VPS52-220ENST00000493674 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
VPS52-220ENST00000493674 BVES-AS1Q5T3Y7 98 aa8.24□□□□□ -1.09
VPS52-220ENST00000493674 CEND1Q8N111 149 aa8.24□□□□□ -1.09
VPS52-220ENST00000493674 HIST1H4GQ99525 98 aa8.24□□□□□ -1.09
VPS52-220ENST00000493674 FAT2Q9NYQ8 4349 aa8.24□□□□□ -1.09
VPS52-220ENST00000493674 LOC107984156A0A0G2JMH3 177 aa8.23□□□□□ -1.09
VPS52-220ENST00000493674 IFITM1P13164 125 aa8.23□□□□□ -1.09
VPS52-220ENST00000493674 ARL17AQ8IVW1 177 aa8.23□□□□□ -1.09
VPS52-220ENST00000493674 CARD19Q96LW7 228 aa8.23□□□□□ -1.09
VPS52-220ENST00000493674 A0A087WTM6 91 aa8.22□□□□□ -1.09
VPS52-220ENST00000493674 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
VPS52-220ENST00000493674 TLX1NBP0CAT3 122 aa8.22□□□□□ -1.09
VPS52-220ENST00000493674 HINT1P49773 126 aaPredicted RBP8.22□□□□□ -1.09
VPS52-220ENST00000493674 FXYD2P54710 66 aa8.22□□□□□ -1.09
VPS52-220ENST00000493674 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
VPS52-220ENST00000493674 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
VPS52-220ENST00000493674 MIR7-3HGQ8N6C7 128 aa8.22□□□□□ -1.09
VPS52-220ENST00000493674 DAND5Q8N907 189 aa8.22□□□□□ -1.09
VPS52-220ENST00000493674 RTL8CO15255 209 aa8.21□□□□□ -1.1
VPS52-220ENST00000493674 PFN2P35080 140 aa8.21□□□□□ -1.1
VPS52-220ENST00000493674 PCP4P48539 62 aa8.21□□□□□ -1.1
VPS52-220ENST00000493674 LINC00158P58513 81 aa8.21□□□□□ -1.1
VPS52-220ENST00000493674 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
VPS52-220ENST00000493674 PKD1P98161 4303 aa8.21□□□□□ -1.1
VPS52-220ENST00000493674 A0A0U1RRA0 63 aa8.2□□□□□ -1.1
VPS52-220ENST00000493674 GCSHP23434 173 aa8.2□□□□□ -1.1
VPS52-220ENST00000493674 COL5A1-AS1Q5SY13 56 aa8.2□□□□□ -1.1
VPS52-220ENST00000493674 MUSTN1Q8IVN3 82 aa8.2□□□□□ -1.1
VPS52-220ENST00000493674 Q8N814 137 aa8.2□□□□□ -1.1
VPS52-220ENST00000493674 A0A1B0GWB2 263 aa8.19□□□□□ -1.1
VPS52-220ENST00000493674 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
VPS52-220ENST00000493674 RPL24P83731 157 aaKnown RBP8.18□□□□□ -1.1
VPS52-220ENST00000493674 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
VPS52-220ENST00000493674 COPS9Q8WXC6 57 aa8.18□□□□□ -1.1
VPS52-220ENST00000493674 SND1-IT1Q9HBX3 110 aa8.18□□□□□ -1.1
VPS52-220ENST00000493674 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
VPS52-220ENST00000493674 A4D1N5 150 aa8.17□□□□□ -1.1
VPS52-220ENST00000493674 C21orf62-AS1Q17RA5 79 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms